Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11810 | Soybean | nucleus | 48.53 | 48.53 |
| KRH36827 | Soybean | nucleus | 48.11 | 48.38 |
| Os06t0208100-00 | Rice | nucleus | 8.7 | 48.06 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 45.44 | 45.38 |
| Solyc09g057530.1.1 | Tomato | cytosol | 7.99 | 41.61 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 33.66 | 39.8 |
| Zm00001d018225_P001 | Maize | nucleus | 38.29 | 39.45 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 37.87 | 39.42 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 37.73 | 39.27 |
| CDY62389 | Canola | cytosol | 26.65 | 38.85 |
| Zm00001d052133_P001 | Maize | nucleus | 38.01 | 38.83 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 37.03 | 38.77 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 37.87 | 38.74 |
| KRH09477 | Soybean | nucleus | 38.99 | 38.72 |
| GSMUA_Achr10P... | Banana | nucleus | 38.57 | 38.68 |
| KRH38939 | Soybean | nucleus | 39.13 | 38.64 |
| KRH42428 | Soybean | nucleus | 40.81 | 38.44 |
| EES05874 | Sorghum | nucleus | 38.01 | 38.33 |
| GSMUA_Achr10P... | Banana | nucleus | 36.47 | 38.12 |
| Solyc09g066070.2.1 | Tomato | cytosol | 23.0 | 38.05 |
| KRH60596 | Soybean | nucleus | 38.01 | 38.01 |
| Solyc11g011940.1.1 | Tomato | nucleus | 38.15 | 37.94 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 39.27 | 37.89 |
| CDX85461 | Canola | cytosol | 37.45 | 37.87 |
| Bra023611.1-P | Field mustard | nucleus | 37.31 | 37.73 |
| KRH41898 | Soybean | nucleus | 38.15 | 37.73 |
| PGSC0003DMT400085057 | Potato | cytosol | 25.11 | 37.45 |
| PGSC0003DMT400051268 | Potato | cytosol | 26.09 | 37.27 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 38.29 | 37.09 |
| PGSC0003DMT400038820 | Potato | extracellular | 18.93 | 37.09 |
| Solyc09g057540.2.1 | Tomato | cytosol | 25.67 | 36.82 |
| Zm00001d037140_P004 | Maize | nucleus | 35.2 | 36.54 |
| AT3G03260.1 | Thale cress | nucleus | 35.76 | 36.48 |
| Solyc04g025490.1.1 | Tomato | cytosol | 12.34 | 36.36 |
| Zm00001d044973_P001 | Maize | nucleus | 35.06 | 36.28 |
| Solyc09g060130.1.1 | Tomato | cytosol | 22.58 | 36.26 |
| Solyc09g066030.1.1 | Tomato | nucleus | 36.75 | 36.24 |
| Solyc09g066050.2.1 | Tomato | cytosol | 28.05 | 36.17 |
| EER89393 | Sorghum | nucleus | 35.48 | 36.14 |
| Bra032003.1-P | Field mustard | nucleus | 34.92 | 36.14 |
| CDY02713 | Canola | nucleus | 37.31 | 35.99 |
| CDY43137 | Canola | nucleus | 34.78 | 35.99 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 18.51 | 35.87 |
| CDY42301 | Canola | nucleus | 34.64 | 35.8 |
| Solyc07g026560.1.1 | Tomato | cytosol | 23.7 | 35.73 |
| Bra003213.1-P | Field mustard | nucleus | 35.48 | 35.63 |
| CDY53691 | Canola | nucleus | 35.48 | 35.63 |
| Bra020066.1-P | Field mustard | nucleus | 33.94 | 35.48 |
| PGSC0003DMT400051266 | Potato | cytosol | 19.35 | 35.48 |
| Solyc09g060170.1.1 | Tomato | cytosol | 17.11 | 35.47 |
| Solyc11g022420.1.1 | Tomato | cytosol | 23.7 | 35.28 |
| Bra008562.1-P | Field mustard | cytosol, nucleus, plastid | 35.76 | 35.27 |
| KRH56105 | Soybean | nucleus | 36.04 | 35.25 |
| CDY44946 | Canola | nucleus | 31.84 | 35.03 |
| Solyc10g018030.1.1 | Tomato | cytosol | 20.2 | 34.87 |
| CDY67945 | Canola | nucleus | 33.66 | 34.83 |
| KRH77881 | Soybean | nucleus | 35.62 | 34.75 |
| KRH27601 | Soybean | nucleus | 35.48 | 34.56 |
| KRH13175 | Soybean | cytosol | 8.56 | 34.46 |
| Solyc08g062510.2.1 | Tomato | nucleus | 31.56 | 34.46 |
| AT5G17320.1 | Thale cress | nucleus | 34.64 | 34.4 |
| Solyc05g015030.1.1 | Tomato | cytosol | 22.86 | 34.39 |
| AT1G34650.1 | Thale cress | nucleus | 33.94 | 34.18 |
| CDY49937 | Canola | nucleus | 33.24 | 34.15 |
| CDY21211 | Canola | nucleus | 33.1 | 34.01 |
| Bra021363.1-P | Field mustard | nucleus | 34.64 | 33.98 |
| CDY16938 | Canola | nucleus | 31.42 | 33.94 |
| KRH25398 | Soybean | plastid | 36.19 | 33.9 |
| CDY69499 | Canola | cytosol | 14.45 | 33.88 |
| Solyc07g037910.1.1 | Tomato | cytosol | 9.96 | 33.65 |
| Os06t0207966-00 | Rice | plastid | 12.34 | 33.46 |
| KRH42429 | Soybean | cytosol | 34.08 | 33.29 |
| KRH26803 | Soybean | nucleus | 36.19 | 33.03 |
| KRH22554 | Soybean | nucleus | 36.04 | 32.91 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 32.12 | 32.76 |
| KRG91238 | Soybean | nucleus | 33.52 | 32.69 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 33.24 | 32.69 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 33.24 | 32.47 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 33.1 | 32.24 |
| Solyc10g018020.1.1 | Tomato | extracellular | 15.15 | 32.14 |
| Solyc07g026570.1.1 | Tomato | nucleus | 6.31 | 31.91 |
| PGSC0003DMT400036411 | Potato | nucleus | 23.42 | 31.81 |
| KRH38560 | Soybean | nucleus | 34.36 | 31.57 |
| Solyc08g062520.2.1 | Tomato | cytosol | 22.58 | 31.51 |
| KRH47277 | Soybean | nucleus | 32.54 | 30.89 |
| KRH74360 | Soybean | nucleus | 34.08 | 30.8 |
| KRH09884 | Soybean | plastid | 32.4 | 30.76 |
| KRH09109 | Soybean | plastid | 33.38 | 30.71 |
| KRH23432 | Soybean | plastid | 32.82 | 30.71 |
| KRH00641 | Soybean | nucleus | 35.06 | 30.41 |
| KRH39579 | Soybean | nucleus | 33.94 | 30.25 |
| KRH44348 | Soybean | nucleus | 31.56 | 30.08 |
| KRH40539 | Soybean | nucleus | 34.5 | 30.0 |
| KRH35356 | Soybean | nucleus | 31.98 | 29.8 |
| KRG91457 | Soybean | nucleus | 32.26 | 29.6 |
| KRH35579 | Soybean | nucleus | 32.26 | 29.56 |
| KRH48236 | Soybean | nucleus | 34.36 | 29.55 |
| Solyc04g025480.1.1 | Tomato | cytosol | 26.93 | 29.31 |
| KRH65144 | Soybean | nucleus | 33.52 | 28.59 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 12.76 | 27.58 |
| KRH22254 | Soybean | cytosol | 19.64 | 26.17 |
| TraesCSU01G150000.1 | Wheat | nucleus | 7.15 | 23.39 |
| TraesCSU01G244000.1 | Wheat | nucleus | 5.47 | 18.93 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 2.38 | 14.29 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100794552 | MapMan:15.5.3.3 | EMBL:ACUP02005397 | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G025800 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | UniProt:I1L0G6 | InterPro:IPR001356 | InterPro:IPR002913 | EnsemblPlants:KRH36826 | ProteinID:KRH36826 |
| ProteinID:KRH36826.1 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF343 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START_lipid-bd_dom | UniParc:UPI000296A457 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:2100876..2109846
Molecular Weight (calculated)
81364.6 Da
IEP (calculated)
7.867
GRAVY (calculated)
-0.433
Length
713 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFAMGAAGG SGDDQHNQSL NKGKKTTTYR RHKEDQRTRL EELFRKCPNP DEIERRQIAK DLGLEPKQVK FWFQNKRTQK KTISERVDNN VLRVENERMH
101: NENLVLREAL KTIICPSCGG PHNEEERREL CLEQLRLENA RLKAQHEKLS KFLVQHMDKP ILEQNLDSPI RGSSSHGPLL GSSLRLRAGR SRMNLGASTS
201: HDSFQDEEDT MSSQAGSKII TQMEKTMMAH IAVAAKDELL KLLRTNEPLW VKSSTDQRYV LHLECYETIF PRINHFKNSK ARVESSKDSR IVRIKAKELV
301: DMLLNSEIWE NLFSRIVTKA RTIQVLENGS LENRSGVLLL MREEMHVLSP LVPSREFYFL RYCHQVEANV WVIADVSVDC MKENNHDPNC WRFPSGCMIQ
401: GISNGMCQVS WVEHVEVDEK IQTHHLFKDL VNRNIAYGAE RWLLELQRMC ERFTSLEVEY IPNYDIGGVI TTLGGRMSMM KFSHQMVKSF YGILNMSSIT
501: DFPQHLADEN TGIRICARKV TNSNQSNPNI IITATTSFRL PLPSQNVFDF FRDPIRRVKW DAMCYKRPLH EIARISTGTH PNNYISIIQP IHPTANNVVI
601: IQESCTDPLG SYVVYSSTNI LDIKRTINGE DSSTMPFFPS GIVISEEGQS ITNARASSSG NGDVRTRGSL LTVAFQILMN SSPTMMMEFV TVVNSLITST
701: VENINDALIS SFN
101: NENLVLREAL KTIICPSCGG PHNEEERREL CLEQLRLENA RLKAQHEKLS KFLVQHMDKP ILEQNLDSPI RGSSSHGPLL GSSLRLRAGR SRMNLGASTS
201: HDSFQDEEDT MSSQAGSKII TQMEKTMMAH IAVAAKDELL KLLRTNEPLW VKSSTDQRYV LHLECYETIF PRINHFKNSK ARVESSKDSR IVRIKAKELV
301: DMLLNSEIWE NLFSRIVTKA RTIQVLENGS LENRSGVLLL MREEMHVLSP LVPSREFYFL RYCHQVEANV WVIADVSVDC MKENNHDPNC WRFPSGCMIQ
401: GISNGMCQVS WVEHVEVDEK IQTHHLFKDL VNRNIAYGAE RWLLELQRMC ERFTSLEVEY IPNYDIGGVI TTLGGRMSMM KFSHQMVKSF YGILNMSSIT
501: DFPQHLADEN TGIRICARKV TNSNQSNPNI IITATTSFRL PLPSQNVFDF FRDPIRRVKW DAMCYKRPLH EIARISTGTH PNNYISIIQP IHPTANNVVI
601: IQESCTDPLG SYVVYSSTNI LDIKRTINGE DSSTMPFFPS GIVISEEGQS ITNARASSSG NGDVRTRGSL LTVAFQILMN SSPTMMMEFV TVVNSLITST
701: VENINDALIS SFN
001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RSANSSQSNM LILQESCTDP TASFVIYAPV DIVAMNIVLN GGDPDYVALL PSGFAILPDG NANSGAPGGD GGSLLTVAFQ ILVDSVPTAK LSLGSVATVN
701: NLIACTVERI KASMSCETA
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RSANSSQSNM LILQESCTDP TASFVIYAPV DIVAMNIVLN GGDPDYVALL PSGFAILPDG NANSGAPGGD GGSLLTVAFQ ILVDSVPTAK LSLGSVATVN
701: NLIACTVERI KASMSCETA
Arabidopsis Description
HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.