Factsheet for HORVU2Hr1G095210.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G419200.1	Wheat	nucleus	85.77	85.22
TraesCS2D01G398600.1	Wheat	nucleus	85.64	85.2
TraesCS2A01G401200.3	Wheat	nucleus	85.64	83.5
Os04t0569100-01	Rice	nucleus	58.21	56.33
HORVU6Hr1G065300.3	Barley	nucleus	55.77	54.38
KXG26935	Sorghum	nucleus	55.51	53.99
GSMUA_Achr1P18760_001	Banana	nucleus	49.87	51.45
Zm00001d026088_P002	Maize	nucleus	54.62	51.08
CDY18903	Canola	nucleus	46.03	50.92
CDX74762	Canola	nucleus	45.9	50.56
VIT_15s0048g02000.t01	Wine grape	nucleus	51.92	49.94
KRH40539	Soybean	nucleus	51.92	49.39
KRH00641	Soybean	nucleus	51.79	49.15
HORVU0Hr1G013510.1	Barley	cytosol	8.72	48.92
KRH48236	Soybean	nucleus	51.54	48.49
Bra004934.1-P	Field mustard	nucleus	48.85	48.47
KRH65144	Soybean	nucleus	51.79	48.33
CDX67855	Canola	nucleus	48.21	48.21
PGSC0003DMT400071377	Potato	nucleus	50.64	48.11
Solyc01g091630.2.1	Tomato	nucleus	50.51	47.99
Bra003439.1-P	Field mustard	nucleus	48.21	47.9
CDY45684	Canola	nucleus	47.95	47.7
Bra037355.1-P	Field mustard	nucleus	48.08	47.47
CDY51143	Canola	nucleus	47.95	47.34
HORVU7Hr1G103010.2	Barley	cytosol, mitochondrion, nucleus	7.82	47.29
CDY07201	Canola	nucleus	47.69	47.21
CDX74347	Canola	nucleus	47.69	46.91
GSMUA_Achr3P12410_001	Banana	nucleus	44.62	46.9
CDX91894	Canola	nucleus	47.56	46.73
PGSC0003DMT400019986	Potato	nucleus	48.46	46.72
AT4G00730.1	Thale cress	nucleus	47.56	46.26
AT3G61150.1	Thale cress	nucleus	47.82	46.16
HORVU5Hr1G080700.2	Barley	nucleus	46.92	42.91
HORVU7Hr1G073440.1	Barley	nucleus	43.59	42.71
HORVU2Hr1G106970.2	Barley	nucleus, plastid	41.67	41.83
HORVU7Hr1G103020.1	Barley	nucleus	10.77	41.79
HORVU7Hr1G073450.1	Barley	mitochondrion, nucleus	42.05	41.21
HORVU6Hr1G079410.6	Barley	nucleus	37.31	40.14
HORVU4Hr1G062510.2	Barley	cytosol	14.1	39.71
HORVU7Hr1G035250.1	Barley	nucleus	7.44	38.93
HORVU0Hr1G006920.1	Barley	nucleus	4.74	37.37
HORVU7Hr1G036950.2	Barley	cytosol	8.59	36.61
HORVU3Hr1G073290.1	Barley	nucleus	26.92	32.01
HORVU3Hr1G108430.1	Barley	cytosol	13.33	31.23
HORVU1Hr1G050620.2	Barley	nucleus	34.1	30.06
HORVU5Hr1G083940.3	Barley	nucleus	29.23	29.38
HORVU3Hr1G077690.1	Barley	nucleus	25.26	29.36
HORVU7Hr1G035230.2	Barley	nucleus	27.56	28.9
HORVU1Hr1G005430.1	Barley	nucleus	7.44	26.61
HORVU3Hr1G022070.1	Barley	nucleus	5.38	22.22
HORVU3Hr1G022160.1	Barley	cytosol	2.05	14.55
HORVU3Hr1G022170.1	Barley	cytosol	2.18	14.29

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	UniProt:A0A287J0J8	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0008289	EnsemblPlantsGene:HORVU2Hr1G095210	EnsemblPlants:HORVU2Hr1G095210.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:IPR002913	PFAM:PF00046	PFAM:PF01852	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326
PANTHER:PTHR24326:SF487	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom
UniParc:UPI000B47667A	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:668997933..669004500

Molecular Weight (calculated)

84001.7 Da

IEP (calculated)

5.141

GRAVY (calculated)

-0.112

Length

780 amino acids

Sequence
(BLAST)

001: MPTEKGMAAF WGFLQDDGGG PAPDMNEFPY YSAADLASWP PSSLAPAGAV VKAESGSPSM IDHLHAVSGA DFGGGGGEDD EVAPELGQQR LERKRPPHGR
101: HTPQQIQELQ ALFNQCPHPD EKQRAAVGKR VCLRPSQVKF WFQNRRTQIK RESLQHENKQ LREENGKLRA ENLSLREAMT RPVCGCCGGP VPAMLEDSPS
201: LEEERLRVQN ATLRIELSRS CALASAFLGR SVSSVAAPPT PGSPVDRIGS VPATTVAHST VTEFTGSPSS QTVEMAVTTM AKAGIDESVF LELATSAMDE
301: LVKMAQMDEP LWIPNALLPG SLVKATLNHE EYLKTFSPSI GVKPPGFVSE ASRESGIVAS DGSFELVETL LDERQWSSFF SCIIAESSTI EEISTGAAGS
401: RDGALLLMQA KLQVLSPLVP IREVTFLRFC KQLGECLWAV VDVSIDGLVM EQGLAVASTA ANMKCRRLPS GCVVQEIPNG FCKVTWVEHT VYDESSIHQL
501: YRPLLRSGLA LGAGRWLSTL QRQYECLDVL MPKQDASDAM LEGSRSLLRL AERMMENFCA GVGASSAEWS KLDDFTGSIG EDVRIMARRS VDEPGVPPGG
601: VVVCAATSVW MLVTPKRLFN FLCNEGTRAE WDILSRGGSM QEVTKIYKGQ LNGNAVSLLK GTAPNTHQDS SILVLQETCM DASGSMVVYT PVDIPAMRRV
701: MGGEGDPASI MLLPSGFVIL PSVPGDDGGH KACGSLLTVA FQILGSRQPT GKLTVESVQT VGSLISCTIN RIKTALRCDA

Best Arabidopsis Sequence Match ( AT1G05230.8 )
(BLAST)

001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT
701: VNNLIACTVE RIKASMSCET A

Arabidopsis Description

HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.