Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16639 | Canola | nucleus | 98.91 | 98.77 |
| Bra029527.1-P | Field mustard | nucleus | 99.04 | 97.32 |
| CDY21319 | Canola | nucleus | 93.31 | 95.39 |
| CDX90879 | Canola | nucleus | 93.31 | 95.39 |
| AT4G04890.1 | Thale cress | nucleus | 93.99 | 92.6 |
| CDX98703 | Canola | nucleus | 82.79 | 87.19 |
| CDX94054 | Canola | nucleus | 82.38 | 86.76 |
| CDY27417 | Canola | nucleus | 84.02 | 86.13 |
| CDY23096 | Canola | nucleus | 15.44 | 85.61 |
| CDX76399 | Canola | nucleus | 83.61 | 85.59 |
| CDY66622 | Canola | nucleus | 82.79 | 82.9 |
| CDX79091 | Canola | nucleus | 84.02 | 82.44 |
| KRH27601 | Soybean | nucleus | 77.87 | 77.87 |
| KRH77881 | Soybean | nucleus | 77.05 | 77.15 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 69.13 | 76.67 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 60.11 | 75.09 |
| CDY06167 | Canola | nucleus | 71.17 | 72.36 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 69.26 | 69.83 |
| CDY10041 | Canola | nucleus | 70.77 | 69.34 |
| EES11464 | Sorghum | nucleus | 72.95 | 67.68 |
| EES13460 | Sorghum | mitochondrion, nucleus | 71.45 | 66.97 |
| GSMUA_Achr10P... | Banana | nucleus | 65.3 | 66.85 |
| CDY71572 | Canola | nucleus | 35.66 | 66.41 |
| Zm00001d049443_P005 | Maize | nucleus | 71.86 | 66.08 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 69.67 | 65.72 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 69.4 | 65.55 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 69.4 | 65.38 |
| Os08t0136100-01 | Rice | nucleus | 69.54 | 64.84 |
| Zm00001d002234_P003 | Maize | nucleus | 69.95 | 64.48 |
| GSMUA_Achr11P... | Banana | plastid | 69.26 | 64.26 |
| CDY49515 | Canola | plasma membrane | 70.9 | 64.0 |
| Zm00001d026351_P003 | Maize | nucleus | 72.54 | 62.91 |
| CDY46842 | Canola | nucleus | 70.77 | 62.41 |
| Zm00001d000247_P001 | Maize | plasma membrane | 60.93 | 62.03 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 66.94 | 61.56 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 67.08 | 61.53 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 66.8 | 61.43 |
| Zm00001d024701_P001 | Maize | nucleus | 66.67 | 61.23 |
| EES14500 | Sorghum | nucleus | 66.8 | 60.07 |
| CDY12213 | Canola | nucleus | 48.5 | 49.86 |
| CDY18903 | Canola | nucleus | 47.95 | 49.79 |
| CDY48272 | Canola | nucleus | 47.81 | 49.72 |
| CDY51143 | Canola | nucleus | 53.28 | 49.37 |
| CDX74762 | Canola | nucleus | 47.68 | 49.29 |
| CDY07201 | Canola | nucleus | 52.73 | 48.98 |
| CDX74347 | Canola | nucleus | 53.01 | 48.93 |
| CDX91894 | Canola | nucleus | 52.87 | 48.74 |
| CDX96744 | Canola | nucleus | 44.54 | 48.44 |
| CDY30748 | Canola | endoplasmic reticulum | 38.8 | 48.38 |
| CDX67855 | Canola | nucleus | 51.09 | 47.95 |
| CDY19129 | Canola | nucleus | 47.54 | 47.87 |
| CDY45684 | Canola | nucleus | 51.23 | 47.83 |
| CDY15339 | Canola | nucleus | 47.4 | 47.47 |
| CDY26204 | Canola | nucleus | 41.12 | 47.25 |
| CDX83884 | Canola | nucleus | 44.13 | 47.15 |
| CDY31916 | Canola | nucleus | 43.17 | 46.95 |
| CDY00515 | Canola | nucleus | 42.9 | 46.66 |
| CDY19185 | Canola | nucleus | 43.31 | 46.48 |
| CDY26205 | Canola | nucleus | 43.17 | 45.8 |
| CDX68229 | Canola | nucleus | 43.85 | 45.66 |
| CDY42097 | Canola | nucleus | 32.24 | 45.65 |
| CDY11109 | Canola | nucleus | 43.99 | 45.35 |
| CDX96471 | Canola | nucleus | 43.99 | 44.85 |
| CDX72984 | Canola | nucleus | 43.72 | 44.76 |
| Os08t0187500-01 | Rice | nucleus | 19.26 | 43.25 |
| CDX89415 | Canola | cytosol, mitochondrion | 10.38 | 42.7 |
| CDY43458 | Canola | nucleus | 43.72 | 39.41 |
| CDY03177 | Canola | nucleus | 43.99 | 38.98 |
| CDX77711 | Canola | nucleus | 42.49 | 37.79 |
| CDY33492 | Canola | nucleus | 40.98 | 37.69 |
| CDX76559 | Canola | nucleus | 37.16 | 37.06 |
| CDX67929 | Canola | nucleus | 39.48 | 36.91 |
| CDX79408 | Canola | nucleus | 39.21 | 36.79 |
| CDY08866 | Canola | nucleus | 36.75 | 36.55 |
| CDY39874 | Canola | plasma membrane | 9.56 | 36.46 |
| CDX85461 | Canola | cytosol | 34.29 | 35.6 |
| CDY42301 | Canola | nucleus | 33.33 | 35.36 |
| CDY67945 | Canola | nucleus | 33.2 | 35.27 |
| CDY62389 | Canola | cytosol | 23.22 | 34.76 |
| CDY43137 | Canola | nucleus | 32.65 | 34.69 |
| CDY44946 | Canola | nucleus | 30.6 | 34.57 |
| CDY53691 | Canola | nucleus | 33.33 | 34.37 |
| CDY02713 | Canola | nucleus | 34.29 | 33.96 |
| CDY69499 | Canola | cytosol | 14.07 | 33.88 |
| CDY49937 | Canola | nucleus | 31.97 | 33.72 |
| CDY21211 | Canola | nucleus | 31.97 | 33.72 |
| CDY16938 | Canola | nucleus | 30.19 | 33.48 |
| CDX89416 | Canola | nucleus | 27.87 | 31.43 |
| CDX94443 | Canola | cytosol | 25.96 | 30.25 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078DZJ8 | EnsemblPlants:CDX94586 | ProteinID:CDX94586 | ProteinID:CDX94586.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00157869001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF320 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START_lipid-bd_dom | UniParc:UPI0004EE2FD0 | SEG:seg | : | : | : |
Description
BnaC09g22500D
Coordinates
chrLK031882:-:1391801..1398056
Molecular Weight (calculated)
80468.6 Da
IEP (calculated)
5.757
GRAVY (calculated)
-0.314
Length
732 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHPSMFESH HMFDMTTKST SDNDLGITGS REDEFETKSG TEVTTENPSG EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLC
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENVRLRE EIDRISAIAA KYVGKPVGSS
201: FAPLEIHAPS RSLELEVGNF GNQTTGFVGD MYGTGDILRS VSIPSDTDKP MIVELAVAAM EELVRMAQAG DPLWVSTGNS MDLPNEEEDF RTFPRGIGPK
301: PLGLRTEASR ESAVVIMNHI NLVEILMDVN QWSCVFSGIV SRALTLEVLS TGVAGNYNGA LQVMTAEFQV PSPLVPTREN YFVRYCKQHS DGSWAVVDVS
401: LDSLRPNLIS RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHTMYKP LVHSGLAFGA KRWVSTLERQ CERLASSMAS NIPASDLSVI TSPEGRKSML
501: KLAERMVMSF CTGVGASTAH AWTTMSSTGS DDVRVMTRKS MDDPGRPPGI VLSAATSFWI PVAPKRVFDF LRDENSRSEW DILSNGGMVQ EMAHIANGRE
601: PGNCVSLLRV NSGNSSQSNM LILQESCTDA SGSYVIYAPV DIVAMNVVLS GGDPDYVALL PSGFAILPDV VSSSSASGSC GSLLTVAFQI LVDSVPTAKL
701: SLGSVATVNS LIKCTVERIK AALACDVGGG AP
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENVRLRE EIDRISAIAA KYVGKPVGSS
201: FAPLEIHAPS RSLELEVGNF GNQTTGFVGD MYGTGDILRS VSIPSDTDKP MIVELAVAAM EELVRMAQAG DPLWVSTGNS MDLPNEEEDF RTFPRGIGPK
301: PLGLRTEASR ESAVVIMNHI NLVEILMDVN QWSCVFSGIV SRALTLEVLS TGVAGNYNGA LQVMTAEFQV PSPLVPTREN YFVRYCKQHS DGSWAVVDVS
401: LDSLRPNLIS RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHTMYKP LVHSGLAFGA KRWVSTLERQ CERLASSMAS NIPASDLSVI TSPEGRKSML
501: KLAERMVMSF CTGVGASTAH AWTTMSSTGS DDVRVMTRKS MDDPGRPPGI VLSAATSFWI PVAPKRVFDF LRDENSRSEW DILSNGGMVQ EMAHIANGRE
601: PGNCVSLLRV NSGNSSQSNM LILQESCTDA SGSYVIYAPV DIVAMNVVLS GGDPDYVALL PSGFAILPDV VSSSSASGSC GSLLTVAFQI LVDSVPTAKL
701: SLGSVATVNS LIKCTVERIK AALACDVGGG AP
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.