Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023611.1-P | Field mustard | nucleus | 99.72 | 99.72 |
| CDY02713 | Canola | nucleus | 96.74 | 92.29 |
| CDY62389 | Canola | cytosol | 51.06 | 73.62 |
| CDY16938 | Canola | nucleus | 66.95 | 71.52 |
| CDY53691 | Canola | nucleus | 69.5 | 69.01 |
| CDY69499 | Canola | cytosol | 29.65 | 68.75 |
| AT1G34650.1 | Thale cress | nucleus | 61.56 | 61.3 |
| AT5G17320.1 | Thale cress | nucleus | 61.56 | 60.45 |
| Os06t0208100-00 | Rice | nucleus | 10.64 | 58.14 |
| CDY42301 | Canola | nucleus | 48.94 | 50.0 |
| CDY67945 | Canola | nucleus | 48.23 | 49.35 |
| CDY43137 | Canola | nucleus | 48.09 | 49.2 |
| CDY44946 | Canola | nucleus | 44.68 | 48.61 |
| CDY49937 | Canola | nucleus | 47.09 | 47.84 |
| CDY21211 | Canola | nucleus | 46.81 | 47.55 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 45.25 | 44.68 |
| Solyc09g066070.2.1 | Tomato | cytosol | 25.53 | 41.76 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 39.57 | 40.73 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 39.57 | 40.73 |
| KRH11810 | Soybean | nucleus | 40.99 | 40.53 |
| PGSC0003DMT400038820 | Potato | extracellular | 20.85 | 40.38 |
| PGSC0003DMT400051268 | Potato | cytosol | 28.51 | 40.28 |
| Solyc09g057530.1.1 | Tomato | cytosol | 7.8 | 40.15 |
| Solyc10g018030.1.1 | Tomato | cytosol | 23.4 | 39.95 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 39.43 | 39.89 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 34.04 | 39.8 |
| Zm00001d018225_P001 | Maize | nucleus | 39.01 | 39.74 |
| KRH36827 | Soybean | nucleus | 39.86 | 39.63 |
| PGSC0003DMT400085057 | Potato | cytosol | 26.81 | 39.54 |
| CDX96744 | Canola | nucleus | 37.73 | 39.52 |
| Zm00001d052133_P001 | Maize | nucleus | 39.01 | 39.4 |
| Zm00001d044973_P001 | Maize | nucleus | 38.44 | 39.33 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 37.87 | 39.21 |
| Solyc09g060130.1.1 | Tomato | cytosol | 24.68 | 39.19 |
| Zm00001d037140_P004 | Maize | nucleus | 38.16 | 39.16 |
| CDX83884 | Canola | nucleus | 38.01 | 39.12 |
| Solyc09g057540.2.1 | Tomato | cytosol | 27.52 | 39.03 |
| Solyc07g026560.1.1 | Tomato | cytosol | 26.1 | 38.9 |
| EES05874 | Sorghum | nucleus | 39.01 | 38.9 |
| GSMUA_Achr10P... | Banana | nucleus | 37.45 | 38.71 |
| CDY42097 | Canola | nucleus | 28.37 | 38.68 |
| GSMUA_Achr10P... | Banana | nucleus | 39.01 | 38.68 |
| EER89393 | Sorghum | nucleus | 38.3 | 38.57 |
| Solyc09g066050.2.1 | Tomato | cytosol | 29.93 | 38.16 |
| Solyc11g011940.1.1 | Tomato | nucleus | 38.72 | 38.08 |
| Solyc07g037910.1.1 | Tomato | cytosol | 11.35 | 37.91 |
| CDX68229 | Canola | nucleus | 37.73 | 37.84 |
| Solyc11g022420.1.1 | Tomato | cytosol | 25.67 | 37.79 |
| CDY11109 | Canola | nucleus | 38.01 | 37.75 |
| CDY26204 | Canola | nucleus | 34.04 | 37.68 |
| CDY19185 | Canola | nucleus | 36.31 | 37.54 |
| Solyc09g060170.1.1 | Tomato | cytosol | 18.3 | 37.5 |
| KRH36826 | Soybean | nucleus | 37.87 | 37.45 |
| CDY26205 | Canola | nucleus | 36.6 | 37.39 |
| PGSC0003DMT400051266 | Potato | cytosol | 20.57 | 37.28 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 39.01 | 37.21 |
| CDX72984 | Canola | nucleus | 37.73 | 37.2 |
| CDX96471 | Canola | nucleus | 37.87 | 37.19 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 19.29 | 36.96 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 38.44 | 36.82 |
| Solyc04g025490.1.1 | Tomato | cytosol | 12.62 | 36.78 |
| Os06t0207966-00 | Rice | plastid | 13.62 | 36.5 |
| Solyc05g015030.1.1 | Tomato | cytosol | 24.54 | 36.5 |
| Solyc09g066030.1.1 | Tomato | nucleus | 37.02 | 36.1 |
| CDX76399 | Canola | nucleus | 36.45 | 35.94 |
| CDY21319 | Canola | nucleus | 36.31 | 35.75 |
| Solyc08g062510.2.1 | Tomato | nucleus | 33.05 | 35.68 |
| CDY27417 | Canola | nucleus | 36.03 | 35.57 |
| CDX90879 | Canola | nucleus | 36.03 | 35.47 |
| Solyc10g018020.1.1 | Tomato | extracellular | 16.88 | 35.42 |
| CDY06167 | Canola | nucleus | 35.46 | 34.72 |
| CDX98703 | Canola | nucleus | 34.18 | 34.68 |
| PGSC0003DMT400036411 | Potato | nucleus | 25.82 | 34.67 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 34.33 | 34.62 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 35.32 | 34.34 |
| CDY66622 | Canola | nucleus | 35.6 | 34.34 |
| CDX94586 | Canola | nucleus | 35.6 | 34.29 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 35.46 | 34.25 |
| CDX94054 | Canola | nucleus | 33.76 | 34.24 |
| CDY16639 | Canola | nucleus | 35.6 | 34.24 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 35.04 | 33.74 |
| CDX79091 | Canola | nucleus | 35.32 | 33.38 |
| CDY00515 | Canola | nucleus | 31.77 | 33.28 |
| CDY31916 | Canola | nucleus | 31.77 | 33.28 |
| Solyc08g062520.2.1 | Tomato | cytosol | 23.97 | 33.07 |
| CDY10041 | Canola | nucleus | 34.75 | 32.8 |
| Solyc04g025480.1.1 | Tomato | cytosol | 29.93 | 32.21 |
| CDX89415 | Canola | cytosol, mitochondrion | 8.09 | 32.02 |
| Solyc07g026570.1.1 | Tomato | nucleus | 6.38 | 31.91 |
| CDY23096 | Canola | nucleus | 5.96 | 31.82 |
| KRH42428 | Soybean | nucleus | 33.9 | 31.57 |
| CDX74762 | Canola | nucleus | 31.35 | 31.21 |
| CDY18903 | Canola | nucleus | 30.92 | 30.92 |
| CDX74347 | Canola | nucleus | 34.75 | 30.9 |
| CDY49515 | Canola | plasma membrane | 35.46 | 30.83 |
| CDY48272 | Canola | nucleus | 30.78 | 30.82 |
| CDX67855 | Canola | nucleus | 34.04 | 30.77 |
| CDY51143 | Canola | nucleus | 34.33 | 30.63 |
| CDY12213 | Canola | nucleus | 30.92 | 30.62 |
| CDX91894 | Canola | nucleus | 34.47 | 30.6 |
| CDY45684 | Canola | nucleus | 33.9 | 30.48 |
| CDY07201 | Canola | nucleus | 33.9 | 30.33 |
| CDY46842 | Canola | nucleus | 35.32 | 30.0 |
| CDY71572 | Canola | nucleus | 16.45 | 29.52 |
| CDY19129 | Canola | nucleus | 29.93 | 29.02 |
| CDY30748 | Canola | endoplasmic reticulum | 24.11 | 28.96 |
| CDX79408 | Canola | nucleus | 31.63 | 28.59 |
| CDY15339 | Canola | nucleus | 29.5 | 28.45 |
| KRH42429 | Soybean | cytosol | 29.36 | 28.36 |
| CDX67929 | Canola | nucleus | 31.21 | 28.1 |
| CDX76559 | Canola | nucleus | 29.22 | 28.07 |
| CDY08866 | Canola | nucleus | 28.94 | 27.72 |
| CDX77711 | Canola | nucleus | 31.91 | 27.34 |
| CDY33492 | Canola | nucleus | 30.78 | 27.26 |
| CDY43458 | Canola | nucleus | 31.35 | 27.22 |
| CDY03177 | Canola | nucleus | 31.06 | 26.51 |
| CDX89416 | Canola | nucleus | 21.28 | 23.11 |
| TraesCSU01G150000.1 | Wheat | nucleus | 7.09 | 22.94 |
| CDX94443 | Canola | cytosol | 20.28 | 22.77 |
| CDY39874 | Canola | plasma membrane | 5.67 | 20.83 |
| TraesCSU01G244000.1 | Wheat | nucleus | 5.82 | 19.9 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 2.7 | 15.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078D850 | EnsemblPlants:CDX85461 | ProteinID:CDX85461 |
| ProteinID:CDX85461.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00143159001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| InterPro:IPR023393 | PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF504 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf |
| InterPro:START_lipid-bd_dom | UniParc:UPI0004EDCAA2 | SEG:seg | : | : | : |
Description
BnaA02g03520D
Coordinates
chrLK031842:+:214960..219210
Molecular Weight (calculated)
79533.6 Da
IEP (calculated)
6.607
GRAVY (calculated)
-0.395
Length
705 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSNHDSSSS NGLETSMSTT NRDNKIYHRH SVHQIQRLEA YFKECPHPDD TQRHKLGEEL KLKPKQIKFW FQNKRTQAKA QSEKVFNASL RAENIRIRRE
101: NEVIQEALKT VTCPPCGGPR PGKEERKLYL QKMRAHNAYL KRQLEQISDF VNNNGGHSIP SVNSLASTSS NPHFSYGTSS NRPLEPPSLE REQYTHEHIN
201: NAQPTQHFQP LSQMEKMMMS QTMVNAVTEI IRLIHIEEPM WIKSSIDDRL VIDQENYEKS FTNISHLKSP SARIESSKDV VVVPMDARNL VDMFFDTEKW
301: ARIFSTIVNE AKTIHVLESM DTQRQNFSQL MYEQLHILSP LVPPREFIIL RCCQQIEDDL WVIADVSCHH VNIDFESPTC SKRPSGCLIQ ALPNGLSKVT
401: WMEHVEVNEK VRTHRIYRDL LCGGFGYGAR RWTVTLERMC ERLHLSSISV FPTTDFAGVV ETIEGRRSVM NLGERMLKNF AWILKMSGNY DFSQLSETNS
501: SGVRVSVRVN SEAGQPTGLI VCAASSICLP LSPLEVYNFL TNLEIRHQWD VLCHGYPAAE VAGFATGTDD KNRVNILQTA STAEDADMMI IQDSFRDALG
601: GMVVYAPVDL NTASAAVSGQ VNPSGIPILP SGFIISRDGH HFTSPELEDG SDYSKSLLTV AFQILVSGPT LSGDLQIEES TTTVNTLITS TLQRIKVMLN
701: CNEGK
101: NEVIQEALKT VTCPPCGGPR PGKEERKLYL QKMRAHNAYL KRQLEQISDF VNNNGGHSIP SVNSLASTSS NPHFSYGTSS NRPLEPPSLE REQYTHEHIN
201: NAQPTQHFQP LSQMEKMMMS QTMVNAVTEI IRLIHIEEPM WIKSSIDDRL VIDQENYEKS FTNISHLKSP SARIESSKDV VVVPMDARNL VDMFFDTEKW
301: ARIFSTIVNE AKTIHVLESM DTQRQNFSQL MYEQLHILSP LVPPREFIIL RCCQQIEDDL WVIADVSCHH VNIDFESPTC SKRPSGCLIQ ALPNGLSKVT
401: WMEHVEVNEK VRTHRIYRDL LCGGFGYGAR RWTVTLERMC ERLHLSSISV FPTTDFAGVV ETIEGRRSVM NLGERMLKNF AWILKMSGNY DFSQLSETNS
501: SGVRVSVRVN SEAGQPTGLI VCAASSICLP LSPLEVYNFL TNLEIRHQWD VLCHGYPAAE VAGFATGTDD KNRVNILQTA STAEDADMMI IQDSFRDALG
601: GMVVYAPVDL NTASAAVSGQ VNPSGIPILP SGFIISRDGH HFTSPELEDG SDYSKSLLTV AFQILVSGPT LSGDLQIEES TTTVNTLITS TLQRIKVMLN
701: CNEGK
001: MDFTRDDNSS DERENDVDAN TNNRHEKKGY HRHTNEQIHR LETYFKECPH PDEFQRRLLG EELNLKPKQI KFWFQNKRTQ AKSHNEKADN AALRAENIKI
101: RRENESMEDA LNNVVCPPCG GRGPGREDQL RHLQKLRAQN AYLKDEYERV SNYLKQYGGH SMHNVEATPY LHGPSNHAST SKNRPALYGT SSNRLPEPSS
201: IFRGPYTRGN MNTTAPPQPR KPLEMQNFQP LSQLEKIAML EAAEKAVSEV LSLIQMDDTM WKKSSIDDRL VIDPGLYEKY FTKTNTNGRP ESSKDVVVVQ
301: MDAGNLIDIF LTAEKWARLF PTIVNEAKTI HVLDSVDHRG KTFSRVIYEQ LHILSPLVPP REFMILRTCQ QIEDNVWMIA DVSCHLPNIE FDLSFPICTK
401: RPSGVLIQAL PHGFSKVTWI EHVVVNDNRV RPHKLYRDLL YGGFGYGARR WTVTLERTCE RLIFSTSVPA LPNNDNPGVV QTIRGRNSVM HLGERMLRNF
501: AWMMKMVNKL DFSPQSETNN SGIRIGVRIN NEAGQPPGLI VCAGSSLSLP LPPVQVYDFL KNLEVRHQWD VLCHGNPATE AARFVTGSNP RNTVSFLEPS
601: IRDINTKLMI LQDSFKDALG GMVAYAPMDL NTACAAISGD IDPTTIPILP SGFMISRDGR PSEGEAEGGS YTLLTVAFQI LVSGPSYSPD TNLEVSATTV
701: NTLISSTVQR IKAMLKCE
101: RRENESMEDA LNNVVCPPCG GRGPGREDQL RHLQKLRAQN AYLKDEYERV SNYLKQYGGH SMHNVEATPY LHGPSNHAST SKNRPALYGT SSNRLPEPSS
201: IFRGPYTRGN MNTTAPPQPR KPLEMQNFQP LSQLEKIAML EAAEKAVSEV LSLIQMDDTM WKKSSIDDRL VIDPGLYEKY FTKTNTNGRP ESSKDVVVVQ
301: MDAGNLIDIF LTAEKWARLF PTIVNEAKTI HVLDSVDHRG KTFSRVIYEQ LHILSPLVPP REFMILRTCQ QIEDNVWMIA DVSCHLPNIE FDLSFPICTK
401: RPSGVLIQAL PHGFSKVTWI EHVVVNDNRV RPHKLYRDLL YGGFGYGARR WTVTLERTCE RLIFSTSVPA LPNNDNPGVV QTIRGRNSVM HLGERMLRNF
501: AWMMKMVNKL DFSPQSETNN SGIRIGVRIN NEAGQPPGLI VCAGSSLSLP LPPVQVYDFL KNLEVRHQWD VLCHGNPATE AARFVTGSNP RNTVSFLEPS
601: IRDINTKLMI LQDSFKDALG GMVAYAPMDL NTACAAISGD IDPTTIPILP SGFMISRDGR PSEGEAEGGS YTLLTVAFQI LVSGPSYSPD TNLEVSATTV
701: NTLISSTVQR IKAMLKCE
Arabidopsis Description
HDG9Homeobox-leucine zipper protein HDG9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFI0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.