Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013556.1-P | Field mustard | nucleus | 89.95 | 97.25 |
| CDY66622 | Canola | nucleus | 93.16 | 95.08 |
| CDY27417 | Canola | nucleus | 87.4 | 91.32 |
| CDX98703 | Canola | nucleus | 84.32 | 90.5 |
| CDY23096 | Canola | nucleus | 15.95 | 90.15 |
| CDX76399 | Canola | nucleus | 86.19 | 89.93 |
| CDX94054 | Canola | nucleus | 83.65 | 89.78 |
| AT4G21750.3 | Thale cress | nucleus | 89.95 | 88.06 |
| CDX90879 | Canola | nucleus | 82.44 | 85.89 |
| CDY21319 | Canola | nucleus | 82.17 | 85.61 |
| CDY16639 | Canola | nucleus | 82.57 | 84.04 |
| CDX94586 | Canola | nucleus | 82.44 | 84.02 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 66.62 | 75.3 |
| KRH27601 | Soybean | nucleus | 73.86 | 75.27 |
| KRH77881 | Soybean | nucleus | 73.46 | 74.97 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 57.37 | 73.04 |
| CDY06167 | Canola | nucleus | 67.56 | 70.0 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 66.89 | 68.73 |
| CDY10041 | Canola | nucleus | 67.43 | 67.34 |
| EES11464 | Sorghum | nucleus | 69.97 | 66.16 |
| EES13460 | Sorghum | mitochondrion, nucleus | 68.36 | 65.3 |
| GSMUA_Achr10P... | Banana | nucleus | 61.93 | 64.62 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 66.89 | 64.3 |
| Zm00001d049443_P005 | Maize | nucleus | 68.5 | 64.2 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 66.62 | 64.13 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 66.62 | 63.96 |
| CDY71572 | Canola | nucleus | 33.51 | 63.61 |
| Zm00001d002234_P003 | Maize | nucleus | 67.56 | 63.48 |
| GSMUA_Achr11P... | Banana | plastid | 66.09 | 62.48 |
| Os08t0136100-01 | Rice | nucleus | 65.55 | 62.29 |
| CDY49515 | Canola | plasma membrane | 67.43 | 62.02 |
| Zm00001d026351_P003 | Maize | nucleus | 69.57 | 61.49 |
| Zm00001d000247_P001 | Maize | plasma membrane | 58.85 | 61.06 |
| CDY46842 | Canola | nucleus | 67.29 | 60.48 |
| Zm00001d024701_P001 | Maize | nucleus | 63.81 | 59.72 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 63.4 | 59.42 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 63.27 | 59.3 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 63.4 | 59.27 |
| EES14500 | Sorghum | nucleus | 64.48 | 59.09 |
| CDY12213 | Canola | nucleus | 47.32 | 49.58 |
| CDY48272 | Canola | nucleus | 46.25 | 49.01 |
| CDX96744 | Canola | nucleus | 43.3 | 47.99 |
| CDY18903 | Canola | nucleus | 45.31 | 47.94 |
| CDY51143 | Canola | nucleus | 50.67 | 47.85 |
| CDY30748 | Canola | endoplasmic reticulum | 37.53 | 47.7 |
| CDX74762 | Canola | nucleus | 45.17 | 47.6 |
| CDY07201 | Canola | nucleus | 50.13 | 47.46 |
| CDX74347 | Canola | nucleus | 50.0 | 47.04 |
| CDX67855 | Canola | nucleus | 48.93 | 46.79 |
| CDY26204 | Canola | nucleus | 39.95 | 46.78 |
| CDX91894 | Canola | nucleus | 49.73 | 46.73 |
| CDX83884 | Canola | nucleus | 42.9 | 46.72 |
| CDY19129 | Canola | nucleus | 45.44 | 46.63 |
| CDY45684 | Canola | nucleus | 48.93 | 46.56 |
| CDY15339 | Canola | nucleus | 45.04 | 45.96 |
| CDY19185 | Canola | nucleus | 41.82 | 45.75 |
| CDY42097 | Canola | nucleus | 31.64 | 45.65 |
| CDY31916 | Canola | nucleus | 41.15 | 45.62 |
| CDX68229 | Canola | nucleus | 42.76 | 45.38 |
| CDY26205 | Canola | nucleus | 41.96 | 45.36 |
| CDY11109 | Canola | nucleus | 43.03 | 45.21 |
| CDX96471 | Canola | nucleus | 43.3 | 44.99 |
| CDY00515 | Canola | nucleus | 40.48 | 44.87 |
| CDX72984 | Canola | nucleus | 42.76 | 44.62 |
| Os08t0187500-01 | Rice | nucleus | 18.5 | 42.33 |
| CDX89415 | Canola | cytosol, mitochondrion | 9.65 | 40.45 |
| CDY43458 | Canola | nucleus | 41.69 | 38.3 |
| CDY03177 | Canola | nucleus | 41.82 | 37.77 |
| CDX76559 | Canola | nucleus | 37.13 | 37.74 |
| CDY39874 | Canola | plasma membrane | 9.65 | 37.5 |
| CDY08866 | Canola | nucleus | 36.86 | 37.36 |
| CDX77711 | Canola | nucleus | 41.15 | 37.3 |
| CDX79408 | Canola | nucleus | 38.74 | 37.05 |
| CDX67929 | Canola | nucleus | 38.87 | 37.04 |
| CDY33492 | Canola | nucleus | 39.41 | 36.93 |
| CDX85461 | Canola | cytosol | 33.38 | 35.32 |
| CDY42301 | Canola | nucleus | 32.57 | 35.22 |
| CDY67945 | Canola | nucleus | 31.77 | 34.4 |
| CDY44946 | Canola | nucleus | 29.62 | 34.1 |
| CDY62389 | Canola | cytosol | 22.25 | 33.95 |
| CDY53691 | Canola | nucleus | 32.31 | 33.94 |
| CDY69499 | Canola | cytosol | 13.81 | 33.88 |
| CDY43137 | Canola | nucleus | 31.23 | 33.82 |
| CDY02713 | Canola | nucleus | 33.38 | 33.69 |
| CDY49937 | Canola | nucleus | 31.1 | 33.43 |
| CDY21211 | Canola | nucleus | 31.1 | 33.43 |
| CDY16938 | Canola | nucleus | 29.49 | 33.33 |
| CDX89416 | Canola | nucleus | 26.68 | 30.66 |
| CDX94443 | Canola | cytosol | 24.4 | 28.98 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078CPH9 | EnsemblPlants:CDX79091 | ProteinID:CDX79091 | ProteinID:CDX79091.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00131633001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF320 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START_lipid-bd_dom | UniParc:UPI0004EE4262 | SEG:seg | : | : | : |
Description
BnaA01g11580D
Coordinates
chrLK031816:+:1741699..1744776
Molecular Weight (calculated)
82200.7 Da
IEP (calculated)
5.935
GRAVY (calculated)
-0.358
Length
746 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHPNMFESH QHMFDMTPKE SGNDLGLTGS REDDFETKSG AEVTMENLLE EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELN
101: LEPLQIKFWF QNKRTQMKAQ HERHDNSILK ADNDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISSIAA KYVGKPLLPH
201: SSPSTQLTSS HYIPSRSLGL EVGNFGTNHQ TSFVGEMHGT SDIMRSVSIP CEADKPMIVE LAVAALEELV TMAQTGDPLW GLNDNLGEIL NEEEYFRMFP
301: RGIGPKPIGF RSEASRESTV VIMNHINLVE ILMNVNQYSS VFCGIVSRAL TLEVLSTGIA GNYNGALQVM TAEFQVPSPL VPTRENYFLR YCKQHGDNTW
401: AVVDVSLDNL RPSPITRSRR RPSGCLIQEL QNGYSKVTWV EHMEVDDRSV HTMYKPLVNT GLAFGAKRWV ATLDRQCERL ASSMASNIPT GDLSVITSPE
501: GRKSMLKLAE RMVMSFFSGV GASTAHAWTT LATTGSDDVR VMTRKSMDDP GRPPGIVLSA ATSFWIPVAP KRVFDFLRDE NSRSEWDILS NGGLVQKMAH
601: IANGRDPGNS ISLLRVNDTN SGPSNMLILQ ESCTDVSGSY VIYAPVDMTA MDVVLSGGDP DYVALLPSGF AILPDGGEGG NASAGAEGGG NNRVVVNAGS
701: LLTVAFQIIV DSVPTAKLSL GSVATVNSLI KCTVERIKGA LACDGA
101: LEPLQIKFWF QNKRTQMKAQ HERHDNSILK ADNDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISSIAA KYVGKPLLPH
201: SSPSTQLTSS HYIPSRSLGL EVGNFGTNHQ TSFVGEMHGT SDIMRSVSIP CEADKPMIVE LAVAALEELV TMAQTGDPLW GLNDNLGEIL NEEEYFRMFP
301: RGIGPKPIGF RSEASRESTV VIMNHINLVE ILMNVNQYSS VFCGIVSRAL TLEVLSTGIA GNYNGALQVM TAEFQVPSPL VPTRENYFLR YCKQHGDNTW
401: AVVDVSLDNL RPSPITRSRR RPSGCLIQEL QNGYSKVTWV EHMEVDDRSV HTMYKPLVNT GLAFGAKRWV ATLDRQCERL ASSMASNIPT GDLSVITSPE
501: GRKSMLKLAE RMVMSFFSGV GASTAHAWTT LATTGSDDVR VMTRKSMDDP GRPPGIVLSA ATSFWIPVAP KRVFDFLRDE NSRSEWDILS NGGLVQKMAH
601: IANGRDPGNS ISLLRVNDTN SGPSNMLILQ ESCTDVSGSY VIYAPVDMTA MDVVLSGGDP DYVALLPSGF AILPDGGEGG NASAGAEGGG NNRVVVNAGS
701: LLTVAFQIIV DSVPTAKLSL GSVATVNSLI KCTVERIKGA LACDGA
001: MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
Arabidopsis Description
ATML1ATML1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ61]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.