CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23432	Soybean	plastid	95.74	94.36
VIT_09s0002g04340.t01	Wine grape	nucleus	81.36	81.47
KRH47277	Soybean	nucleus	80.56	80.56
KRH44348	Soybean	nucleus	78.83	79.14
GSMUA_Achr3P15400_001	Banana	nucleus	68.31	68.49
PGSC0003DMT400006770	Potato	nucleus	69.91	68.01
Solyc03g120620.2.1	Tomato	nucleus	69.24	67.1
Bra003535.1-P	Field mustard	nucleus	64.98	65.07
GSMUA_Achr8P27340_001	Banana	nucleus	64.45	64.62
Os01t0760800-00	Rice	nucleus	11.45	64.18
AT1G79840.2	Thale cress	nucleus, plastid	66.05	63.92
CDX79408	Canola	nucleus	64.98	62.56
CDX67929	Canola	nucleus	65.11	62.45
TraesCS3B01G331200.1	Wheat	nucleus	54.86	54.57
HORVU0Hr1G006920.1	Barley	nucleus	7.19	54.55
HORVU3Hr1G073290.1	Barley	nucleus	47.4	54.27
TraesCS3A01G305300.1	Wheat	nucleus	54.86	54.14
TraesCS3D01G296500.3	Wheat	nucleus	50.73	47.98
OQU87592	Sorghum	nucleus	45.01	47.54
KRH13175	Soybean	cytosol	10.52	44.63
KRH56105	Soybean	nucleus	42.61	43.9
KRH25398	Soybean	plastid	43.01	42.44
KRH77881	Soybean	nucleus	41.01	42.13
KRH40539	Soybean	nucleus	45.54	41.71
KRH27601	Soybean	nucleus	40.61	41.67
KRH22554	Soybean	nucleus	43.01	41.36
KRH26803	Soybean	nucleus	43.01	41.36
KRH00641	Soybean	nucleus	45.14	41.24
KRH48236	Soybean	nucleus	45.41	41.13
KRH35356	Soybean	nucleus	41.68	40.91
KRH65144	Soybean	nucleus	45.27	40.67
KRG91457	Soybean	nucleus	41.94	40.54
KRH41898	Soybean	nucleus	38.08	39.67
KRH09477	Soybean	nucleus	37.82	39.55
KRH38939	Soybean	nucleus	37.95	39.47
KRH60596	Soybean	nucleus	37.28	39.27
KRG91238	Soybean	nucleus	37.42	38.44
KRH09109	Soybean	plastid	39.41	38.19
KRH38560	Soybean	nucleus	39.01	37.76
KRH35579	Soybean	nucleus	37.68	36.38
KRH74360	Soybean	nucleus	37.15	35.36
KRH39579	Soybean	nucleus	37.42	35.12
KRH11810	Soybean	nucleus	31.29	32.96
KRH36826	Soybean	nucleus	30.76	32.4
KRH36827	Soybean	nucleus	30.49	32.3
KRH22254	Soybean	cytosol	22.5	31.59
KRH27078	Soybean	extracellular, golgi, peroxisome	13.45	30.61
KRH42428	Soybean	nucleus	29.29	29.06
KRH42429	Soybean	cytosol	24.77	25.48

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100809926	MapMan:15.5.3.3	EMBL:ACUP02009113	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G016500
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0008289	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	UniProt:I1MCR0	InterPro:IPR001356	InterPro:IPR002913	EnsemblPlants:KRH09884	ProteinID:KRH09884
ProteinID:KRH09884.1	PFAM:PF00046	PFAM:PF01852	ScanProsite:PS00027	PFscan:PS50071	PFscan:PS50848
PANTHER:PTHR24326	PANTHER:PTHR24326:SF482	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961
InterPro:START_lipid-bd_dom	UniParc:UPI00023D21DC	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:1275248..1281670

Molecular Weight (calculated)

83594.1 Da

IEP (calculated)

6.075

GRAVY (calculated)

-0.425

Length

751 amino acids

Sequence
(BLAST)

001: MAADMSNNNN PPPTSHAKDF FASPALSLSL AGIFRHAGVA AADEAATSVE EGEECERLDD ISSENSGPTR SRSEDDFEVE AEHEDDDADG DKNKNKKRKK
101: YHRHTADQIK EMEALFKESP HPDEKQRQQL SKQLGLAPRQ VKFWFQNRRT QIKAIQERHE NSLLKSEIEK LKEKNKTLRE TINKACCPNC GVPTTSRDGA
201: MPTEEQQLRI ENAKLKAEVE KLRAVLGKYA PGSTSPSCSS GHDQENRSSL DFYTGIFGLD KSRIMDTVNQ AMEELIKMAT VGEPLWLRSF ETGREILNYD
301: EYVREFAVEN SSSGKPRRSI EASRDTAVVF VDLPRLVQSF LDVNQWKEMF PCLISKAATV DVICNGEGPG RNGAVQLMFA ELQMLTPMVP TREVYFVRFC
401: KQLSAEQWAI VDVSIDKVED NIDASLVKCR KRPSGCIIED KSNGHCKVIW VEHLECQKSA VHSMYRTIVN SGLAFGARHW IATLQLQCER LVFFMATNVP
501: MKDSTGVATL AGRKSILKLA QRMTWSFCHA IGASSFHTWT KFTSKTGEDI RISSRKNLND PGEPLGLILC AVCSVWLPVS PNVLFDFLRD ETRRTEWDIM
601: SSGGTVQSIA NLAKGQDRGN AVAIQTIKSK ENSVWILQDS YTNPYESMVV YASVDITGTQ SVMTGCDSSN LAILPSGFSI IPDGLESRPL VISSRQEEKN
701: TEGGSLFTMA FQILTNASPA AKLTMESVDS VNTLVSCTLR NIRTSLQCED G

Best Arabidopsis Sequence Match ( AT1G79840.1 )
(BLAST)

001: MSMAVDMSSK QPTKDFFSSP ALSLSLAGIF RNASSGSTNP EEDFLGRRVV DDEDRTVEMS SENSGPTRSR SEEDLEGEDH DDEEEEEEDG AAGNKGTNKR
101: KRKKYHRHTT DQIRHMEALF KETPHPDEKQ RQQLSKQLGL APRQVKFWFQ NRRTQIKAIQ ERHENSLLKA ELEKLREENK AMRESFSKAN SSCPNCGGGP
201: DDLHLENSKL KAELDKLRAA LGRTPYPLQA SCSDDQEHRL GSLDFYTGVF ALEKSRIAEI SNRATLELQK MATSGEPMWL RSVETGREIL NYDEYLKEFP
301: QAQASSFPGR KTIEASRDAG IVFMDAHKLA QSFMDVGQWK ETFACLISKA ATVDVIRQGE GPSRIDGAIQ LMFGEMQLLT PVVPTREVYF VRSCRQLSPE
401: KWAIVDVSVS VEDSNTEKEA SLLKCRKLPS GCIIEDTSNG HSKVTWVEHL DVSASTVQPL FRSLVNTGLA FGARHWVATL QLHCERLVFF MATNVPTKDS
501: LGVTTLAGRK SVLKMAQRMT QSFYRAIAAS SYHQWTKITT KTGQDMRVSS RKNLHDPGEP TGVIVCASSS LWLPVSPALL FDFFRDEARR HEWDALSNGA
601: HVQSIANLSK GQDRGNSVAI QTVKSREKSI WVLQDSSTNS YESVVVYAPV DINTTQLVLA GHDPSNIQIL PSGFSIIPDG VESRPLVITS TQDDRNSQGG
701: SLLTLALQTL INPSPAAKLN MESVESVTNL VSVTLHNIKR SLQIEDC

Arabidopsis Description

GL2HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HQC0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.