Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53691 | Canola | nucleus | 73.33 | 68.17 |
| CDX85461 | Canola | cytosol | 71.52 | 66.95 |
| CDY02713 | Canola | nucleus | 72.73 | 64.95 |
| CDY62389 | Canola | cytosol | 46.97 | 63.39 |
| Os06t0208100-00 | Rice | nucleus | 11.52 | 58.91 |
| AT1G34650.1 | Thale cress | nucleus | 57.88 | 53.95 |
| AT5G17320.1 | Thale cress | nucleus | 56.06 | 51.53 |
| CDY69499 | Canola | cytosol | 21.82 | 47.37 |
| CDY44946 | Canola | nucleus | 42.42 | 43.21 |
| CDY42301 | Canola | nucleus | 44.85 | 42.9 |
| CDY43137 | Canola | nucleus | 44.39 | 42.53 |
| CDY67945 | Canola | nucleus | 43.94 | 42.09 |
| CDY49937 | Canola | nucleus | 43.94 | 41.79 |
| Solyc09g057530.1.1 | Tomato | cytosol | 8.64 | 41.61 |
| CDY21211 | Canola | nucleus | 43.64 | 41.5 |
| PGSC0003DMT400038820 | Potato | extracellular | 22.42 | 40.66 |
| CDY42097 | Canola | nucleus | 30.15 | 38.49 |
| Solyc04g025490.1.1 | Tomato | cytosol | 14.09 | 38.43 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 41.52 | 38.38 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 33.79 | 36.98 |
| Solyc07g037910.1.1 | Tomato | cytosol | 11.82 | 36.97 |
| Solyc05g015030.1.1 | Tomato | cytosol | 26.06 | 36.29 |
| PGSC0003DMT400051266 | Potato | cytosol | 21.36 | 36.25 |
| Solyc10g018030.1.1 | Tomato | cytosol | 22.42 | 35.84 |
| CDY26204 | Canola | nucleus | 33.79 | 35.01 |
| Solyc09g066070.2.1 | Tomato | cytosol | 22.73 | 34.8 |
| Solyc07g026570.1.1 | Tomato | nucleus | 7.42 | 34.75 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 35.61 | 34.51 |
| Solyc11g011940.1.1 | Tomato | nucleus | 37.42 | 34.45 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 35.61 | 34.31 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 35.61 | 34.31 |
| PGSC0003DMT400051268 | Potato | cytosol | 25.91 | 34.27 |
| KRH11810 | Soybean | nucleus | 36.97 | 34.22 |
| Zm00001d018225_P001 | Maize | nucleus | 35.76 | 34.1 |
| PGSC0003DMT400085057 | Potato | cytosol | 24.55 | 33.89 |
| CDX96744 | Canola | nucleus | 34.55 | 33.88 |
| KRH36827 | Soybean | nucleus | 36.36 | 33.85 |
| GSMUA_Achr10P... | Banana | nucleus | 36.21 | 33.61 |
| Zm00001d052133_P001 | Maize | nucleus | 35.45 | 33.52 |
| CDX83884 | Canola | nucleus | 34.7 | 33.43 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 35.3 | 33.43 |
| Zm00001d037140_P004 | Maize | nucleus | 34.7 | 33.33 |
| GSMUA_Achr10P... | Banana | nucleus | 34.39 | 33.28 |
| Zm00001d044973_P001 | Maize | nucleus | 34.7 | 33.24 |
| Solyc07g026560.1.1 | Tomato | cytosol | 23.79 | 33.19 |
| CDY26205 | Canola | nucleus | 34.55 | 33.04 |
| EES05874 | Sorghum | nucleus | 35.3 | 32.96 |
| Solyc09g066050.2.1 | Tomato | cytosol | 27.58 | 32.91 |
| CDY19185 | Canola | nucleus | 33.94 | 32.84 |
| Solyc09g066030.1.1 | Tomato | nucleus | 35.76 | 32.64 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 36.36 | 32.48 |
| Solyc09g057540.2.1 | Tomato | cytosol | 24.39 | 32.39 |
| Solyc11g022420.1.1 | Tomato | cytosol | 23.48 | 32.36 |
| EER89393 | Sorghum | nucleus | 34.24 | 32.29 |
| Solyc09g060130.1.1 | Tomato | cytosol | 21.67 | 32.21 |
| CDX68229 | Canola | nucleus | 34.24 | 32.15 |
| CDY11109 | Canola | nucleus | 34.39 | 31.97 |
| CDX96471 | Canola | nucleus | 34.39 | 31.62 |
| CDY21319 | Canola | nucleus | 34.24 | 31.56 |
| Solyc08g062510.2.1 | Tomato | nucleus | 31.21 | 31.55 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 35.15 | 31.52 |
| CDX72984 | Canola | nucleus | 34.09 | 31.47 |
| CDX90879 | Canola | nucleus | 34.09 | 31.42 |
| KRH36826 | Soybean | nucleus | 33.94 | 31.42 |
| CDX76399 | Canola | nucleus | 33.64 | 31.05 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 32.88 | 31.04 |
| CDY71572 | Canola | nucleus | 18.48 | 31.04 |
| CDY27417 | Canola | nucleus | 33.33 | 30.81 |
| CDY66622 | Canola | nucleus | 33.79 | 30.51 |
| CDY16639 | Canola | nucleus | 33.64 | 30.29 |
| CDX94586 | Canola | nucleus | 33.48 | 30.19 |
| Solyc09g060170.1.1 | Tomato | cytosol | 15.61 | 29.94 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 16.67 | 29.89 |
| CDY23096 | Canola | nucleus | 5.91 | 29.55 |
| CDX98703 | Canola | nucleus | 31.06 | 29.5 |
| CDX79091 | Canola | nucleus | 33.33 | 29.49 |
| CDY06167 | Canola | nucleus | 32.12 | 29.44 |
| PGSC0003DMT400036411 | Potato | nucleus | 23.33 | 29.33 |
| CDX94054 | Canola | nucleus | 30.61 | 29.06 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 31.82 | 28.97 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 31.97 | 28.9 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 31.67 | 28.55 |
| CDY00515 | Canola | nucleus | 29.09 | 28.53 |
| CDY31916 | Canola | nucleus | 29.09 | 28.53 |
| CDY10041 | Canola | nucleus | 32.12 | 28.38 |
| CDY18903 | Canola | nucleus | 29.85 | 27.94 |
| CDY48272 | Canola | nucleus | 29.7 | 27.84 |
| CDY12213 | Canola | nucleus | 30.0 | 27.81 |
| CDX74762 | Canola | nucleus | 29.7 | 27.68 |
| Solyc10g018020.1.1 | Tomato | extracellular | 14.09 | 27.68 |
| CDX67855 | Canola | nucleus | 32.58 | 27.56 |
| Solyc04g025480.1.1 | Tomato | cytosol | 27.12 | 27.33 |
| CDY45684 | Canola | nucleus | 32.42 | 27.3 |
| CDX74347 | Canola | nucleus | 32.58 | 27.11 |
| CDY51143 | Canola | nucleus | 32.42 | 27.09 |
| CDX91894 | Canola | nucleus | 32.27 | 26.83 |
| Solyc08g062520.2.1 | Tomato | cytosol | 20.76 | 26.81 |
| KRH42428 | Soybean | nucleus | 30.61 | 26.68 |
| CDY07201 | Canola | nucleus | 31.67 | 26.52 |
| CDY49515 | Canola | plasma membrane | 32.12 | 26.14 |
| CDY19129 | Canola | nucleus | 28.64 | 26.0 |
| CDY46842 | Canola | nucleus | 32.58 | 25.9 |
| CDY15339 | Canola | nucleus | 28.18 | 25.44 |
| CDY30748 | Canola | endoplasmic reticulum | 22.58 | 25.38 |
| CDY43458 | Canola | nucleus | 31.06 | 25.25 |
| CDX77711 | Canola | nucleus | 30.91 | 24.79 |
| CDY33492 | Canola | nucleus | 29.7 | 24.62 |
| CDX79408 | Canola | nucleus | 28.64 | 24.23 |
| CDY03177 | Canola | nucleus | 30.3 | 24.21 |
| CDY08866 | Canola | nucleus | 26.97 | 24.18 |
| CDX76559 | Canola | nucleus | 26.82 | 24.11 |
| KRH42429 | Soybean | cytosol | 26.67 | 24.11 |
| CDX67929 | Canola | nucleus | 28.03 | 23.63 |
| TraesCSU01G150000.1 | Wheat | nucleus | 7.27 | 22.02 |
| CDX89416 | Canola | nucleus | 20.15 | 20.49 |
| CDY39874 | Canola | plasma membrane | 5.91 | 20.31 |
| CDX89415 | Canola | cytosol, mitochondrion | 5.45 | 20.22 |
| Os06t0207966-00 | Rice | plastid | 7.88 | 19.77 |
| CDX94443 | Canola | cytosol | 18.79 | 19.75 |
| TraesCSU01G244000.1 | Wheat | nucleus | 6.06 | 19.42 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 1.97 | 10.92 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078FX06 | UniProt:A0A078FX06 | EnsemblPlants:CDY16938 |
| ProteinID:CDY16938 | ProteinID:CDY16938.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 |
| EnsemblPlantsGene:GSBRNA2T00094860001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 |
| PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 |
| SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom |
| UniParc:UPI0004EE5889 | SEG:seg | : | : | : | : |
Description
BnaC09g40650DBnaC09g40650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FX06]
Coordinates
chrLK032068:+:464579..474564
Molecular Weight (calculated)
75703.4 Da
IEP (calculated)
8.500
GRAVY (calculated)
-0.494
Length
660 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSRDSSSS DEDETSFNTS DGDKKNYNRH SNHQIQRLEA YFKECHHPDD SQRLKLGEEL KLKPKQIKFW FQNKRTQAKT QSEKADNASL RTENMKIRRE
101: NEALQEALNT VTCPPCGGPR PGKGERALYL QNLRTHNTYL REERDRLSSL VNKSEGHSRP SFNALAYHHG PSLYASASNN PHVTYGSSSN YRVEPSSLVR
201: EPYSRERINI GQPPQPRNPI QLQRFQPLSQ MEKVTMTEAM VTAMTEVITL IQTEESMWIQ SSIDGRLVID QKNYEKTFTN PSHFKSPSSR IESSKEVAVI
301: PMDAKNLVNM LLDTEKWANL FSTIVSEAKT IHVLESMDPR RNFSKLMYEQ LHILSPLLPP REFMILRCCQ QLEEDVWVIA DVSYHQVAFE FEFETPACVK
401: RPSGCLIQAL PNGLSKVTWM EHVEVNEKVR THRIYRDLLC GGFGYGARRW TVTLERMCER LHLSSISVFP TTDLAGVVKT IEGRRSLMNL GERMLKNFAW
501: ILKMSGNYDF SQLSETNSSG VRVSVRVNSE AGQPTGLIVC AASSLCLPLS PLEVYNFLTN LEIRHQWDVL CHGYPAAEVA GFATGTDDKN RVNILQTYIY
601: KYQQILYFLA LQPLKNYKYH IVTVVPTLFL ITSLKKHYFL LHFDPASTTF EIQKERLVHK
101: NEALQEALNT VTCPPCGGPR PGKGERALYL QNLRTHNTYL REERDRLSSL VNKSEGHSRP SFNALAYHHG PSLYASASNN PHVTYGSSSN YRVEPSSLVR
201: EPYSRERINI GQPPQPRNPI QLQRFQPLSQ MEKVTMTEAM VTAMTEVITL IQTEESMWIQ SSIDGRLVID QKNYEKTFTN PSHFKSPSSR IESSKEVAVI
301: PMDAKNLVNM LLDTEKWANL FSTIVSEAKT IHVLESMDPR RNFSKLMYEQ LHILSPLLPP REFMILRCCQ QLEEDVWVIA DVSYHQVAFE FEFETPACVK
401: RPSGCLIQAL PNGLSKVTWM EHVEVNEKVR THRIYRDLLC GGFGYGARRW TVTLERMCER LHLSSISVFP TTDLAGVVKT IEGRRSLMNL GERMLKNFAW
501: ILKMSGNYDF SQLSETNSSG VRVSVRVNSE AGQPTGLIVC AASSLCLPLS PLEVYNFLTN LEIRHQWDVL CHGYPAAEVA GFATGTDDKN RVNILQTYIY
601: KYQQILYFLA LQPLKNYKYH IVTVVPTLFL ITSLKKHYFL LHFDPASTTF EIQKERLVHK
001: MDFTRDDNSS DERENDVDAN TNNRHEKKGY HRHTNEQIHR LETYFKECPH PDEFQRRLLG EELNLKPKQI KFWFQNKRTQ AKSHNEKADN AALRAENIKI
101: RRENESMEDA LNNVVCPPCG GRGPGREDQL RHLQKLRAQN AYLKDEYERV SNYLKQYGGH SMHNVEATPY LHGPSNHAST SKNRPALYGT SSNRLPEPSS
201: IFRGPYTRGN MNTTAPPQPR KPLEMQNFQP LSQLEKIAML EAAEKAVSEV LSLIQMDDTM WKKSSIDDRL VIDPGLYEKY FTKTNTNGRP ESSKDVVVVQ
301: MDAGNLIDIF LTAEKWARLF PTIVNEAKTI HVLDSVDHRG KTFSRVIYEQ LHILSPLVPP REFMILRTCQ QIEDNVWMIA DVSCHLPNIE FDLSFPICTK
401: RPSGVLIQAL PHGFSKVTWI EHVVVNDNRV RPHKLYRDLL YGGFGYGARR WTVTLERTCE RLIFSTSVPA LPNNDNPGVV QTIRGRNSVM HLGERMLRNF
501: AWMMKMVNKL DFSPQSETNN SGIRIGVRIN NEAGQPPGLI VCAGSSLSLP LPPVQVYDFL KNLEVRHQWD VLCHGNPATE AARFVTGSNP RNTVSFLEPS
601: IRDINTKLMI LQDSFKDALG GMVAYAPMDL NTACAAISGD IDPTTIPILP SGFMISRDGR PSEGEAEGGS YTLLTVAFQI LVSGPSYSPD TNLEVSATTV
701: NTLISSTVQR IKAMLKCE
101: RRENESMEDA LNNVVCPPCG GRGPGREDQL RHLQKLRAQN AYLKDEYERV SNYLKQYGGH SMHNVEATPY LHGPSNHAST SKNRPALYGT SSNRLPEPSS
201: IFRGPYTRGN MNTTAPPQPR KPLEMQNFQP LSQLEKIAML EAAEKAVSEV LSLIQMDDTM WKKSSIDDRL VIDPGLYEKY FTKTNTNGRP ESSKDVVVVQ
301: MDAGNLIDIF LTAEKWARLF PTIVNEAKTI HVLDSVDHRG KTFSRVIYEQ LHILSPLVPP REFMILRTCQ QIEDNVWMIA DVSCHLPNIE FDLSFPICTK
401: RPSGVLIQAL PHGFSKVTWI EHVVVNDNRV RPHKLYRDLL YGGFGYGARR WTVTLERTCE RLIFSTSVPA LPNNDNPGVV QTIRGRNSVM HLGERMLRNF
501: AWMMKMVNKL DFSPQSETNN SGIRIGVRIN NEAGQPPGLI VCAGSSLSLP LPPVQVYDFL KNLEVRHQWD VLCHGNPATE AARFVTGSNP RNTVSFLEPS
601: IRDINTKLMI LQDSFKDALG GMVAYAPMDL NTACAAISGD IDPTTIPILP SGFMISRDGR PSEGEAEGGS YTLLTVAFQI LVSGPSYSPD TNLEVSATTV
701: NTLISSTVQR IKAMLKCE
Arabidopsis Description
HDG9Homeobox-leucine zipper protein HDG9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFI0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.