Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49937 | Canola | nucleus | 96.97 | 96.97 |
| Bra021363.1-P | Field mustard | nucleus | 99.71 | 95.19 |
| CDY42301 | Canola | nucleus | 65.56 | 65.94 |
| CDY43137 | Canola | nucleus | 64.84 | 65.31 |
| CDY67945 | Canola | nucleus | 64.84 | 65.31 |
| CDY44946 | Canola | nucleus | 60.95 | 65.28 |
| AT3G03260.1 | Thale cress | nucleus | 60.66 | 60.23 |
| Os06t0208100-00 | Rice | nucleus | 10.52 | 56.59 |
| CDY62389 | Canola | cytosol | 33.57 | 47.65 |
| CDX85461 | Canola | cytosol | 47.55 | 46.81 |
| CDY53691 | Canola | nucleus | 46.54 | 45.49 |
| CDY69499 | Canola | cytosol | 19.6 | 44.74 |
| CDY02713 | Canola | nucleus | 47.55 | 44.65 |
| CDY16938 | Canola | nucleus | 41.5 | 43.64 |
| Solyc09g057530.1.1 | Tomato | cytosol | 7.78 | 39.42 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 40.06 | 38.94 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 36.6 | 37.08 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 36.6 | 37.08 |
| Zm00001d018225_P001 | Maize | nucleus | 36.74 | 36.85 |
| Zm00001d052133_P001 | Maize | nucleus | 37.03 | 36.82 |
| PGSC0003DMT400038820 | Potato | extracellular | 19.16 | 36.54 |
| GSMUA_Achr10P... | Banana | nucleus | 37.32 | 36.43 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 36.31 | 36.15 |
| Zm00001d044973_P001 | Maize | nucleus | 35.88 | 36.14 |
| EES05874 | Sorghum | nucleus | 36.74 | 36.07 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 31.12 | 35.82 |
| Os06t0207966-00 | Rice | plastid | 13.54 | 35.74 |
| Zm00001d037140_P004 | Maize | nucleus | 35.3 | 35.66 |
| CDX96744 | Canola | nucleus | 34.29 | 35.36 |
| Solyc11g011940.1.1 | Tomato | nucleus | 36.46 | 35.29 |
| PGSC0003DMT400085057 | Potato | cytosol | 24.21 | 35.15 |
| EER89393 | Sorghum | nucleus | 35.45 | 35.14 |
| Solyc09g066070.2.1 | Tomato | cytosol | 21.76 | 35.03 |
| KRH11810 | Soybean | nucleus | 35.88 | 34.92 |
| GSMUA_Achr10P... | Banana | nucleus | 34.29 | 34.9 |
| PGSC0003DMT400051268 | Potato | cytosol | 24.93 | 34.67 |
| CDX83884 | Canola | nucleus | 34.15 | 34.6 |
| KRH36827 | Soybean | nucleus | 35.3 | 34.56 |
| Solyc09g057540.2.1 | Tomato | cytosol | 24.64 | 34.41 |
| Solyc10g018030.1.1 | Tomato | cytosol | 20.46 | 34.38 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 36.6 | 34.37 |
| CDY11109 | Canola | nucleus | 35.01 | 34.23 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 33.57 | 34.21 |
| CDX72984 | Canola | nucleus | 35.01 | 33.99 |
| CDX96471 | Canola | nucleus | 35.16 | 33.98 |
| CDX68229 | Canola | nucleus | 34.29 | 33.85 |
| CDY42097 | Canola | nucleus | 25.22 | 33.85 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 35.88 | 33.83 |
| Solyc09g060130.1.1 | Tomato | cytosol | 21.61 | 33.78 |
| Solyc09g066030.1.1 | Tomato | nucleus | 34.87 | 33.47 |
| CDY27417 | Canola | nucleus | 34.29 | 33.33 |
| CDX76399 | Canola | nucleus | 34.29 | 33.29 |
| KRH36826 | Soybean | nucleus | 34.01 | 33.1 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 17.44 | 32.88 |
| CDY19185 | Canola | nucleus | 32.28 | 32.84 |
| CDX90879 | Canola | nucleus | 33.86 | 32.82 |
| CDY21319 | Canola | nucleus | 33.86 | 32.82 |
| CDY26204 | Canola | nucleus | 30.12 | 32.81 |
| Solyc10g018020.1.1 | Tomato | extracellular | 15.85 | 32.74 |
| Solyc07g037910.1.1 | Tomato | cytosol | 9.94 | 32.7 |
| Solyc07g026570.1.1 | Tomato | nucleus | 6.63 | 32.62 |
| CDY26205 | Canola | nucleus | 32.42 | 32.61 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 34.01 | 32.55 |
| Solyc09g066050.2.1 | Tomato | cytosol | 25.94 | 32.55 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 34.15 | 32.38 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 34.01 | 32.33 |
| CDX94054 | Canola | nucleus | 32.28 | 32.23 |
| CDY16639 | Canola | nucleus | 33.86 | 32.06 |
| CDX94586 | Canola | nucleus | 33.72 | 31.97 |
| CDX98703 | Canola | nucleus | 31.99 | 31.94 |
| Solyc11g022420.1.1 | Tomato | cytosol | 22.05 | 31.94 |
| PGSC0003DMT400051266 | Potato | cytosol | 17.87 | 31.88 |
| CDY23096 | Canola | nucleus | 6.05 | 31.82 |
| Solyc04g025490.1.1 | Tomato | cytosol | 11.1 | 31.82 |
| CDY66622 | Canola | nucleus | 32.85 | 31.19 |
| Solyc09g060170.1.1 | Tomato | cytosol | 15.42 | 31.1 |
| CDX79091 | Canola | nucleus | 33.43 | 31.1 |
| Solyc07g026560.1.1 | Tomato | cytosol | 21.18 | 31.08 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 31.12 | 30.9 |
| PGSC0003DMT400036411 | Potato | nucleus | 23.34 | 30.86 |
| Solyc05g015030.1.1 | Tomato | cytosol | 21.04 | 30.8 |
| CDX74762 | Canola | nucleus | 31.27 | 30.65 |
| Solyc08g062510.2.1 | Tomato | nucleus | 28.82 | 30.63 |
| CDY31916 | Canola | nucleus | 29.68 | 30.61 |
| CDY06167 | Canola | nucleus | 31.7 | 30.56 |
| Solyc08g062520.2.1 | Tomato | cytosol | 22.48 | 30.53 |
| CDY18903 | Canola | nucleus | 30.98 | 30.5 |
| CDY00515 | Canola | nucleus | 29.54 | 30.46 |
| KRH42428 | Soybean | nucleus | 32.85 | 30.12 |
| CDX89415 | Canola | cytosol, mitochondrion | 7.64 | 29.78 |
| CDY12213 | Canola | nucleus | 30.4 | 29.63 |
| CDY10041 | Canola | nucleus | 31.56 | 29.32 |
| CDY48272 | Canola | nucleus | 29.68 | 29.26 |
| Solyc04g025480.1.1 | Tomato | cytosol | 27.23 | 28.86 |
| CDX74347 | Canola | nucleus | 32.56 | 28.5 |
| CDX91894 | Canola | nucleus | 32.42 | 28.34 |
| CDY71572 | Canola | nucleus | 15.99 | 28.24 |
| CDY51143 | Canola | nucleus | 32.13 | 28.23 |
| CDY07201 | Canola | nucleus | 31.84 | 28.05 |
| CDX67855 | Canola | nucleus | 30.84 | 27.44 |
| CDY45684 | Canola | nucleus | 30.98 | 27.42 |
| CDY30748 | Canola | endoplasmic reticulum | 23.05 | 27.26 |
| CDY49515 | Canola | plasma membrane | 31.41 | 26.88 |
| CDY46842 | Canola | nucleus | 31.41 | 26.27 |
| KRH42429 | Soybean | cytosol | 27.52 | 26.16 |
| CDY19129 | Canola | nucleus | 27.23 | 26.0 |
| CDY15339 | Canola | nucleus | 27.09 | 25.72 |
| CDX79408 | Canola | nucleus | 28.39 | 25.26 |
| CDX67929 | Canola | nucleus | 28.39 | 25.16 |
| CDX76559 | Canola | nucleus | 25.79 | 24.39 |
| CDY08866 | Canola | nucleus | 25.79 | 24.32 |
| CDY43458 | Canola | nucleus | 28.1 | 24.01 |
| CDX77711 | Canola | nucleus | 28.1 | 23.69 |
| TraesCSU01G150000.1 | Wheat | nucleus | 7.35 | 23.39 |
| CDY03177 | Canola | nucleus | 27.52 | 23.12 |
| CDY33492 | Canola | nucleus | 26.37 | 22.99 |
| CDX89416 | Canola | nucleus | 20.75 | 22.19 |
| TraesCSU01G244000.1 | Wheat | nucleus | 6.48 | 21.84 |
| CDX94443 | Canola | cytosol | 19.74 | 21.82 |
| CDY39874 | Canola | plasma membrane | 5.33 | 19.27 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 2.16 | 12.61 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078G715 | UniProt:A0A078G715 | EnsemblPlants:CDY21211 | ProteinID:CDY21211 |
| ProteinID:CDY21211.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00015423001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | UniParc:UPI0004EE6745 | : | : | : |
Description
BnaA01g34420DBnaA01g34420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G715]
Coordinates
chrLK032116:+:646996..651862
Molecular Weight (calculated)
78148.8 Da
IEP (calculated)
5.440
GRAVY (calculated)
-0.261
Length
694 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHNDGGNSS SEHTSVNAKK REKRTYRRHT FQQTQRLEAY FMECPNPEES QRLSLGEELN LEPDQIKFWF QNKRTQNKTQ IERNANILLR EENKKIKCEN
101: EAMLEALRIV TCPDCGGPPL GVERGHNFQN LSLVNTFLTE QRDEMANTVS MNQHQQNMVN LFASVQGQQI FDTHTSYGTI PNSLMNDPSN SVGSSTSQDI
201: QLQLISQMDI TQLSETATRA VEELKRLFVT EDLWVMSSID GTYVIDQESY EKFSHSIKHF RKLSARVESS KDVTVVPIEA TNLIEMFLDS EKWKSLFPTI
301: VAKAMTIHKL GSELPINENC NNLQVIWEKL HILSPLVPPR EFMIVRCCQK IDEGIWIVAD VSQRIVDSDQ INSFCYKRPS GCLIRAFPGA HSEACLHCLD
401: LTCFSILKIE LLCGGSGYGA KRWTTTLERM CERMALSSIL TIPATDWSEA IATVEGRMSV MKLGERMVMN FNEMLTMSGK VDFPQQSKCG VRISIRMNHD
501: SGQPSGLVVS AASSFSVPIT PLQVFDSLLN NETRHQWDVL CYRSAVSVTA RILTGYNENN YITILQPTQR EDDVISMSQG PTRNMMMLQE CYMDALGGMI
601: VYAPLDMASM SLATSGEVDP LKIPILSSGF TISNDGRRSM VAEEGGTILT VVFQILVSED RRIRGLTEQS VDTVTSLISS TVRNIKLLLN CPLE
101: EAMLEALRIV TCPDCGGPPL GVERGHNFQN LSLVNTFLTE QRDEMANTVS MNQHQQNMVN LFASVQGQQI FDTHTSYGTI PNSLMNDPSN SVGSSTSQDI
201: QLQLISQMDI TQLSETATRA VEELKRLFVT EDLWVMSSID GTYVIDQESY EKFSHSIKHF RKLSARVESS KDVTVVPIEA TNLIEMFLDS EKWKSLFPTI
301: VAKAMTIHKL GSELPINENC NNLQVIWEKL HILSPLVPPR EFMIVRCCQK IDEGIWIVAD VSQRIVDSDQ INSFCYKRPS GCLIRAFPGA HSEACLHCLD
401: LTCFSILKIE LLCGGSGYGA KRWTTTLERM CERMALSSIL TIPATDWSEA IATVEGRMSV MKLGERMVMN FNEMLTMSGK VDFPQQSKCG VRISIRMNHD
501: SGQPSGLVVS AASSFSVPIT PLQVFDSLLN NETRHQWDVL CYRSAVSVTA RILTGYNENN YITILQPTQR EDDVISMSQG PTRNMMMLQE CYMDALGGMI
601: VYAPLDMASM SLATSGEVDP LKIPILSSGF TISNDGRRSM VAEEGGTILT VVFQILVSED RRIRGLTEQS VDTVTSLISS TVRNIKLLLN CPLE
001: MDNNGGGSSG NEQYTSGDAK QNGKRTCHRH TPQQIQRLEA YFKECPHPDE RQRNQLCREL KLEPDQIKFW FQNKRTQSKT QEDRSTNVLL RGENETLQSD
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC
Arabidopsis Description
HDG8Homeobox-leucine zipper protein HDG8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.