Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13460 | Sorghum | mitochondrion, nucleus | 92.49 | 85.15 |
| Zm00001d049443_P005 | Maize | nucleus | 90.13 | 81.41 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 62.03 | 67.58 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 67.18 | 66.53 |
| Zm00001d002234_P003 | Maize | nucleus | 73.44 | 66.5 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 66.76 | 66.12 |
| PGSC0003DMT400061859 | Potato | nucleus | 62.17 | 64.88 |
| Solyc03g031760.2.1 | Tomato | cytosol | 56.05 | 64.07 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 67.18 | 63.8 |
| Zm00001d026351_P003 | Maize | nucleus | 74.27 | 63.27 |
| KRH56105 | Soybean | nucleus | 63.7 | 62.83 |
| PGSC0003DMT400029291 | Potato | nucleus | 60.64 | 62.55 |
| CDX90879 | Canola | nucleus | 61.89 | 62.15 |
| Solyc10g005330.2.1 | Tomato | nucleus | 61.47 | 62.08 |
| KRH27601 | Soybean | nucleus | 63.14 | 62.02 |
| CDY21319 | Canola | nucleus | 61.61 | 61.87 |
| KRH25398 | Soybean | plastid | 65.23 | 61.63 |
| CDX94054 | Canola | nucleus | 59.39 | 61.44 |
| CDX98703 | Canola | nucleus | 59.39 | 61.44 |
| KRH77881 | Soybean | nucleus | 62.45 | 61.42 |
| CDY27417 | Canola | nucleus | 60.92 | 61.34 |
| CDX76399 | Canola | nucleus | 60.78 | 61.12 |
| CDY16639 | Canola | nucleus | 62.31 | 61.12 |
| CDX94586 | Canola | nucleus | 62.03 | 60.93 |
| AT1G05230.5 | Thale cress | nucleus | 61.06 | 60.89 |
| AT4G04890.1 | Thale cress | nucleus | 62.87 | 60.83 |
| KRH22554 | Soybean | nucleus | 66.06 | 60.82 |
| Bra029527.1-P | Field mustard | nucleus | 63.0 | 60.81 |
| KRH26803 | Soybean | nucleus | 65.92 | 60.69 |
| AT4G21750.3 | Thale cress | nucleus | 64.12 | 60.5 |
| Bra000807.1-P | Field mustard | nucleus | 50.21 | 60.47 |
| GSMUA_Achr11P... | Banana | plastid | 66.2 | 60.33 |
| Bra015401.1-P | Field mustard | nucleus | 60.08 | 60.0 |
| CDY06167 | Canola | nucleus | 60.08 | 60.0 |
| Bra032478.1-P | Field mustard | nucleus | 59.94 | 59.94 |
| Bra038757.1-P | Field mustard | nucleus | 60.36 | 59.86 |
| Bra013556.1-P | Field mustard | nucleus | 57.3 | 59.71 |
| PGSC0003DMT400005277 | Potato | nucleus | 60.64 | 59.48 |
| CDY66622 | Canola | nucleus | 60.36 | 59.37 |
| GSMUA_Achr10P... | Banana | nucleus | 58.97 | 59.3 |
| Bra020872.1-P | Field mustard | nucleus | 61.34 | 58.96 |
| CDX79091 | Canola | nucleus | 61.06 | 58.85 |
| KRH13175 | Soybean | cytosol | 14.46 | 58.76 |
| Solyc02g080260.2.1 | Tomato | nucleus | 61.06 | 58.46 |
| CDY10041 | Canola | nucleus | 60.5 | 58.23 |
| CDY71572 | Canola | nucleus | 31.02 | 56.74 |
| Zm00001d024701_P001 | Maize | nucleus | 62.31 | 56.21 |
| CDY49515 | Canola | plasma membrane | 60.92 | 54.01 |
| CDY46842 | Canola | nucleus | 60.78 | 52.65 |
| KRG91238 | Soybean | nucleus | 51.46 | 50.62 |
| CDY23096 | Canola | nucleus | 9.18 | 50.0 |
| KRH35579 | Soybean | nucleus | 51.32 | 47.43 |
| Zm00001d018225_P001 | Maize | nucleus | 40.47 | 42.05 |
| Zm00001d040090_P002 | Maize | nucleus | 46.45 | 41.59 |
| Zm00001d052133_P001 | Maize | nucleus | 40.19 | 41.4 |
| Zm00001d037140_P004 | Maize | nucleus | 38.94 | 40.76 |
| Zm00001d044973_P001 | Maize | nucleus | 38.94 | 40.64 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 12.66 | 38.4 |
| Zm00001d026088_P002 | Maize | nucleus | 43.95 | 37.89 |
| Zm00001d021236_P004 | Maize | nucleus | 45.2 | 35.99 |
| Zm00001d040091_P001 | Maize | nucleus | 12.66 | 34.87 |
| KRH22254 | Soybean | cytosol | 24.48 | 32.9 |
| PGSC0003DMT400037397 | Potato | cytosol | 22.39 | 32.79 |
| Zm00001d030069_P004 | Maize | nucleus | 39.22 | 31.9 |
| Solyc10g006420.2.1 | Tomato | cytosol | 23.23 | 31.69 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 13.91 | 30.3 |
| Zm00001d019477_P001 | Maize | nucleus | 30.74 | 30.03 |
| Zm00001d004234_P001 | Maize | nucleus | 28.09 | 28.57 |
| Zm00001d043231_P001 | Maize | nucleus | 26.43 | 23.99 |
| Zm00001d004230_P030 | Maize | nucleus | 26.15 | 23.1 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | UniProt:A0A1X7YHD9 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008289 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | PFAM:PF00046 |
| PFAM:PF01852 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF513 | SMART:SM00234 | SMART:SM00389 |
| SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | UniParc:UPI000842B0D4 | EnsemblPlantsGene:Zm00001d000247 | EnsemblPlants:Zm00001d000247_P001 |
| EnsemblPlants:Zm00001d000247_T001 | SEG:seg | : | : | : | : |
Description
Homeobox-transcription factor 17Homeobox-leucine zipper protein MERISTEM L1
Coordinates
chrB73V4_ctg123:-:9585..17517
Molecular Weight (calculated)
76666.3 Da
IEP (calculated)
4.781
GRAVY (calculated)
-0.243
Length
719 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAMIGRNNG VAFGSSSALS LSQVIIPADF LDSHHLQQAF EQQLFEQIPA AAVDSSDNII HGRSDALVDE FESKSCSENP DGTASGDDGQ GDEDPNQRPN
101: KKKRYHRHTQ HQIEEMEAFF KECPHPDDKQ RKELSRELGL EPLQNQHERQ ENAQLRAEND KLRAENMRYK DALGTASCPS CGGPAALGEM SFDEHHLRLE
201: NARLRDEIDR ISGIAAKHVG KPMVSFPVLS SPLAARSPFD LAGAYGVQPP GGGGGLGAAD HLFGGAAGDL LRSVSAGQLS ADKSMIVELA VAAMDELLRM
301: ARVDAPLWNG GVAGVPQQLD EEEYGRTFPG GLGPRQYGLR PEASRDDAVV IMTRDSLVEI LMDANRFAAV FSSIVSRAST HEVLSTGVAG SYNGALQVMS
401: MEFQVPSPLV PTRESYFARY CKNNPDGTWA VVDVTWVEHV EVDDRSVHNL YRPLVNSGLG FGATRWVGTL DRQCERLASA MASNIPNGDL GVITSIEGRK
501: SMLKLAERMV ASFCGGVTAS AAHQWTTLSG SGAEDVRVMT RKSVDDPGRP PGIVLNAATS FWLPVPPKRV FDFLRDETSR SESANSNQSN MLILQESCTD
601: ASGSYVVYAP VDVVAMNVVL NGGDPDYVAL LPSGFAILPD GPPAPGMAPH HGGEGAAGGG LEELEAAGGS LLTVAFQILV DSVPTAKLSL GSVATVNSLI
701: ACTVERIKAA VCGAEGNPQ
101: KKKRYHRHTQ HQIEEMEAFF KECPHPDDKQ RKELSRELGL EPLQNQHERQ ENAQLRAEND KLRAENMRYK DALGTASCPS CGGPAALGEM SFDEHHLRLE
201: NARLRDEIDR ISGIAAKHVG KPMVSFPVLS SPLAARSPFD LAGAYGVQPP GGGGGLGAAD HLFGGAAGDL LRSVSAGQLS ADKSMIVELA VAAMDELLRM
301: ARVDAPLWNG GVAGVPQQLD EEEYGRTFPG GLGPRQYGLR PEASRDDAVV IMTRDSLVEI LMDANRFAAV FSSIVSRAST HEVLSTGVAG SYNGALQVMS
401: MEFQVPSPLV PTRESYFARY CKNNPDGTWA VVDVTWVEHV EVDDRSVHNL YRPLVNSGLG FGATRWVGTL DRQCERLASA MASNIPNGDL GVITSIEGRK
501: SMLKLAERMV ASFCGGVTAS AAHQWTTLSG SGAEDVRVMT RKSVDDPGRP PGIVLNAATS FWLPVPPKRV FDFLRDETSR SESANSNQSN MLILQESCTD
601: ASGSYVVYAP VDVVAMNVVL NGGDPDYVAL LPSGFAILPD GPPAPGMAPH HGGEGAAGGG LEELEAAGGS LLTVAFQILV DSVPTAKLSL GSVATVNSLI
701: ACTVERIKAA VCGAEGNPQ
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.