Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27601 | Soybean | nucleus | 96.03 | 95.9 |
| CDX90879 | Canola | nucleus | 75.79 | 77.37 |
| CDY16639 | Canola | nucleus | 77.29 | 77.08 |
| CDX94586 | Canola | nucleus | 77.15 | 77.05 |
| CDY21319 | Canola | nucleus | 75.38 | 76.96 |
| CDX98703 | Canola | nucleus | 73.05 | 76.83 |
| CDY27417 | Canola | nucleus | 74.97 | 76.75 |
| CDX94054 | Canola | nucleus | 72.78 | 76.55 |
| Bra029527.1-P | Field mustard | nucleus | 77.7 | 76.24 |
| AT4G04890.1 | Thale cress | nucleus | 77.29 | 76.04 |
| Bra000807.1-P | Field mustard | nucleus | 61.97 | 75.88 |
| CDX76399 | Canola | nucleus | 74.01 | 75.66 |
| AT4G21750.3 | Thale cress | nucleus | 78.39 | 75.2 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 67.85 | 75.15 |
| KRH56105 | Soybean | nucleus | 73.73 | 73.94 |
| CDY66622 | Canola | nucleus | 73.87 | 73.87 |
| Bra038757.1-P | Field mustard | nucleus | 73.19 | 73.79 |
| CDX79091 | Canola | nucleus | 74.97 | 73.46 |
| KRH13175 | Soybean | cytosol | 17.78 | 73.45 |
| Bra020872.1-P | Field mustard | nucleus | 74.97 | 73.26 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 58.69 | 73.21 |
| Bra013556.1-P | Field mustard | nucleus | 67.03 | 71.01 |
| KRH25398 | Soybean | plastid | 73.05 | 70.17 |
| KRH22554 | Soybean | nucleus | 73.87 | 69.14 |
| KRH26803 | Soybean | nucleus | 73.6 | 68.89 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 68.4 | 68.87 |
| EES11464 | Sorghum | nucleus | 73.32 | 67.93 |
| EES13460 | Sorghum | mitochondrion, nucleus | 71.27 | 66.71 |
| Zm00001d049443_P005 | Maize | nucleus | 71.96 | 66.08 |
| GSMUA_Achr10P... | Banana | nucleus | 64.57 | 66.01 |
| Zm00001d002234_P003 | Maize | nucleus | 70.59 | 64.99 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 68.67 | 64.77 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 68.67 | 64.69 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 68.67 | 64.61 |
| Os08t0136100-01 | Rice | nucleus | 69.36 | 64.59 |
| GSMUA_Achr11P... | Banana | plastid | 69.63 | 64.51 |
| KRG91238 | Soybean | nucleus | 64.02 | 64.02 |
| Zm00001d026351_P003 | Maize | nucleus | 72.37 | 62.68 |
| Zm00001d000247_P001 | Maize | plasma membrane | 61.42 | 62.45 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 67.58 | 62.06 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 67.44 | 61.93 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 67.31 | 61.65 |
| EES14500 | Sorghum | nucleus | 67.99 | 61.06 |
| Zm00001d024701_P001 | Maize | nucleus | 66.48 | 60.98 |
| KRH35579 | Soybean | nucleus | 63.47 | 59.64 |
| KRH38939 | Soybean | nucleus | 48.7 | 49.31 |
| KRH09477 | Soybean | nucleus | 48.29 | 49.16 |
| KRH35356 | Soybean | nucleus | 51.03 | 48.76 |
| KRG91457 | Soybean | nucleus | 51.44 | 48.39 |
| KRH48236 | Soybean | nucleus | 54.58 | 48.13 |
| KRH60596 | Soybean | nucleus | 46.65 | 47.83 |
| KRH41898 | Soybean | nucleus | 47.06 | 47.71 |
| KRH65144 | Soybean | nucleus | 54.17 | 47.37 |
| KRH40539 | Soybean | nucleus | 53.08 | 47.32 |
| KRH00641 | Soybean | nucleus | 53.08 | 47.2 |
| KRH38560 | Soybean | nucleus | 47.74 | 44.97 |
| Os08t0187500-01 | Rice | nucleus | 19.97 | 44.79 |
| KRH09109 | Soybean | plastid | 46.92 | 44.26 |
| KRH47277 | Soybean | nucleus | 43.5 | 42.34 |
| KRH44348 | Soybean | nucleus | 43.23 | 42.25 |
| KRH74360 | Soybean | nucleus | 44.73 | 41.44 |
| KRH23432 | Soybean | plastid | 43.09 | 41.34 |
| KRH09884 | Soybean | plastid | 42.13 | 41.01 |
| KRH39579 | Soybean | nucleus | 44.46 | 40.62 |
| KRH11810 | Soybean | nucleus | 37.89 | 38.85 |
| KRH36827 | Soybean | nucleus | 37.35 | 38.5 |
| KRH22254 | Soybean | cytosol | 27.91 | 38.13 |
| KRH36826 | Soybean | nucleus | 34.75 | 35.62 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 16.01 | 35.45 |
| KRH42428 | Soybean | nucleus | 32.15 | 31.04 |
| KRH42429 | Soybean | cytosol | 28.32 | 28.36 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100815499 | MapMan:15.5.3.3 | EMBL:ACUP02000685 | ncoils:Coil | EnsemblPlantsGene:GLYMA_01G240100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | UniProt:I1JAV7 | InterPro:IPR001356 | InterPro:IPR002913 | EnsemblPlants:KRH77881 | ProteinID:KRH77881 |
| ProteinID:KRH77881.1 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF320 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START_lipid-bd_dom | UniParc:UPI0002337A18 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:56405781..56408995
Molecular Weight (calculated)
80344.5 Da
IEP (calculated)
6.278
GRAVY (calculated)
-0.342
Length
731 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDTNMFDSH PHLLDMSPPH KTTCSESDLA KPCRDDEYET KSITDTMDAP SGDDQDPNPR PKKKGYRRHT QRQIEEMEAF FKQCPHPDDK QRKELSRELG
101: LEPLQVKFWF QNKRTQMKTQ HERNENAILK AENEKLRAEN SRYKEALTNA TCPNCGGPAA LGEMSFDEQH LRIENARLRE EIDRISGIAA KYVGKPVTSS
201: YSNLSSLNNN HVPVGNYGSQ SGTVGEMYGG SDLFRPLPAP ADADKPMIVE LAVAAMEELT RLAQAGEPLW VPSNHHSEIL NEDEYLRTFP TRGLGPKPLG
301: LRSEASRESV VVIMNHINLI DILMDVNQWS TVFCGIVSRA LTLEVLSTGI AGNYNGALQV MSSEFQVASP LVPTRENYFV RYCKQQPDGI WAVVDVSLDN
401: LRPSTISRSR RRPSGCLIQE LPNGYSKVTW IEHVEVDDRA VHSIYRTLVN SGLAFGAKRW VATLERQCER LASSMANNIP AGDLCVITSA EGRKSMMKLA
501: ERMVMSYCTG VGASTAHAWT TLSATGCDDV RVMTRKSTDE PGRPPGIVLS AATSFWLPVP PKRVFHFLRD QNSRNEWDIL SNGGLVQELA HIANGRDPGN
601: CVSLLRVNSA NSSQSNMLIL QESCTDSTGS YVVYAPVDIV AMNVVLSGGD PDYVALLPSG FAILPDGPPA LNGGPIHDVG SGGSLLTVAF QILVDSAPTA
701: KLSLGSVATV NSLIKCTVER IKVAVIRDNT T
101: LEPLQVKFWF QNKRTQMKTQ HERNENAILK AENEKLRAEN SRYKEALTNA TCPNCGGPAA LGEMSFDEQH LRIENARLRE EIDRISGIAA KYVGKPVTSS
201: YSNLSSLNNN HVPVGNYGSQ SGTVGEMYGG SDLFRPLPAP ADADKPMIVE LAVAAMEELT RLAQAGEPLW VPSNHHSEIL NEDEYLRTFP TRGLGPKPLG
301: LRSEASRESV VVIMNHINLI DILMDVNQWS TVFCGIVSRA LTLEVLSTGI AGNYNGALQV MSSEFQVASP LVPTRENYFV RYCKQQPDGI WAVVDVSLDN
401: LRPSTISRSR RRPSGCLIQE LPNGYSKVTW IEHVEVDDRA VHSIYRTLVN SGLAFGAKRW VATLERQCER LASSMANNIP AGDLCVITSA EGRKSMMKLA
501: ERMVMSYCTG VGASTAHAWT TLSATGCDDV RVMTRKSTDE PGRPPGIVLS AATSFWLPVP PKRVFHFLRD QNSRNEWDIL SNGGLVQELA HIANGRDPGN
601: CVSLLRVNSA NSSQSNMLIL QESCTDSTGS YVVYAPVDIV AMNVVLSGGD PDYVALLPSG FAILPDGPPA LNGGPIHDVG SGGSLLTVAF QILVDSAPTA
701: KLSLGSVATV NSLIKCTVER IKVAVIRDNT T
001: MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
Arabidopsis Description
ATML1ATML1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ61]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.