Factsheet for HORVU3Hr1G073290.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G006920.1	Barley	nucleus	12.8	84.85
TraesCS3A01G305300.1	Wheat	nucleus	89.94	77.53
TraesCS3B01G331200.1	Wheat	nucleus	89.18	77.48
TraesCS3D01G296500.3	Wheat	nucleus	83.38	68.89
Os01t0760800-00	Rice	nucleus	14.02	68.66
VIT_09s0002g04340.t01	Wine grape	nucleus	57.16	50.0
GSMUA_Achr3P15400_001	Banana	nucleus	56.1	49.13
OQU87592	Sorghum	nucleus	52.44	48.38
KRH09884	Soybean	plastid	54.27	47.4
KRH23432	Soybean	plastid	55.03	47.38
KRH47277	Soybean	nucleus	54.12	47.27
KRH44348	Soybean	nucleus	52.9	46.39
GSMUA_Achr8P27340_001	Banana	nucleus	52.59	46.06
Bra003535.1-P	Field mustard	nucleus	51.52	45.07
HORVU7Hr1G103010.2	Barley	cytosol, mitochondrion, nucleus	8.69	44.19
PGSC0003DMT400006770	Potato	nucleus	51.52	43.78
Solyc03g120620.2.1	Tomato	nucleus	51.37	43.48
CDX79408	Canola	nucleus	51.52	43.33
CDX67929	Canola	nucleus	51.68	43.3
AT1G79840.2	Thale cress	nucleus, plastid	50.76	42.91
HORVU7Hr1G035250.1	Barley	nucleus	8.08	35.57
HORVU7Hr1G103020.1	Barley	nucleus	10.21	33.33
HORVU7Hr1G073440.1	Barley	nucleus	37.8	31.16
HORVU7Hr1G036950.2	Barley	cytosol	8.69	31.15
HORVU2Hr1G106970.2	Barley	nucleus, plastid	36.43	30.76
HORVU7Hr1G073450.1	Barley	mitochondrion, nucleus	36.74	30.28
HORVU6Hr1G079410.6	Barley	nucleus	32.62	29.52
HORVU6Hr1G065300.3	Barley	nucleus	35.67	29.25
HORVU1Hr1G005430.1	Barley	nucleus	9.6	28.9
HORVU5Hr1G080700.2	Barley	nucleus	35.98	27.67
HORVU4Hr1G062510.2	Barley	cytosol	11.59	27.44
HORVU7Hr1G035230.2	Barley	nucleus	30.79	27.15
HORVU2Hr1G095210.1	Barley	nucleus	32.01	26.92
HORVU3Hr1G022070.1	Barley	nucleus	7.62	26.45
HORVU3Hr1G108430.1	Barley	cytosol	13.26	26.13
HORVU1Hr1G050620.2	Barley	nucleus	35.06	25.99
HORVU3Hr1G077690.1	Barley	nucleus	24.09	23.55
HORVU5Hr1G083940.3	Barley	nucleus	25.76	21.78
HORVU3Hr1G022160.1	Barley	cytosol	2.44	14.55
HORVU3Hr1G022170.1	Barley	cytosol	2.13	11.76
HORVU0Hr1G013510.1	Barley	cytosol	0.61	2.88

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	Gene3D:3.30.530.20	UniProt:A0A287LMQ6	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008289	GO:GO:0009058	GO:GO:0009653	GO:GO:0009957	GO:GO:0009987	GO:GO:0010062
GO:GO:0030154	GO:GO:0043565	EnsemblPlantsGene:HORVU3Hr1G073290	EnsemblPlants:HORVU3Hr1G073290.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	PFAM:PF00046	PFAM:PF01852
ScanProsite:PS00027	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF272	SMART:SM00234
SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	SignalP:SignalP-noTM
UniParc:UPI000B46962D	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:552910072..552913299

Molecular Weight (calculated)

71202.7 Da

IEP (calculated)

7.089

GRAVY (calculated)

-0.489

Length

656 amino acids

Sequence
(BLAST)

001: MGSSRPRTKD FFAVPTLSLS LAGAFARNAP AATSGDEVEE DDEGSGGIRS GPLGEEVEIS SENKGPAGSQ SGDGSGEEEE GHDDGGKRKK RSRKSYHRHT
101: AEQVRVMEAV FKESPHPDEK QRQQLSKQLG LSPRQVKFWF QNRRTQIKAV QERHENSLLK SELENLQKEN RAMRQLTKRP SSCPSCGAGA ASSDGFDAAA
201: ASQEQQLQLE NAKLRAEVEK LRGALGTAAA DGATSPASSP FSAATAQMSS NRSPLEVYGG GFAGRDMQSV LELAGRALEE LKMMASSGEP LWVRSVETGR
301: DILNYDEYVR LFRRDDGPAD RQAGWSVEAS RETGVVYLDA TKLVHAFMDV NEWKELFPSM VAKASTLDVI RTGDDDDGHD GVVQLMFAEV QMLTPMVPTR
401: EFYFARYCRK LAAEKWAIVD VSFDKAEADV GTSPLVRCSK DPSGCIIEEQ ANGHSRVTWV EHTRLRECAA PSMYRAVTAG GLAFGARRWV ATLQLQCERM
501: VFWVATNVPT RDSSGVSTLA GRRSVLKLAH RMTSSLCRVI GGSRGLAWSR APRAGAGDVR LTSRTNAGDP GEPQGLIACA VLSAWLPVST TALLDFLRDE
601: SRRPEWDVTL AGRAVHCRVN LTKGKDRGNC VTAYAPASAG GHGGEWIVQD GCTSPC

Best Arabidopsis Sequence Match ( AT1G79840.1 )
(BLAST)

001: MSMAVDMSSK QPTKDFFSSP ALSLSLAGIF RNASSGSTNP EEDFLGRRVV DDEDRTVEMS SENSGPTRSR SEEDLEGEDH DDEEEEEEDG AAGNKGTNKR
101: KRKKYHRHTT DQIRHMEALF KETPHPDEKQ RQQLSKQLGL APRQVKFWFQ NRRTQIKAIQ ERHENSLLKA ELEKLREENK AMRESFSKAN SSCPNCGGGP
201: DDLHLENSKL KAELDKLRAA LGRTPYPLQA SCSDDQEHRL GSLDFYTGVF ALEKSRIAEI SNRATLELQK MATSGEPMWL RSVETGREIL NYDEYLKEFP
301: QAQASSFPGR KTIEASRDAG IVFMDAHKLA QSFMDVGQWK ETFACLISKA ATVDVIRQGE GPSRIDGAIQ LMFGEMQLLT PVVPTREVYF VRSCRQLSPE
401: KWAIVDVSVS VEDSNTEKEA SLLKCRKLPS GCIIEDTSNG HSKVTWVEHL DVSASTVQPL FRSLVNTGLA FGARHWVATL QLHCERLVFF MATNVPTKDS
501: LGVTTLAGRK SVLKMAQRMT QSFYRAIAAS SYHQWTKITT KTGQDMRVSS RKNLHDPGEP TGVIVCASSS LWLPVSPALL FDFFRDEARR HEWDALSNGA
601: HVQSIANLSK GQDRGNSVAI QTVKSREKSI WVLQDSSTNS YESVVVYAPV DINTTQLVLA GHDPSNIQIL PSGFSIIPDG VESRPLVITS TQDDRNSQGG
701: SLLTLALQTL INPSPAAKLN MESVESVTNL VSVTLHNIKR SLQIEDC

Arabidopsis Description

GL2HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HQC0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.