Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G022170.1 | Barley | cytosol | 71.82 | 66.39 |
| HORVU3Hr1G022070.1 | Barley | nucleus | 53.64 | 31.22 |
| HORVU1Hr1G005430.1 | Barley | nucleus | 52.73 | 26.61 |
| HORVU7Hr1G103010.2 | Barley | cytosol, mitochondrion, nucleus | 14.55 | 12.4 |
| HORVU0Hr1G006920.1 | Barley | nucleus | 9.09 | 10.1 |
| HORVU7Hr1G035250.1 | Barley | nucleus | 10.91 | 8.05 |
| HORVU7Hr1G103020.1 | Barley | nucleus | 14.55 | 7.96 |
| HORVU6Hr1G065300.3 | Barley | nucleus | 22.73 | 3.12 |
| HORVU3Hr1G108430.1 | Barley | cytosol | 9.09 | 3.0 |
| HORVU5Hr1G080700.2 | Barley | nucleus | 22.73 | 2.93 |
| HORVU2Hr1G106970.2 | Barley | nucleus, plastid | 20.0 | 2.83 |
| HORVU7Hr1G073450.1 | Barley | mitochondrion, nucleus | 20.0 | 2.76 |
| HORVU7Hr1G073440.1 | Barley | nucleus | 20.0 | 2.76 |
| HORVU1Hr1G050620.2 | Barley | nucleus | 20.0 | 2.49 |
| HORVU6Hr1G079410.6 | Barley | nucleus | 16.36 | 2.48 |
| HORVU3Hr1G073290.1 | Barley | nucleus | 14.55 | 2.44 |
| HORVU5Hr1G083940.3 | Barley | nucleus | 16.36 | 2.32 |
| HORVU7Hr1G035230.2 | Barley | nucleus | 14.55 | 2.15 |
| HORVU2Hr1G095210.1 | Barley | nucleus | 14.55 | 2.05 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 3.64 | 1.69 |
| HORVU3Hr1G077690.1 | Barley | nucleus | 9.09 | 1.49 |
| HORVU7Hr1G036950.2 | Barley | cytosol | 0.0 | 0.0 |
| HORVU4Hr1G062510.2 | Barley | cytosol | 0.0 | 0.0 |
| KRH22254 | Soybean | cytosol | 0.0 | 0.0 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 0.0 | 0.0 |
| PGSC0003DMT400037397 | Potato | cytosol | 0.0 | 0.0 |
| Solyc10g006420.2.1 | Tomato | cytosol | 0.0 | 0.0 |
| HORVU0Hr1G013510.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G022160.1 | EnsemblPlantsGene:HORVU3Hr1G022160 | UniParc:UPI000B4718BA | UniProt:A0A287KED9 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr3H:+:77468108..77469815
Molecular Weight (calculated)
12548.5 Da
IEP (calculated)
4.285
GRAVY (calculated)
-0.865
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGWPQYDN DVQNMLDMFI TSEHDHLLQH QHGDEMHGLL GATTNMGNTD EGNALAADKG NNNDGETRSE QRMVKMHAKY HRLFGEQIEQ LEAYNNILNQ
101: CFLPIEEDVC
101: CFLPIEEDVC
001: MIELENSGIE DEEEVSESPK LVFKFAFQTE TFERLSREGY RSLSDDCGVE SESSFLSSDS SPVIFTAAAR KYETPSAKNL TFVLENPKAA TFRVEDCLKE
101: KQEKTEDLGY SVFHGEDKVK TEDYSVSSFK KKKIRFLTEE DFLESDSDFV DSSQTFTSND EDGFLSDSDF AETSLKKGQN RKSDNSGSGS DSEEEEEEDT
201: NGFESLWEHQ DLIEQLKMEM KKVKAIGGLT TILEEEEEDD DCPKIMEDLK PWRIEEEKKF KHVDTIGEVH KFHRSYRERM RKLDILSFQK SYALGLLQSK
301: SPQQATSTLG SNPSQTSFSS VFSVNIRLWK AKKSEIEPMV QFVKEIQGEL ENVYVGQMCL SWEILHWQYE KAIELLESDV YGSRRYNEVA GEFQQFQVLL
401: QRFLENEPFE EPRVQHYIKR RCVLRNLLQI PVIREDGNKD KKNGRRRDYE ENNDGVIKSD QLVEIMEETI RLFWRFVRCD KLTSSIHDQK SRTKSQIEPD
501: HEEDSEDLEM FAEVKSQLQN VSVFFLKIQS LKLYGCATDV IGWLQKEKRL RDVLKSERCI IRRFQKHKEE DSTEDQVLHF FSQVDMKLVT RVLNMSKLTR
601: DHLVWCHNKL TKINFVNRRL HLDPSFCLFP C
101: KQEKTEDLGY SVFHGEDKVK TEDYSVSSFK KKKIRFLTEE DFLESDSDFV DSSQTFTSND EDGFLSDSDF AETSLKKGQN RKSDNSGSGS DSEEEEEEDT
201: NGFESLWEHQ DLIEQLKMEM KKVKAIGGLT TILEEEEEDD DCPKIMEDLK PWRIEEEKKF KHVDTIGEVH KFHRSYRERM RKLDILSFQK SYALGLLQSK
301: SPQQATSTLG SNPSQTSFSS VFSVNIRLWK AKKSEIEPMV QFVKEIQGEL ENVYVGQMCL SWEILHWQYE KAIELLESDV YGSRRYNEVA GEFQQFQVLL
401: QRFLENEPFE EPRVQHYIKR RCVLRNLLQI PVIREDGNKD KKNGRRRDYE ENNDGVIKSD QLVEIMEETI RLFWRFVRCD KLTSSIHDQK SRTKSQIEPD
501: HEEDSEDLEM FAEVKSQLQN VSVFFLKIQS LKLYGCATDV IGWLQKEKRL RDVLKSERCI IRRFQKHKEE DSTEDQVLHF FSQVDMKLVT RVLNMSKLTR
601: DHLVWCHNKL TKINFVNRRL HLDPSFCLFP C
Arabidopsis Description
Protein of unknown function (DUF1666) [Source:TAIR;Acc:AT5G39785]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.