Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27417 | Canola | nucleus | 94.69 | 94.82 |
| Bra020872.1-P | Field mustard | nucleus | 97.76 | 93.45 |
| CDX98703 | Canola | nucleus | 87.55 | 90.07 |
| CDX94054 | Canola | nucleus | 87.13 | 89.64 |
| CDY23096 | Canola | nucleus | 16.5 | 89.39 |
| CDX79091 | Canola | nucleus | 89.93 | 86.19 |
| CDX90879 | Canola | nucleus | 86.29 | 86.17 |
| AT4G21750.3 | Thale cress | nucleus | 91.75 | 86.09 |
| CDY66622 | Canola | nucleus | 87.97 | 86.05 |
| CDY21319 | Canola | nucleus | 85.87 | 85.75 |
| CDY16639 | Canola | nucleus | 85.73 | 83.63 |
| CDX94586 | Canola | nucleus | 85.59 | 83.61 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 69.23 | 75.0 |
| KRH27601 | Soybean | nucleus | 76.08 | 74.32 |
| KRH77881 | Soybean | nucleus | 75.66 | 74.01 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 59.86 | 73.04 |
| CDY06167 | Canola | nucleus | 70.07 | 69.58 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 70.35 | 69.28 |
| CDY10041 | Canola | nucleus | 69.65 | 66.67 |
| EES11464 | Sorghum | nucleus | 72.45 | 65.65 |
| EES13460 | Sorghum | mitochondrion, nucleus | 70.91 | 64.92 |
| GSMUA_Achr10P... | Banana | nucleus | 64.48 | 64.48 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 69.93 | 64.43 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 69.65 | 64.26 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 69.65 | 64.09 |
| Zm00001d049443_P005 | Maize | nucleus | 71.33 | 64.07 |
| Zm00001d002234_P003 | Maize | nucleus | 70.49 | 63.48 |
| GSMUA_Achr11P... | Banana | plastid | 69.65 | 63.12 |
| Os08t0136100-01 | Rice | nucleus | 68.67 | 62.55 |
| CDY71572 | Canola | nucleus | 34.27 | 62.34 |
| CDY49515 | Canola | plasma membrane | 69.65 | 61.41 |
| Zm00001d026351_P003 | Maize | nucleus | 72.45 | 61.37 |
| Zm00001d000247_P001 | Maize | plasma membrane | 61.12 | 60.78 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 66.99 | 60.03 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 66.71 | 59.92 |
| CDY46842 | Canola | nucleus | 69.51 | 59.88 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 66.43 | 59.67 |
| Zm00001d024701_P001 | Maize | nucleus | 66.01 | 59.22 |
| EES14500 | Sorghum | nucleus | 66.99 | 58.85 |
| CDY12213 | Canola | nucleus | 48.95 | 49.16 |
| CDY18903 | Canola | nucleus | 48.25 | 48.94 |
| CDY48272 | Canola | nucleus | 48.11 | 48.86 |
| CDX74762 | Canola | nucleus | 47.97 | 48.45 |
| CDY51143 | Canola | nucleus | 53.43 | 48.35 |
| CDY07201 | Canola | nucleus | 53.01 | 48.1 |
| CDX74347 | Canola | nucleus | 53.29 | 48.05 |
| CDX91894 | Canola | nucleus | 53.15 | 47.86 |
| CDY30748 | Canola | endoplasmic reticulum | 39.02 | 47.53 |
| CDX96744 | Canola | nucleus | 44.48 | 47.25 |
| CDX67855 | Canola | nucleus | 51.47 | 47.18 |
| CDY45684 | Canola | nucleus | 51.61 | 47.07 |
| CDY19129 | Canola | nucleus | 47.69 | 46.91 |
| CDY15339 | Canola | nucleus | 47.41 | 46.37 |
| CDY31916 | Canola | nucleus | 43.64 | 46.36 |
| CDY26204 | Canola | nucleus | 41.26 | 46.31 |
| CDX83884 | Canola | nucleus | 44.2 | 46.13 |
| CDY00515 | Canola | nucleus | 43.36 | 46.06 |
| CDX68229 | Canola | nucleus | 45.03 | 45.8 |
| CDY11109 | Canola | nucleus | 45.45 | 45.77 |
| CDY19185 | Canola | nucleus | 43.36 | 45.45 |
| CDY42097 | Canola | nucleus | 32.59 | 45.07 |
| CDY26205 | Canola | nucleus | 43.36 | 44.93 |
| CDX96471 | Canola | nucleus | 45.03 | 44.85 |
| CDX72984 | Canola | nucleus | 44.62 | 44.62 |
| CDX89415 | Canola | cytosol, mitochondrion | 10.63 | 42.7 |
| Os08t0187500-01 | Rice | nucleus | 19.16 | 42.02 |
| CDY43458 | Canola | nucleus | 43.92 | 38.67 |
| CDY03177 | Canola | nucleus | 43.92 | 38.01 |
| CDX79408 | Canola | nucleus | 41.26 | 37.82 |
| CDX67929 | Canola | nucleus | 41.4 | 37.8 |
| CDX76559 | Canola | nucleus | 38.46 | 37.47 |
| CDX77711 | Canola | nucleus | 42.94 | 37.3 |
| CDY08866 | Canola | nucleus | 38.04 | 36.96 |
| CDY33492 | Canola | nucleus | 41.12 | 36.93 |
| CDX85461 | Canola | cytosol | 35.94 | 36.45 |
| CDY39874 | Canola | plasma membrane | 9.65 | 35.94 |
| CDY69499 | Canola | cytosol | 15.24 | 35.86 |
| CDY42301 | Canola | nucleus | 34.55 | 35.8 |
| CDY62389 | Canola | cytosol | 24.34 | 35.58 |
| CDY67945 | Canola | nucleus | 34.13 | 35.41 |
| CDY43137 | Canola | nucleus | 33.57 | 34.83 |
| CDY53691 | Canola | nucleus | 34.55 | 34.79 |
| CDY02713 | Canola | nucleus | 35.94 | 34.78 |
| CDY44946 | Canola | nucleus | 31.47 | 34.72 |
| CDY49937 | Canola | nucleus | 33.29 | 34.29 |
| CDY21211 | Canola | nucleus | 33.29 | 34.29 |
| CDY16938 | Canola | nucleus | 31.05 | 33.64 |
| CDX89416 | Canola | nucleus | 28.25 | 31.12 |
| CDX94443 | Canola | cytosol | 26.43 | 30.1 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078CK09 | EnsemblPlants:CDX76399 | ProteinID:CDX76399 | ProteinID:CDX76399.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00126794001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF320 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START_lipid-bd_dom | UniParc:UPI0004EF3257 | SEG:seg | : | : | : |
Description
BnaA08g10010D
Coordinates
chrLK031807:-:942058..948142
Molecular Weight (calculated)
78882.6 Da
IEP (calculated)
5.934
GRAVY (calculated)
-0.355
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPPNMFESY HHMFDMTKSS DNDLGLTGSR EDAFETKSGA EVTLENPLEE ELQDPDQRPN KKKRYHRHTQ RQIQELESFF KECPHPDDKQ RKELSRELNL
101: EPLQIKFWFQ NKRTQMKAQH ERHENSILKS DNDKLRAENN RYKDALSNAT CPNCGGPAAI GEMSFDEQHL RIENARLREE IDRISSIAAK YVGKPMLPLS
201: SPFSQLTTST HIPTRSLDLE VGSFGNNNSS QTGFKPMIVE LAVAAMEELV RMAQTGDPLW VSSDSSGEIL NEDEYFRTFP RGIGPKPIGL RSEASRESTV
301: VIMNQINLVE ILMDVNQWSS VFCGIVSRAL TLDVLSTGVA GNYNGALQVL TAEFQVPSPL VPTRENYFVR YCKQHSDTTW AVVDVSLDSL RPSPITRSRR
401: RPSGCLIQEL QNGYSKVTWV EHTEVDDISV HTMYKPLVNT GLAFGAKRWV ATLDRQCERL ASSMASNIPT GDLSVITSPE GRKSMLKLAE RMVMSFCSGV
501: GASTAHAWTT LAATGSDDVR VMTRKSMDDP GRPPGIVLSA ATSFWIPMGP KRVFDFLRDE NSRSQWDILS NGGLVKEMAH IANGRDPGNS VSLLRVNSSN
601: SGESNMLILQ ESCTDASGSY VIYAPVDMMA MNVVLSGGDP DYVALLPSGF AILPDGSARG GNATSNCGSL LTVAFQILVD SVPTAKLSLG SVATVNSLIK
701: CTVQRIKDAL ACDGA
101: EPLQIKFWFQ NKRTQMKAQH ERHENSILKS DNDKLRAENN RYKDALSNAT CPNCGGPAAI GEMSFDEQHL RIENARLREE IDRISSIAAK YVGKPMLPLS
201: SPFSQLTTST HIPTRSLDLE VGSFGNNNSS QTGFKPMIVE LAVAAMEELV RMAQTGDPLW VSSDSSGEIL NEDEYFRTFP RGIGPKPIGL RSEASRESTV
301: VIMNQINLVE ILMDVNQWSS VFCGIVSRAL TLDVLSTGVA GNYNGALQVL TAEFQVPSPL VPTRENYFVR YCKQHSDTTW AVVDVSLDSL RPSPITRSRR
401: RPSGCLIQEL QNGYSKVTWV EHTEVDDISV HTMYKPLVNT GLAFGAKRWV ATLDRQCERL ASSMASNIPT GDLSVITSPE GRKSMLKLAE RMVMSFCSGV
501: GASTAHAWTT LAATGSDDVR VMTRKSMDDP GRPPGIVLSA ATSFWIPMGP KRVFDFLRDE NSRSQWDILS NGGLVKEMAH IANGRDPGNS VSLLRVNSSN
601: SGESNMLILQ ESCTDASGSY VIYAPVDMMA MNVVLSGGDP DYVALLPSGF AILPDGSARG GNATSNCGSL LTVAFQILVD SVPTAKLSLG SVATVNSLIK
701: CTVQRIKDAL ACDGA
001: MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
Arabidopsis Description
ATML1ATML1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ61]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.