Factsheet for HORVU2Hr1G106970.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G473700.1	Wheat	nucleus	98.84	98.97
TraesCS2B01G497500.1	Wheat	nucleus	98.71	98.97
TraesCS2A01G474000.1	Wheat	nucleus	98.84	98.84
Os04t0627000-02	Rice	cytosol, peroxisome	62.29	82.59
EES11464	Sorghum	nucleus	83.27	82.0
Zm00001d002234_P003	Maize	nucleus	81.08	79.35
GSMUA_Achr3P23090_001	Banana	endoplasmic reticulum, plasma membrane	65.89	77.58
GSMUA_Achr8P07310_001	Banana	mitochondrion, nucleus	71.56	76.58
Zm00001d026351_P003	Maize	nucleus	82.24	75.71
GSMUA_Achr10P...	Banana	nucleus	66.28	72.03
GSMUA_Achr11P...	Banana	plastid	71.81	70.72
HORVU7Hr1G073440.1	Barley	nucleus	69.5	67.84
HORVU7Hr1G073450.1	Barley	mitochondrion, nucleus	66.92	65.33
HORVU7Hr1G103010.2	Barley	cytosol, mitochondrion, nucleus	9.14	55.04
HORVU0Hr1G013510.1	Barley	cytosol	9.4	52.52
HORVU6Hr1G065300.3	Barley	nucleus	49.03	47.62
HORVU7Hr1G103020.1	Barley	nucleus	11.58	44.78
HORVU6Hr1G079410.6	Barley	nucleus	41.7	44.69
HORVU0Hr1G006920.1	Barley	nucleus	5.53	43.43
HORVU5Hr1G080700.2	Barley	nucleus	47.23	43.02
HORVU2Hr1G095210.1	Barley	nucleus	41.83	41.67
HORVU7Hr1G035250.1	Barley	nucleus	7.59	39.6
HORVU1Hr1G050620.2	Barley	nucleus	42.34	37.18
HORVU3Hr1G073290.1	Barley	nucleus	30.76	36.43
HORVU7Hr1G035230.2	Barley	nucleus	33.85	35.35
HORVU4Hr1G062510.2	Barley	cytosol	11.97	33.57
HORVU3Hr1G077690.1	Barley	nucleus	27.93	32.34
HORVU7Hr1G036950.2	Barley	cytosol	7.46	31.69
HORVU3Hr1G022070.1	Barley	nucleus	7.46	30.69
HORVU3Hr1G108430.1	Barley	cytosol	12.48	29.13
HORVU5Hr1G083940.3	Barley	nucleus	28.96	28.99
HORVU1Hr1G005430.1	Barley	nucleus	7.98	28.44
HORVU3Hr1G022170.1	Barley	cytosol	3.47	22.69
HORVU3Hr1G022160.1	Barley	cytosol	2.83	20.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:HORVU2Hr1G106970	EnsemblPlants:HORVU2Hr1G106970.2	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:IPR002913	UniProt:M0Y5B4	PFAM:PF00046	PFAM:PF01852	ScanProsite:PS00027
PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF349	SMART:SM00234	SMART:SM00389
SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom	UniParc:UPI000296B01B	SEG:seg	:

Description

No Description!

Coordinates

chrchr2H:-:710953055..710959846

Molecular Weight (calculated)

83633.3 Da

IEP (calculated)

5.736

GRAVY (calculated)

-0.229

Length

777 amino acids

Sequence
(BLAST)

001: MMIPARHMPS SMIGRSSGGA PYGSSSALSL GQPNLLDGSN QHLLQHHLLE QIPVRAAESG DNNIGSGGGG VGMIRGRESM DPLGDEFESR SGSENVDGDA
101: VDNAEQDQDP NQRPRKKRYH RHTQHQIQEM EAFFKECPHP DDKQRKELSR ELGLEPLQVK FWFQNKRTQM KNQHERHENS QLRADNDKLR AENMRYKEAL
201: SSASCPNCGG PAALGEMSFD EHHLRVENAR LRDEIDRISA IAAKYVGKPM VPFPVLSSPL AAAPGASAYD VFAGAASVLQ APPDDKQQGV VVELAVAAME
301: ELLRMARLDD PLWATTVDQT LALDEEEYAR MFIDPRGGLG PKQYGLVSEA SRDATVVIMT PASLVEILMD VNQYAAVFSS IVSRAATLEV LSTGVAGCYD
401: GALQVMSVEF QVPSPLVPTR ESYFVRYCKR NADGAWAVVD VSLDGLQGVK CRRRPSGCLI QEAPNGYSKV TWVEHVEVDD RSVHNIYKPL VGSGLAFGAR
501: RWVGVLGRQC ERLASAMASN IPTSDIGVIT SSEGRKSMLK LAERMVASFC GGVTASVAHQ WTTLSGSGAE DVRVMTRKSV DDPGRPPGIV LNAATSFWLP
601: VPPKRVFDFL RDETSRSEWD ILSNGGIVQE MAHIANGRDH GNCVSLLRVN STNSNQSNML ILQESCTDAS GSYVIYAPVD VVAMNVVLNG GDPDYVALLP
701: SGFAILPDGP AGTMHAAAGA TGTGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIACTV ERIKTAVISN GGASPPQ

Best Arabidopsis Sequence Match ( AT4G04890.1 )
(BLAST)

001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA

Arabidopsis Description

PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.