Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79091 | Canola | nucleus | 95.08 | 93.16 |
| CDY23096 | Canola | nucleus | 16.42 | 90.91 |
| CDX98703 | Canola | nucleus | 85.09 | 89.5 |
| CDY27417 | Canola | nucleus | 87.14 | 89.22 |
| CDX94054 | Canola | nucleus | 84.4 | 88.78 |
| CDX76399 | Canola | nucleus | 86.05 | 87.97 |
| AT4G21750.3 | Thale cress | nucleus | 88.78 | 85.17 |
| CDX90879 | Canola | nucleus | 83.04 | 84.78 |
| CDY21319 | Canola | nucleus | 82.76 | 84.5 |
| CDY16639 | Canola | nucleus | 83.31 | 83.08 |
| CDX94586 | Canola | nucleus | 82.9 | 82.79 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 67.44 | 74.7 |
| KRH27601 | Soybean | nucleus | 74.14 | 74.04 |
| KRH77881 | Soybean | nucleus | 73.87 | 73.87 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 58.0 | 72.35 |
| CDY06167 | Canola | nucleus | 68.67 | 69.72 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 68.13 | 68.59 |
| CDY10041 | Canola | nucleus | 68.4 | 66.93 |
| EES11464 | Sorghum | nucleus | 70.86 | 65.65 |
| EES13460 | Sorghum | mitochondrion, nucleus | 69.49 | 65.04 |
| GSMUA_Achr10P... | Banana | nucleus | 63.61 | 65.03 |
| Zm00001d049443_P005 | Maize | nucleus | 69.9 | 64.2 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 67.72 | 63.79 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 67.58 | 63.74 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 67.44 | 63.45 |
| CDY71572 | Canola | nucleus | 34.06 | 63.36 |
| Zm00001d002234_P003 | Maize | nucleus | 68.54 | 63.1 |
| GSMUA_Achr11P... | Banana | plastid | 67.99 | 62.99 |
| Os08t0136100-01 | Rice | nucleus | 66.62 | 62.04 |
| CDY49515 | Canola | plasma membrane | 68.4 | 61.65 |
| Zm00001d026351_P003 | Maize | nucleus | 70.72 | 61.26 |
| Zm00001d000247_P001 | Maize | plasma membrane | 59.37 | 60.36 |
| CDY46842 | Canola | nucleus | 68.4 | 60.24 |
| Zm00001d024701_P001 | Maize | nucleus | 64.98 | 59.6 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 64.57 | 59.3 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 64.43 | 59.17 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 64.57 | 59.15 |
| EES14500 | Sorghum | nucleus | 65.25 | 58.6 |
| CDY12213 | Canola | nucleus | 48.56 | 49.86 |
| CDY48272 | Canola | nucleus | 47.33 | 49.15 |
| CDX96744 | Canola | nucleus | 44.46 | 48.29 |
| CDY30748 | Canola | endoplasmic reticulum | 38.58 | 48.04 |
| CDY18903 | Canola | nucleus | 46.24 | 47.94 |
| CDX74762 | Canola | nucleus | 46.1 | 47.6 |
| CDY51143 | Canola | nucleus | 51.16 | 47.34 |
| CDY19129 | Canola | nucleus | 47.06 | 47.32 |
| CDY26204 | Canola | nucleus | 41.04 | 47.1 |
| CDX83884 | Canola | nucleus | 44.05 | 47.01 |
| CDY07201 | Canola | nucleus | 50.62 | 46.95 |
| CDX74347 | Canola | nucleus | 50.89 | 46.91 |
| CDX91894 | Canola | nucleus | 50.62 | 46.6 |
| CDY15339 | Canola | nucleus | 46.51 | 46.51 |
| CDY45684 | Canola | nucleus | 49.79 | 46.43 |
| CDX67855 | Canola | nucleus | 49.52 | 46.41 |
| CDY19185 | Canola | nucleus | 42.95 | 46.04 |
| CDY42097 | Canola | nucleus | 32.42 | 45.84 |
| CDX68229 | Canola | nucleus | 44.05 | 45.8 |
| CDY11109 | Canola | nucleus | 44.32 | 45.63 |
| CDY31916 | Canola | nucleus | 42.0 | 45.62 |
| CDY26205 | Canola | nucleus | 42.95 | 45.51 |
| CDY00515 | Canola | nucleus | 41.72 | 45.32 |
| CDX96471 | Canola | nucleus | 44.32 | 45.13 |
| CDX72984 | Canola | nucleus | 43.78 | 44.76 |
| Os08t0187500-01 | Rice | nucleus | 18.74 | 42.02 |
| CDX89415 | Canola | cytosol, mitochondrion | 10.12 | 41.57 |
| CDY43458 | Canola | nucleus | 42.13 | 37.93 |
| CDX76559 | Canola | nucleus | 38.03 | 37.87 |
| CDY03177 | Canola | nucleus | 42.41 | 37.53 |
| CDY39874 | Canola | plasma membrane | 9.85 | 37.5 |
| CDY08866 | Canola | nucleus | 37.76 | 37.5 |
| CDX77711 | Canola | nucleus | 41.72 | 37.06 |
| CDY33492 | Canola | nucleus | 40.08 | 36.81 |
| CDX79408 | Canola | nucleus | 39.12 | 36.67 |
| CDX67929 | Canola | nucleus | 39.26 | 36.65 |
| CDX85461 | Canola | cytosol | 34.34 | 35.6 |
| CDY69499 | Canola | cytosol | 14.77 | 35.53 |
| CDY42301 | Canola | nucleus | 33.11 | 35.07 |
| CDY62389 | Canola | cytosol | 23.26 | 34.76 |
| CDY67945 | Canola | nucleus | 32.56 | 34.54 |
| CDY53691 | Canola | nucleus | 33.52 | 34.51 |
| CDY44946 | Canola | nucleus | 30.23 | 34.1 |
| CDY02713 | Canola | nucleus | 34.34 | 33.96 |
| CDY43137 | Canola | nucleus | 32.01 | 33.96 |
| CDY16938 | Canola | nucleus | 30.51 | 33.79 |
| CDY49937 | Canola | nucleus | 31.33 | 33.0 |
| CDY21211 | Canola | nucleus | 31.19 | 32.85 |
| CDX89416 | Canola | nucleus | 27.22 | 30.66 |
| CDX94443 | Canola | cytosol | 24.9 | 28.98 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078JMM7 | UniProt:A0A078JMM7 | EnsemblPlants:CDY66622 | ProteinID:CDY66622 |
| ProteinID:CDY66622.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00054659001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF320 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom |
| UniParc:UPI0004EDD2CC | SEG:seg | : | : | : | : |
Description
BnaCnng51630DBnaCnng51630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMM7]
Coordinates
chrLK035362:+:3297..6445
Molecular Weight (calculated)
81020.3 Da
IEP (calculated)
5.526
GRAVY (calculated)
-0.343
Length
731 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQPNMFEAH QHMFDMTPKE SDTDLGLTGS REDDFETKSG AEVTMENLLE EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELN
101: LEPLQIKFWF QNKRTQMKAH HERHDNSILK ADNDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISSMAA KYVGKPLSSH
201: STQLTSSHYI PSRSLDLEAV NFGTNHQTSF VGEMHGTSDI MRSVSIPCEA DKPIIVELAV AAMEELVTMA QTSDLLWVLN DNLGEILNEE EYFRMFPRCI
301: GPKPIGFRSE ASRESTVVIM NHINLVEILM DVNQWFSVFC GIVSRALTLE VLSTGIAGNY NGALQVMTAE FQVPSPLVPT RENYFLRYCK QHGDNTWAVV
401: DVSLDNLRPS PITRSRRRPS GCLIQELQNG YSKVTWVEHM EVDDRSVHTM YKPLVNTGLA FGAKRWVATL DRQCERLASS MASNIPTGDL SVITSPEGRK
501: SMLKLAERMA RSFCSGVGAS TAHAWTTLAT TGSDDVRVMT RKSMDDPGRP PGIVLSAATS FWIPVAPKRV FDFLKDENSR SEWDILSNGG LVQEMAHIAN
601: GRDPGNCVSL LRVNGTNSGQ GNMLILQESC TDVSGSYVIY APVDVAAMDV VLSGGDPDYV ALLPSGFAIL PDGGEGGDAM VNSGSLLTVA FQIIVDSVPT
701: AKLSLGSVTT VNSLIKCTAE RIKGALACDG A
101: LEPLQIKFWF QNKRTQMKAH HERHDNSILK ADNDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISSMAA KYVGKPLSSH
201: STQLTSSHYI PSRSLDLEAV NFGTNHQTSF VGEMHGTSDI MRSVSIPCEA DKPIIVELAV AAMEELVTMA QTSDLLWVLN DNLGEILNEE EYFRMFPRCI
301: GPKPIGFRSE ASRESTVVIM NHINLVEILM DVNQWFSVFC GIVSRALTLE VLSTGIAGNY NGALQVMTAE FQVPSPLVPT RENYFLRYCK QHGDNTWAVV
401: DVSLDNLRPS PITRSRRRPS GCLIQELQNG YSKVTWVEHM EVDDRSVHTM YKPLVNTGLA FGAKRWVATL DRQCERLASS MASNIPTGDL SVITSPEGRK
501: SMLKLAERMA RSFCSGVGAS TAHAWTTLAT TGSDDVRVMT RKSMDDPGRP PGIVLSAATS FWIPVAPKRV FDFLKDENSR SEWDILSNGG LVQEMAHIAN
601: GRDPGNCVSL LRVNGTNSGQ GNMLILQESC TDVSGSYVIY APVDVAAMDV VLSGGDPDYV ALLPSGFAIL PDGGEGGDAM VNSGSLLTVA FQIIVDSVPT
701: AKLSLGSVTT VNSLIKCTAE RIKGALACDG A
001: MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
Arabidopsis Description
ATML1ATML1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ61]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.