Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76399 | Canola | nucleus | 94.82 | 94.69 |
| CDX98703 | Canola | nucleus | 89.5 | 91.94 |
| CDY23096 | Canola | nucleus | 16.95 | 91.67 |
| CDX94054 | Canola | nucleus | 89.08 | 91.51 |
| CDX79091 | Canola | nucleus | 91.32 | 87.4 |
| CDY66622 | Canola | nucleus | 89.22 | 87.14 |
| AT4G21750.3 | Thale cress | nucleus | 91.74 | 85.96 |
| CDX90879 | Canola | nucleus | 85.85 | 85.61 |
| CDY21319 | Canola | nucleus | 85.43 | 85.2 |
| CDY16639 | Canola | nucleus | 86.27 | 84.04 |
| CDX94586 | Canola | nucleus | 86.13 | 84.02 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 70.03 | 75.76 |
| KRH27601 | Soybean | nucleus | 77.45 | 75.55 |
| KRH77881 | Soybean | nucleus | 76.75 | 74.97 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 60.36 | 73.55 |
| CDY06167 | Canola | nucleus | 70.17 | 69.58 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 70.73 | 69.56 |
| CDY10041 | Canola | nucleus | 69.89 | 66.8 |
| EES11464 | Sorghum | nucleus | 72.97 | 66.03 |
| EES13460 | Sorghum | mitochondrion, nucleus | 71.29 | 65.17 |
| GSMUA_Achr10P... | Banana | nucleus | 65.13 | 65.03 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 70.45 | 64.82 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 70.17 | 64.65 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 70.17 | 64.48 |
| Zm00001d049443_P005 | Maize | nucleus | 71.71 | 64.32 |
| Zm00001d002234_P003 | Maize | nucleus | 70.73 | 63.6 |
| Os08t0136100-01 | Rice | nucleus | 69.05 | 62.8 |
| GSMUA_Achr11P... | Banana | plastid | 69.19 | 62.61 |
| CDY71572 | Canola | nucleus | 34.45 | 62.6 |
| Zm00001d026351_P003 | Maize | nucleus | 73.25 | 61.97 |
| CDY49515 | Canola | plasma membrane | 69.75 | 61.41 |
| Zm00001d000247_P001 | Maize | plasma membrane | 61.34 | 60.92 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 67.23 | 60.15 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 66.95 | 60.05 |
| Zm00001d024701_P001 | Maize | nucleus | 66.95 | 59.97 |
| CDY46842 | Canola | nucleus | 69.61 | 59.88 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 66.67 | 59.8 |
| EES14500 | Sorghum | nucleus | 68.07 | 59.71 |
| CDY12213 | Canola | nucleus | 49.3 | 49.44 |
| CDY48272 | Canola | nucleus | 48.46 | 49.15 |
| CDY18903 | Canola | nucleus | 47.76 | 48.37 |
| CDX74762 | Canola | nucleus | 47.62 | 48.02 |
| CDX96744 | Canola | nucleus | 45.24 | 47.99 |
| CDY51143 | Canola | nucleus | 52.66 | 47.59 |
| CDY30748 | Canola | endoplasmic reticulum | 39.08 | 47.53 |
| CDX74347 | Canola | nucleus | 52.66 | 47.41 |
| CDY07201 | Canola | nucleus | 52.1 | 47.21 |
| CDX91894 | Canola | nucleus | 52.38 | 47.1 |
| CDX83884 | Canola | nucleus | 44.82 | 46.72 |
| CDY26204 | Canola | nucleus | 41.46 | 46.47 |
| CDY19129 | Canola | nucleus | 47.2 | 46.35 |
| CDX67855 | Canola | nucleus | 50.56 | 46.28 |
| CDY45684 | Canola | nucleus | 50.7 | 46.17 |
| CDY31916 | Canola | nucleus | 43.28 | 45.91 |
| CDY15339 | Canola | nucleus | 46.78 | 45.69 |
| CDX68229 | Canola | nucleus | 44.96 | 45.66 |
| CDY42097 | Canola | nucleus | 33.05 | 45.65 |
| CDY19185 | Canola | nucleus | 43.56 | 45.6 |
| CDY00515 | Canola | nucleus | 42.86 | 45.47 |
| CDY11109 | Canola | nucleus | 45.1 | 45.35 |
| CDY26205 | Canola | nucleus | 43.56 | 45.07 |
| CDX96471 | Canola | nucleus | 45.1 | 44.85 |
| CDX72984 | Canola | nucleus | 44.54 | 44.48 |
| CDX89415 | Canola | cytosol, mitochondrion | 10.92 | 43.82 |
| Os08t0187500-01 | Rice | nucleus | 19.33 | 42.33 |
| CDY43458 | Canola | nucleus | 43.84 | 38.55 |
| CDY03177 | Canola | nucleus | 43.98 | 38.01 |
| CDX76559 | Canola | nucleus | 38.66 | 37.6 |
| CDY08866 | Canola | nucleus | 38.38 | 37.23 |
| CDX77711 | Canola | nucleus | 42.86 | 37.18 |
| CDX79408 | Canola | nucleus | 40.34 | 36.92 |
| CDX67929 | Canola | nucleus | 40.48 | 36.91 |
| CDY33492 | Canola | nucleus | 41.04 | 36.81 |
| CDX85461 | Canola | cytosol | 35.57 | 36.03 |
| CDY69499 | Canola | cytosol | 15.13 | 35.53 |
| CDY62389 | Canola | cytosol | 24.23 | 35.38 |
| CDY42301 | Canola | nucleus | 34.17 | 35.36 |
| CDY67945 | Canola | nucleus | 33.75 | 34.98 |
| CDY39874 | Canola | plasma membrane | 9.38 | 34.9 |
| CDY43137 | Canola | nucleus | 33.19 | 34.4 |
| CDY02713 | Canola | nucleus | 35.57 | 34.37 |
| CDY53691 | Canola | nucleus | 34.17 | 34.37 |
| CDY21211 | Canola | nucleus | 33.33 | 34.29 |
| CDY49937 | Canola | nucleus | 33.33 | 34.29 |
| CDY44946 | Canola | nucleus | 30.95 | 34.1 |
| CDY16938 | Canola | nucleus | 30.81 | 33.33 |
| CDX89416 | Canola | nucleus | 28.99 | 31.9 |
| CDX94443 | Canola | cytosol | 26.89 | 30.57 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078GQD8 | UniProt:A0A078GQD8 | EnsemblPlants:CDY27417 | ProteinID:CDY27417 |
| ProteinID:CDY27417.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00037385001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF320 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom |
| UniParc:UPI0004EE4FA8 | SEG:seg | : | : | : | : |
Description
BnaC03g64570DBnaC03g64570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQD8]
Coordinates
chrLK032204:+:104777..111017
Molecular Weight (calculated)
79067.0 Da
IEP (calculated)
5.865
GRAVY (calculated)
-0.342
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHPNMFESH HHMFDMTKSS DNDLGLTGSL EDDFETKSGA EVTMENPLEE ELQDPNQRPN KKKRYHRHTQ RQIQELESFF KECPHPDDKQ RKELSRELNL
101: EPLQIKFWFQ NKRTQMKAQH ERHENSILKS DNDKLRAENN RYKDALSNAT CPNCGGPAAI GEMSFDEQHL RIENARLREE IDRISSIAAK YVGKPMLPHS
201: SPFSQLTTQT GFVGDMYGTS NIMRPVSIPR EADKPMIVEL AVAAMEELVR MAQTGDPLWV LSDSSGEILN EEEYFRTFPR GIGPKPIGLR SEASRESTVV
301: IMNHINLVEI LMDVNQWSSV FCGIVSRALT LDVLSTGVAG NYNGALQVLT AEFQVPSPLV PTRENYFVRY CKQHSDTTWA VVDVSLDSLR PSPITRSRRR
401: PSGCLIQELQ NGYSKVTWVE HTEVDDISVH TMYKPLVNTG LAFGAKRWVA TLDRQCERLA SSMASNIPTG DLSVITSSEG RMSMLKLAER MVMSFCSGVG
501: ASTAHAWTTL AATRSDDVRV MTRKSMDDPG RPPGIVLSAA TSFWIPVGPK RVFDFLRDEN SRSQWDILSN GGLVEEMAHI ANGRDPGNSV SLLRVNSSNS
601: GESNMLILQE SCTDASGSYV IYAPVDMMAM NVVLSGGDPD YVALLPSGFA ILPDGSIRGG NATSNCGSLL TVAFQILVDS VPTAKLSLGS VATVNSLIKC
701: TVQRIKDALA CDGA
101: EPLQIKFWFQ NKRTQMKAQH ERHENSILKS DNDKLRAENN RYKDALSNAT CPNCGGPAAI GEMSFDEQHL RIENARLREE IDRISSIAAK YVGKPMLPHS
201: SPFSQLTTQT GFVGDMYGTS NIMRPVSIPR EADKPMIVEL AVAAMEELVR MAQTGDPLWV LSDSSGEILN EEEYFRTFPR GIGPKPIGLR SEASRESTVV
301: IMNHINLVEI LMDVNQWSSV FCGIVSRALT LDVLSTGVAG NYNGALQVLT AEFQVPSPLV PTRENYFVRY CKQHSDTTWA VVDVSLDSLR PSPITRSRRR
401: PSGCLIQELQ NGYSKVTWVE HTEVDDISVH TMYKPLVNTG LAFGAKRWVA TLDRQCERLA SSMASNIPTG DLSVITSSEG RMSMLKLAER MVMSFCSGVG
501: ASTAHAWTTL AATRSDDVRV MTRKSMDDPG RPPGIVLSAA TSFWIPVGPK RVFDFLRDEN SRSQWDILSN GGLVEEMAHI ANGRDPGNSV SLLRVNSSNS
601: GESNMLILQE SCTDASGSYV IYAPVDMMAM NVVLSGGDPD YVALLPSGFA ILPDGSIRGG NATSNCGSLL TVAFQILVDS VPTAKLSLGS VATVNSLIKC
701: TVQRIKDALA CDGA
001: MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
101: LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN
201: SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301: FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG
401: IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS
501: PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601: AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE
701: GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
Arabidopsis Description
ATML1ATML1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ61]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.