Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g011940.1.1 | Tomato | nucleus | 91.19 | 86.61 |
| PGSC0003DMT400051268 | Potato | cytosol | 61.67 | 84.17 |
| PGSC0003DMT400051266 | Potato | cytosol | 40.53 | 70.95 |
| PGSC0003DMT400085057 | Potato | cytosol | 49.05 | 69.87 |
| PGSC0003DMT400036411 | Potato | nucleus | 52.57 | 68.19 |
| PGSC0003DMT400038820 | Potato | extracellular | 35.68 | 66.76 |
| Os06t0208100-00 | Rice | nucleus | 9.4 | 49.61 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 43.47 | 41.46 |
| CDY62389 | Canola | cytosol | 29.07 | 40.49 |
| KRH36827 | Soybean | nucleus | 41.41 | 39.77 |
| KRH11810 | Soybean | nucleus | 40.53 | 38.71 |
| CDY69499 | Canola | cytosol | 17.18 | 38.49 |
| AT3G03260.1 | Thale cress | nucleus | 39.21 | 38.2 |
| Bra023611.1-P | Field mustard | nucleus | 39.21 | 37.87 |
| CDX85461 | Canola | cytosol | 39.21 | 37.87 |
| KRH36826 | Soybean | nucleus | 38.77 | 37.03 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 36.71 | 36.5 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 36.71 | 36.5 |
| CDY53691 | Canola | nucleus | 38.03 | 36.48 |
| Bra003213.1-P | Field mustard | nucleus | 38.03 | 36.48 |
| Bra008562.1-P | Field mustard | cytosol, nucleus, plastid | 38.47 | 36.24 |
| GSMUA_Achr10P... | Banana | nucleus | 37.74 | 36.15 |
| PGSC0003DMT400069312 | Potato | nucleus | 37.89 | 36.08 |
| Zm00001d018225_P001 | Maize | nucleus | 36.56 | 35.98 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 36.71 | 35.87 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 31.72 | 35.82 |
| CDY02713 | Canola | nucleus | 38.77 | 35.72 |
| CDY16938 | Canola | nucleus | 34.51 | 35.61 |
| GSMUA_Achr10P... | Banana | nucleus | 35.39 | 35.34 |
| Zm00001d044973_P001 | Maize | nucleus | 35.68 | 35.27 |
| Bra032003.1-P | Field mustard | nucleus | 35.54 | 35.12 |
| Zm00001d052133_P001 | Maize | nucleus | 35.98 | 35.1 |
| CDY42301 | Canola | nucleus | 35.54 | 35.07 |
| EER89393 | Sorghum | nucleus | 35.98 | 35.0 |
| CDY43137 | Canola | nucleus | 35.39 | 34.98 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 37.74 | 34.92 |
| AT1G34650.1 | Thale cress | nucleus | 36.27 | 34.89 |
| EES05874 | Sorghum | nucleus | 36.12 | 34.79 |
| Zm00001d037140_P004 | Maize | nucleus | 35.1 | 34.79 |
| Bra020066.1-P | Field mustard | nucleus | 34.8 | 34.75 |
| CDY67945 | Canola | nucleus | 34.95 | 34.54 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 37.15 | 34.24 |
| AT5G17320.1 | Thale cress | nucleus | 35.98 | 34.12 |
| CDY44946 | Canola | nucleus | 32.45 | 34.1 |
| PGSC0003DMT400061859 | Potato | nucleus | 34.21 | 33.82 |
| CDY21211 | Canola | nucleus | 34.21 | 33.57 |
| CDY49937 | Canola | nucleus | 34.21 | 33.57 |
| Bra021363.1-P | Field mustard | nucleus | 35.83 | 33.56 |
| Os06t0207966-00 | Rice | plastid | 12.63 | 32.7 |
| PGSC0003DMT400029291 | Potato | nucleus | 33.19 | 32.42 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 33.92 | 31.86 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 33.92 | 31.64 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 33.92 | 31.56 |
| PGSC0003DMT400048971 | Potato | nucleus | 26.14 | 31.34 |
| PGSC0003DMT400005277 | Potato | nucleus | 32.89 | 30.56 |
| KRH42428 | Soybean | nucleus | 33.92 | 30.52 |
| PGSC0003DMT400006155 | Potato | nucleus | 32.75 | 29.19 |
| PGSC0003DMT400062468 | Potato | cytosol | 15.27 | 29.13 |
| PGSC0003DMT400094124 | Potato | nucleus | 32.16 | 28.97 |
| PGSC0003DMT400062470 | Potato | cytosol, nucleus, plastid | 12.92 | 28.95 |
| KRH42429 | Soybean | cytosol | 30.98 | 28.9 |
| PGSC0003DMT400076898 | Potato | cytosol | 19.97 | 27.47 |
| PGSC0003DMT400071377 | Potato | nucleus | 32.6 | 27.04 |
| PGSC0003DMT400019986 | Potato | nucleus | 31.86 | 26.82 |
| PGSC0003DMT400006770 | Potato | nucleus | 29.81 | 26.3 |
| PGSC0003DMT400037397 | Potato | cytosol | 18.94 | 26.27 |
| PGSC0003DMT400028197 | Potato | cytosol | 12.63 | 25.83 |
| PGSC0003DMT400042908 | Potato | nucleus | 18.65 | 25.5 |
| PGSC0003DMT400037055 | Potato | nucleus | 30.25 | 25.37 |
| PGSC0003DMT400086035 | Potato | nucleus | 23.49 | 24.35 |
| PGSC0003DMT400095083 | Potato | cytosol | 4.26 | 23.97 |
| PGSC0003DMT400080861 | Potato | nucleus | 16.01 | 23.75 |
| PGSC0003DMT400033830 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 11.75 | 22.73 |
| PGSC0003DMT400076902 | Potato | nucleus | 22.03 | 22.39 |
| PGSC0003DMT400028195 | Potato | nucleus | 12.19 | 21.78 |
| PGSC0003DMT400095329 | Potato | cytosol | 8.52 | 21.01 |
| PGSC0003DMT400092271 | Potato | nucleus | 7.78 | 20.0 |
| TraesCSU01G150000.1 | Wheat | nucleus | 5.58 | 17.43 |
| TraesCSU01G244000.1 | Wheat | nucleus | 4.41 | 14.56 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008289 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 |
| UniProt:M1B0T3 | PFAM:PF00046 | PFAM:PF01852 | EnsemblPlantsGene:PGSC0003DMG400013263 | PGSC:PGSC0003DMG400013263 | EnsemblPlants:PGSC0003DMT400034503 |
| PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 | SMART:SM00234 | SMART:SM00389 |
| SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0002968219 | SEG:seg |
Description
Homeodomain protein HOX3 [Source:PGSC_GENE;Acc:PGSC0003DMG400013263]
Coordinates
chr11:-:823179..831272
Molecular Weight (calculated)
77308.3 Da
IEP (calculated)
6.712
GRAVY (calculated)
-0.421
Length
681 amino acids
Sequence
(BLAST)
(BLAST)
001: FFKECPHPDE NQRNQLGREA GLDPKQIKFW FQNKRTQTKT QNERSDNNAL RTENERFLCE NMAMKESMKN IMCPKCDGPP IGKEERARNL ENMKMENQRL
101: REQHEKISNF LSNVLGRSFV MGSNLAPPKS TLQTSSNSSD ESLLSQICSS PIGYPPQENN HNNNNGRAHS ININNIPIMS PSRQEHYEFH HDNRQKTDMF
201: EIVVASMNEM FELLQMNDPI WVDSSSDGGC FIHRESYERI FPNLNRPYKS ATARIESSKD CGVVSMTAIE LIHSFLDPVK WMNLFPTIVT KARTIEVLDS
301: GTLGGSIQLM YEKLHILSPL VEARDFFFIR YCRQIDPTTW IMVDVSYDLF NEIQSGVPPY SWKFPSGCAI QDMGNGQSMV TWVEHVQVDE KKQVNHIFRD
401: LLCDRQTYGA KRWIVTLQRM SERHNFAMGA TCPTRNDFKG VFNDPEGLKN TIQISQRMVK SFFEILNMTD KLDFPTSSQL NSGDRISIRK NEEITQTKGF
501: IATAATSLWI PLSFQDVFNF FKDDKTRSQW DILTGGLKVM ELARVPTGTF PGNCITIIQS YMQKEKLVLQ ESSIDEMGAF LIFAPIELPT ITSIVNGHDA
601: TKVPILPSGI IISPDGRLVS NRGNTGNAQN GSILTVTFQI LICDNINSSI SQQQHMEAVT SIHSLLSTTI LKIKAALGCS D
101: REQHEKISNF LSNVLGRSFV MGSNLAPPKS TLQTSSNSSD ESLLSQICSS PIGYPPQENN HNNNNGRAHS ININNIPIMS PSRQEHYEFH HDNRQKTDMF
201: EIVVASMNEM FELLQMNDPI WVDSSSDGGC FIHRESYERI FPNLNRPYKS ATARIESSKD CGVVSMTAIE LIHSFLDPVK WMNLFPTIVT KARTIEVLDS
301: GTLGGSIQLM YEKLHILSPL VEARDFFFIR YCRQIDPTTW IMVDVSYDLF NEIQSGVPPY SWKFPSGCAI QDMGNGQSMV TWVEHVQVDE KKQVNHIFRD
401: LLCDRQTYGA KRWIVTLQRM SERHNFAMGA TCPTRNDFKG VFNDPEGLKN TIQISQRMVK SFFEILNMTD KLDFPTSSQL NSGDRISIRK NEEITQTKGF
501: IATAATSLWI PLSFQDVFNF FKDDKTRSQW DILTGGLKVM ELARVPTGTF PGNCITIIQS YMQKEKLVLQ ESSIDEMGAF LIFAPIELPT ITSIVNGHDA
601: TKVPILPSGI IISPDGRLVS NRGNTGNAQN GSILTVTFQI LICDNINSSI SQQQHMEAVT SIHSLLSTTI LKIKAALGCS D
001: MDNNGGGSSG NEQYTSGDAK QNGKRTCHRH TPQQIQRLEA YFKECPHPDE RQRNQLCREL KLEPDQIKFW FQNKRTQSKT QEDRSTNVLL RGENETLQSD
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
Arabidopsis Description
HDG8Homeobox-leucine zipper protein HDG8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.