Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032003.1-P | Field mustard | nucleus | 62.8 | 63.72 |
| CDY43137 | Canola | nucleus | 62.52 | 63.43 |
| CDY42301 | Canola | nucleus | 62.23 | 63.04 |
| CDY67945 | Canola | nucleus | 62.09 | 62.99 |
| Bra020066.1-P | Field mustard | nucleus | 61.09 | 62.61 |
| Os06t0208100-00 | Rice | nucleus | 11.44 | 62.02 |
| CDY44946 | Canola | nucleus | 56.51 | 60.96 |
| CDY49937 | Canola | nucleus | 60.37 | 60.81 |
| CDY21211 | Canola | nucleus | 60.23 | 60.66 |
| Bra021363.1-P | Field mustard | nucleus | 62.52 | 60.11 |
| AT5G17320.1 | Thale cress | nucleus | 49.21 | 47.91 |
| AT1G34650.1 | Thale cress | nucleus | 47.64 | 47.03 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 45.92 | 44.96 |
| Solyc09g057530.1.1 | Tomato | cytosol | 8.44 | 43.07 |
| PGSC0003DMT400038820 | Potato | extracellular | 21.89 | 42.03 |
| Zm00001d018225_P001 | Maize | nucleus | 40.77 | 41.19 |
| Zm00001d052133_P001 | Maize | nucleus | 40.92 | 40.97 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 35.19 | 40.8 |
| Zm00001d044973_P001 | Maize | nucleus | 40.06 | 40.64 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 39.77 | 40.58 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 39.77 | 40.58 |
| Zm00001d037140_P004 | Maize | nucleus | 39.77 | 40.47 |
| EES05874 | Sorghum | nucleus | 40.49 | 40.03 |
| Solyc09g066070.2.1 | Tomato | cytosol | 24.61 | 39.91 |
| EER89393 | Sorghum | nucleus | 39.91 | 39.86 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 39.63 | 39.74 |
| Solyc10g018030.1.1 | Tomato | cytosol | 23.32 | 39.47 |
| KRH11810 | Soybean | nucleus | 40.2 | 39.41 |
| PGSC0003DMT400085057 | Potato | cytosol | 26.9 | 39.33 |
| PGSC0003DMT400051268 | Potato | cytosol | 28.04 | 39.28 |
| GSMUA_Achr10P... | Banana | nucleus | 39.91 | 39.24 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 38.2 | 39.21 |
| Solyc11g011940.1.1 | Tomato | nucleus | 40.06 | 39.05 |
| KRH36827 | Soybean | nucleus | 39.34 | 38.79 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 20.31 | 38.59 |
| Solyc04g025490.1.1 | Tomato | cytosol | 13.3 | 38.43 |
| AT1G17920.1 | Thale cress | nucleus | 37.77 | 38.43 |
| Solyc09g057540.2.1 | Tomato | cytosol | 27.04 | 38.03 |
| Os06t0207966-00 | Rice | plastid | 14.31 | 38.02 |
| GSMUA_Achr10P... | Banana | nucleus | 37.05 | 37.98 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 40.06 | 37.89 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 39.48 | 37.5 |
| Solyc09g060130.1.1 | Tomato | cytosol | 23.75 | 37.39 |
| Solyc09g066050.2.1 | Tomato | cytosol | 29.33 | 37.07 |
| AT1G73360.1 | Thale cress | nucleus | 38.05 | 36.84 |
| Solyc09g066030.1.1 | Tomato | nucleus | 37.91 | 36.65 |
| AT1G05230.5 | Thale cress | nucleus | 37.77 | 36.62 |
| AT4G04890.1 | Thale cress | nucleus | 38.77 | 36.47 |
| Solyc07g026560.1.1 | Tomato | cytosol | 24.61 | 36.36 |
| Solyc09g060170.1.1 | Tomato | cytosol | 17.88 | 36.34 |
| AT4G21750.3 | Thale cress | nucleus | 39.34 | 36.09 |
| PGSC0003DMT400051266 | Potato | cytosol | 20.03 | 35.99 |
| Solyc05g015030.1.1 | Tomato | cytosol | 24.32 | 35.87 |
| KRH36826 | Soybean | nucleus | 36.48 | 35.76 |
| Solyc11g022420.1.1 | Tomato | cytosol | 24.46 | 35.7 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 35.62 | 35.62 |
| Solyc07g026570.1.1 | Tomato | nucleus | 7.15 | 35.46 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 36.77 | 35.45 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 37.05 | 35.38 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 36.91 | 35.34 |
| Solyc07g037910.1.1 | Tomato | cytosol | 10.59 | 35.07 |
| Solyc08g062510.2.1 | Tomato | nucleus | 32.62 | 34.92 |
| Solyc10g018020.1.1 | Tomato | extracellular | 16.74 | 34.82 |
| PGSC0003DMT400036411 | Potato | nucleus | 25.75 | 34.29 |
| Solyc08g062520.2.1 | Tomato | cytosol | 24.18 | 33.07 |
| Solyc04g025480.1.1 | Tomato | cytosol | 30.47 | 32.52 |
| AT5G52170.2 | Thale cress | nucleus | 31.76 | 32.31 |
| AT4G00730.1 | Thale cress | nucleus | 36.77 | 32.04 |
| KRH42428 | Soybean | nucleus | 33.91 | 31.31 |
| AT2G32370.1 | Thale cress | nucleus | 31.19 | 30.07 |
| AT3G61150.1 | Thale cress | nucleus | 34.62 | 29.95 |
| AT4G17710.1 | Thale cress | nucleus | 30.19 | 29.76 |
| AT4G25530.1 | Thale cress | nucleus | 28.33 | 28.86 |
| AT1G79840.2 | Thale cress | nucleus, plastid | 31.76 | 28.61 |
| KRH42429 | Soybean | cytosol | 29.61 | 28.36 |
| AT5G46880.3 | Thale cress | nucleus | 32.9 | 27.84 |
| TraesCSU01G150000.1 | Wheat | nucleus | 8.01 | 25.69 |
| TraesCSU01G244000.1 | Wheat | nucleus | 7.01 | 23.79 |
| AT4G26920.1 | Thale cress | cytosol, plasma membrane, plastid | 14.02 | 21.26 |
| AT5G07260.1 | Thale cress | cytosol | 16.17 | 20.89 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 3.15 | 18.49 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | EntrezGene:821305 | ProteinID:AAF26121.1 | ProteinID:AEE73918.1 | EMBL:AK117867 |
| ArrayExpress:AT3G03260 | EnsemblPlantsGene:AT3G03260 | RefSeq:AT3G03260 | TAIR:AT3G03260 | RefSeq:AT3G03260-TAIR-G | EnsemblPlants:AT3G03260.1 |
| TAIR:AT3G03260.1 | Unigene:At.41007 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 |
| GO:GO:0009987 | Symbol:HDG8 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| RefSeq:NP_186976.2 | PFAM:PF00046 | PFAM:PF01852 | PO:PO:0009001 | PO:PO:0009009 | PO:PO:0009089 |
| PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 | UniProt:Q9M9P4 | SMART:SM00234 |
| SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | UniParc:UPI0000196AED | : |
Description
HDG8Homeobox-leucine zipper protein HDG8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P4]
Coordinates
chr3:-:755159..759282
Molecular Weight (calculated)
78430.7 Da
IEP (calculated)
6.318
GRAVY (calculated)
-0.371
Length
699 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNNGGGSSG NEQYTSGDAK QNGKRTCHRH TPQQIQRLEA YFKECPHPDE RQRNQLCREL KLEPDQIKFW FQNKRTQSKT QEDRSTNVLL RGENETLQSD
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.