Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21211 | Canola | nucleus | 96.97 | 96.97 |
| CDY42301 | Canola | nucleus | 65.85 | 66.23 |
| CDY44946 | Canola | nucleus | 61.38 | 65.74 |
| CDY43137 | Canola | nucleus | 65.13 | 65.6 |
| CDY67945 | Canola | nucleus | 65.13 | 65.6 |
| AT3G03260.1 | Thale cress | nucleus | 60.81 | 60.37 |
| Os06t0208100-00 | Rice | nucleus | 10.81 | 58.14 |
| CDY62389 | Canola | cytosol | 33.57 | 47.65 |
| CDX85461 | Canola | cytosol | 47.84 | 47.09 |
| CDY53691 | Canola | nucleus | 46.69 | 45.63 |
| CDY69499 | Canola | cytosol | 19.74 | 45.07 |
| CDY02713 | Canola | nucleus | 47.84 | 44.93 |
| CDY16938 | Canola | nucleus | 41.79 | 43.94 |
| Solyc09g057530.1.1 | Tomato | cytosol | 7.93 | 40.15 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 40.2 | 39.08 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 37.18 | 37.66 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 37.18 | 37.66 |
| Zm00001d018225_P001 | Maize | nucleus | 37.46 | 37.57 |
| Zm00001d052133_P001 | Maize | nucleus | 37.61 | 37.39 |
| GSMUA_Achr10P... | Banana | nucleus | 37.75 | 36.85 |
| EES05874 | Sorghum | nucleus | 37.46 | 36.78 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 36.89 | 36.73 |
| Zm00001d044973_P001 | Maize | nucleus | 36.46 | 36.72 |
| PGSC0003DMT400038820 | Potato | extracellular | 19.16 | 36.54 |
| Zm00001d037140_P004 | Maize | nucleus | 35.88 | 36.24 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 31.41 | 36.15 |
| Os06t0207966-00 | Rice | plastid | 13.69 | 36.12 |
| EER89393 | Sorghum | nucleus | 36.02 | 35.71 |
| CDX96744 | Canola | nucleus | 34.58 | 35.66 |
| PGSC0003DMT400085057 | Potato | cytosol | 24.5 | 35.56 |
| Solyc11g011940.1.1 | Tomato | nucleus | 36.6 | 35.43 |
| GSMUA_Achr10P... | Banana | nucleus | 34.73 | 35.34 |
| Solyc09g066070.2.1 | Tomato | cytosol | 21.9 | 35.27 |
| KRH11810 | Soybean | nucleus | 36.17 | 35.2 |
| KRH36827 | Soybean | nucleus | 35.59 | 34.84 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 37.03 | 34.78 |
| CDX83884 | Canola | nucleus | 34.29 | 34.74 |
| PGSC0003DMT400051268 | Potato | cytosol | 24.93 | 34.67 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 36.6 | 34.51 |
| CDY11109 | Canola | nucleus | 35.3 | 34.51 |
| Solyc09g057540.2.1 | Tomato | cytosol | 24.64 | 34.41 |
| CDX72984 | Canola | nucleus | 35.3 | 34.27 |
| CDX96471 | Canola | nucleus | 35.45 | 34.26 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 33.57 | 34.21 |
| Solyc10g018030.1.1 | Tomato | cytosol | 20.32 | 34.14 |
| CDX68229 | Canola | nucleus | 34.58 | 34.14 |
| CDY42097 | Canola | nucleus | 25.36 | 34.04 |
| Solyc09g060130.1.1 | Tomato | cytosol | 21.76 | 34.01 |
| Solyc09g066030.1.1 | Tomato | nucleus | 35.01 | 33.61 |
| CDY23096 | Canola | nucleus | 6.34 | 33.33 |
| CDY27417 | Canola | nucleus | 34.29 | 33.33 |
| Solyc07g026570.1.1 | Tomato | nucleus | 6.77 | 33.33 |
| CDX76399 | Canola | nucleus | 34.29 | 33.29 |
| KRH36826 | Soybean | nucleus | 34.15 | 33.24 |
| Solyc10g018020.1.1 | Tomato | extracellular | 15.99 | 33.04 |
| CDY19185 | Canola | nucleus | 32.42 | 32.99 |
| CDY26204 | Canola | nucleus | 30.26 | 32.97 |
| CDX90879 | Canola | nucleus | 34.01 | 32.96 |
| CDY21319 | Canola | nucleus | 34.01 | 32.96 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 17.44 | 32.88 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 34.29 | 32.83 |
| CDY26205 | Canola | nucleus | 32.56 | 32.75 |
| Solyc07g037910.1.1 | Tomato | cytosol | 9.94 | 32.7 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 34.44 | 32.65 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 34.29 | 32.6 |
| Solyc09g066050.2.1 | Tomato | cytosol | 25.94 | 32.55 |
| CDX94054 | Canola | nucleus | 32.28 | 32.23 |
| PGSC0003DMT400051266 | Potato | cytosol | 18.01 | 32.13 |
| CDY16639 | Canola | nucleus | 33.86 | 32.06 |
| CDX94586 | Canola | nucleus | 33.72 | 31.97 |
| CDX98703 | Canola | nucleus | 31.99 | 31.94 |
| Solyc11g022420.1.1 | Tomato | cytosol | 22.05 | 31.94 |
| Solyc04g025490.1.1 | Tomato | cytosol | 11.1 | 31.82 |
| Solyc05g015030.1.1 | Tomato | cytosol | 21.61 | 31.65 |
| Solyc09g060170.1.1 | Tomato | cytosol | 15.56 | 31.4 |
| CDY66622 | Canola | nucleus | 33.0 | 31.33 |
| CDX79091 | Canola | nucleus | 33.43 | 31.1 |
| Solyc08g062510.2.1 | Tomato | nucleus | 29.25 | 31.09 |
| Solyc07g026560.1.1 | Tomato | cytosol | 21.18 | 31.08 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 31.27 | 31.04 |
| CDX74762 | Canola | nucleus | 31.56 | 30.93 |
| PGSC0003DMT400036411 | Potato | nucleus | 23.34 | 30.86 |
| CDY06167 | Canola | nucleus | 31.99 | 30.83 |
| CDY18903 | Canola | nucleus | 31.27 | 30.78 |
| Solyc08g062520.2.1 | Tomato | cytosol | 22.62 | 30.72 |
| CDY31916 | Canola | nucleus | 29.68 | 30.61 |
| CDY00515 | Canola | nucleus | 29.54 | 30.46 |
| KRH42428 | Soybean | nucleus | 33.0 | 30.25 |
| CDY12213 | Canola | nucleus | 30.69 | 29.92 |
| CDY48272 | Canola | nucleus | 30.12 | 29.69 |
| CDY10041 | Canola | nucleus | 31.84 | 29.59 |
| CDX89415 | Canola | cytosol, mitochondrion | 7.49 | 29.21 |
| Solyc04g025480.1.1 | Tomato | cytosol | 27.09 | 28.7 |
| CDX74347 | Canola | nucleus | 32.71 | 28.63 |
| CDY71572 | Canola | nucleus | 16.14 | 28.5 |
| CDX91894 | Canola | nucleus | 32.56 | 28.46 |
| CDY51143 | Canola | nucleus | 32.28 | 28.35 |
| CDY07201 | Canola | nucleus | 31.99 | 28.17 |
| CDX67855 | Canola | nucleus | 31.12 | 27.69 |
| CDY45684 | Canola | nucleus | 31.27 | 27.68 |
| CDY30748 | Canola | endoplasmic reticulum | 23.2 | 27.43 |
| CDY49515 | Canola | plasma membrane | 31.7 | 27.13 |
| CDY19129 | Canola | nucleus | 27.81 | 26.55 |
| CDY46842 | Canola | nucleus | 31.7 | 26.51 |
| KRH42429 | Soybean | cytosol | 27.81 | 26.44 |
| CDY15339 | Canola | nucleus | 27.52 | 26.13 |
| CDX79408 | Canola | nucleus | 28.82 | 25.64 |
| CDX67929 | Canola | nucleus | 28.82 | 25.54 |
| CDX76559 | Canola | nucleus | 26.22 | 24.8 |
| CDY08866 | Canola | nucleus | 26.22 | 24.73 |
| CDY43458 | Canola | nucleus | 28.82 | 24.63 |
| CDX77711 | Canola | nucleus | 28.82 | 24.3 |
| CDY03177 | Canola | nucleus | 28.24 | 23.73 |
| CDY33492 | Canola | nucleus | 27.09 | 23.62 |
| TraesCSU01G150000.1 | Wheat | nucleus | 7.35 | 23.39 |
| CDX89416 | Canola | nucleus | 20.61 | 22.03 |
| TraesCSU01G244000.1 | Wheat | nucleus | 6.48 | 21.84 |
| CDX94443 | Canola | cytosol | 19.74 | 21.82 |
| CDY39874 | Canola | plasma membrane | 5.33 | 19.27 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 2.16 | 12.61 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078IJ28 | UniProt:A0A078IJ28 | EnsemblPlants:CDY49937 | ProteinID:CDY49937 |
| ProteinID:CDY49937.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00094107001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | UniParc:UPI0004EB034D | : | : | : |
Description
BnaCnng18470DBnaCnng18470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJ28]
Coordinates
chrLK032869:-:65434..70077
Molecular Weight (calculated)
78006.6 Da
IEP (calculated)
5.786
GRAVY (calculated)
-0.283
Length
694 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHNGGGNSS SEHTSVNAKK REKRTYHRHT FQQTQRLEAY FKECPNPEES QRLSLGEELN LEPDQIKFWF QNKRTQNKTQ IERNANILLR EENKKIKCEN
101: EAMLEALRIV TCPDCGGPPL GVERDHNFQN LGLANTFLTE KRDELANTVS MNQHQQNMVN LFASVQGQQI FDTHTSYGTI PNSLMNDPSN SVGSSTSQDI
201: QLQLISQMDI TQLSETATRA VEELKRLFVT EDLWVMSSID GTYVIDQESY EKFSHSIKHF RKLSARVESS KDVTLVPIEA TNLIEMFLDS EKWERLFPTI
301: VAKAMTIHKL GSELPINENC NNLQVIWEKL HILSPLVPPR EFMIVRCCQK IDEGIWIVAD VSQRIVDSDQ INPFCYKRPS GCLIRAFPGA HSEACLHCLD
401: LTCFSILKIE LLCGGSGYGA KRWTTTLERM CERMALSSIR TIPATDWSEA IATVEGRMSV MKLGERMVKN FNEMLAMSGK VDFPQQSKCG VRISIRMNHD
501: SGQPSGLVVS AASSFSVPIT PLQVFDSLLN NETRHQWDVL CYRSAVSVTA RILTGSNENN YITILLPTQR EDDVISMSQG PKRNMMMLQE CYMDALGGMI
601: VYAPLDMASM SLATSGEVDP LKIPILSSGF TISNDGRRSM VAEEGGTILT VVFQILVSED KRISGLNEQS VDTVTSLISS TVRNIKLLLN CPLE
101: EAMLEALRIV TCPDCGGPPL GVERDHNFQN LGLANTFLTE KRDELANTVS MNQHQQNMVN LFASVQGQQI FDTHTSYGTI PNSLMNDPSN SVGSSTSQDI
201: QLQLISQMDI TQLSETATRA VEELKRLFVT EDLWVMSSID GTYVIDQESY EKFSHSIKHF RKLSARVESS KDVTLVPIEA TNLIEMFLDS EKWERLFPTI
301: VAKAMTIHKL GSELPINENC NNLQVIWEKL HILSPLVPPR EFMIVRCCQK IDEGIWIVAD VSQRIVDSDQ INPFCYKRPS GCLIRAFPGA HSEACLHCLD
401: LTCFSILKIE LLCGGSGYGA KRWTTTLERM CERMALSSIR TIPATDWSEA IATVEGRMSV MKLGERMVKN FNEMLAMSGK VDFPQQSKCG VRISIRMNHD
501: SGQPSGLVVS AASSFSVPIT PLQVFDSLLN NETRHQWDVL CYRSAVSVTA RILTGSNENN YITILLPTQR EDDVISMSQG PKRNMMMLQE CYMDALGGMI
601: VYAPLDMASM SLATSGEVDP LKIPILSSGF TISNDGRRSM VAEEGGTILT VVFQILVSED KRISGLNEQS VDTVTSLISS TVRNIKLLLN CPLE
001: MDNNGGGSSG NEQYTSGDAK QNGKRTCHRH TPQQIQRLEA YFKECPHPDE RQRNQLCREL KLEPDQIKFW FQNKRTQSKT QEDRSTNVLL RGENETLQSD
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
Arabidopsis Description
HDG8Homeobox-leucine zipper protein HDG8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.