CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, extracellular

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22254	Soybean	cytosol	76.36	47.1
Os04t0627000-02	Rice	cytosol, peroxisome	36.06	20.31
Solyc10g006420.2.1	Tomato	cytosol	32.42	20.3
PGSC0003DMT400037397	Potato	cytosol	30.0	20.16
KRH13175	Soybean	cytosol	10.0	18.64
GSMUA_Achr3P23090_001	Banana	endoplasmic reticulum, plasma membrane	35.45	17.73
GSMUA_Achr8P07310_001	Banana	mitochondrion, nucleus	36.67	16.67
KRH56105	Soybean	nucleus	36.67	16.6
KRH27601	Soybean	nucleus	36.06	16.26
KRH25398	Soybean	plastid	36.97	16.03
KRH77881	Soybean	nucleus	35.45	16.01
GSMUA_Achr10P...	Banana	nucleus	33.33	15.38
KRH26803	Soybean	nucleus	36.36	15.36
KRH22554	Soybean	nucleus	36.36	15.36
KRG91238	Soybean	nucleus	33.64	15.18
EES13460	Sorghum	mitochondrion, nucleus	35.45	14.98
TraesCS2B01G497500.1	Wheat	nucleus	34.85	14.84
GSMUA_Achr11P...	Banana	plastid	35.45	14.83
EES11464	Sorghum	nucleus	35.45	14.83
TraesCS2D01G473700.1	Wheat	nucleus	34.85	14.82
TraesCS2A01G474000.1	Wheat	nucleus	34.85	14.8
TraesCS7A01G308400.1	Wheat	nucleus	34.85	14.45
TraesCS7D01G305200.1	Wheat	nucleus	34.85	14.45
Zm00001d049443_P005	Maize	nucleus	34.85	14.45
TraesCS7B01G208600.1	Wheat	nucleus	34.85	14.41
KRH35579	Soybean	nucleus	33.94	14.4
Zm00001d002234_P003	Maize	nucleus	34.55	14.36
Os08t0136100-01	Rice	nucleus	33.94	14.27
Zm00001d024701_P001	Maize	nucleus	34.24	14.18
Zm00001d026351_P003	Maize	nucleus	35.76	13.98
Zm00001d000247_P001	Maize	plasma membrane	30.3	13.91
EES14500	Sorghum	nucleus	34.24	13.88
KRH09884	Soybean	plastid	30.61	13.45
KRH41898	Soybean	nucleus	29.09	13.31
KRH23432	Soybean	plastid	30.3	13.12
KRH44348	Soybean	nucleus	29.7	13.1
KRH47277	Soybean	nucleus	29.7	13.05
KRH60596	Soybean	nucleus	28.18	13.04
KRH36826	Soybean	nucleus	27.58	12.76
KRH09477	Soybean	nucleus	27.27	12.53
KRH38939	Soybean	nucleus	27.27	12.47
KRH38560	Soybean	nucleus	29.09	12.37
KRH35356	Soybean	nucleus	28.48	12.29
KRG91457	Soybean	nucleus	28.48	12.1
KRH00641	Soybean	nucleus	30.0	12.04
KRH09109	Soybean	plastid	28.18	12.0
KRH48236	Soybean	nucleus	30.0	11.94
KRH40539	Soybean	nucleus	29.39	11.83
KRH11810	Soybean	nucleus	25.45	11.78
KRH65144	Soybean	nucleus	29.39	11.6
KRH36827	Soybean	nucleus	24.55	11.42
KRH74360	Soybean	nucleus	26.97	11.28
KRH39579	Soybean	nucleus	27.27	11.25
KRH42428	Soybean	nucleus	25.45	11.1
KRH42429	Soybean	cytosol	24.24	10.96
VIT_19s0177g00240.t01	Wine grape	cytosol, mitochondrion	5.45	7.59
Os08t0187500-01	Rice	nucleus	3.03	3.07
HORVU3Hr1G022160.1	Barley	cytosol	0.0	0.0

Protein Annotations

MapMan:15.5.3.3	EMBL:ACUP02007765	EnsemblPlantsGene:GLYMA_12G212800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0008289	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002913	UniProt:K7LW77	EnsemblPlants:KRH27078
ProteinID:KRH27078	ProteinID:KRH27078.1	PFAM:PF01852	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF122
SMART:SM00234	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom	TMHMM:TMhelix	UniParc:UPI000296B385	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:37179924..37185798

Molecular Weight (calculated)

37464.9 Da

IEP (calculated)

5.950

GRAVY (calculated)

-0.015

Length

330 amino acids

Sequence
(BLAST)

001: MQRASDLIFG FSIFAEPMKT EIIEHARLAM DELVKLGTAG HPLWQPQPKD RFDILNQIEY LRQFGEVDTA LREIVKLIEV GEPQNLPSFD TYQTEQPASK
101: ETPTVALQTE ASRDMAFINM SPISIVELLM DVNEWSSAFY NIVSKATLVG TLLGGERGYD DKLHVMSAEI HLPTTTVPTR ECYFGRFSKQ LSHNVWGVVD
201: ISLEKFIPSP TSNFLKRPSG CLISGMPNGH SKVAWVEHVE ADHSHLDNYF KPLVTSTLAF GASRWLNSLN RYGEWLQTLK ATTFVADEGG TYVFCTLYFN
301: LFKVFHYMTL HLCFFLISSF VFSFVYVKSI

Best Arabidopsis Sequence Match ( AT4G04890.1 )
(BLAST)

001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA

Arabidopsis Description

PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.