Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18903 | Canola | nucleus | 96.89 | 97.31 |
| Bra004934.1-P | Field mustard | nucleus | 99.15 | 89.31 |
| Os09t0526300-00 | Rice | nucleus | 14.69 | 79.39 |
| CDX67855 | Canola | nucleus | 72.18 | 65.51 |
| CDY45684 | Canola | nucleus | 72.03 | 65.05 |
| VIT_15s0048g02000.t01 | Wine grape | nucleus | 71.33 | 62.27 |
| KRH40539 | Soybean | nucleus | 71.05 | 61.34 |
| Solyc01g091630.2.1 | Tomato | nucleus | 70.76 | 61.02 |
| KRH00641 | Soybean | nucleus | 70.76 | 60.95 |
| PGSC0003DMT400071377 | Potato | nucleus | 70.62 | 60.9 |
| CDY51143 | Canola | nucleus | 67.09 | 60.13 |
| GSMUA_Achr1P18760_001 | Banana | nucleus | 63.98 | 59.92 |
| CDY07201 | Canola | nucleus | 66.53 | 59.77 |
| KRH48236 | Soybean | nucleus | 69.92 | 59.71 |
| CDX74347 | Canola | nucleus | 66.81 | 59.65 |
| KRH65144 | Soybean | nucleus | 70.2 | 59.45 |
| CDX91894 | Canola | nucleus | 66.53 | 59.32 |
| PGSC0003DMT400019986 | Potato | nucleus | 66.38 | 58.1 |
| HORVU0Hr1G013510.1 | Barley | cytosol | 11.3 | 57.55 |
| HORVU6Hr1G065300.3 | Barley | nucleus | 64.41 | 57.0 |
| TraesCS6A01G255800.1 | Wheat | nucleus | 64.55 | 56.84 |
| TraesCS6D01G237000.1 | Wheat | nucleus | 64.55 | 56.84 |
| TraesCS6B01G269700.1 | Wheat | nucleus | 64.41 | 56.72 |
| Os02t0674800-01 | Rice | nucleus | 64.27 | 56.59 |
| Zm00001d040090_P002 | Maize | nucleus | 63.84 | 56.29 |
| EES02604 | Sorghum | nucleus | 63.98 | 55.58 |
| GSMUA_Achr3P12410_001 | Banana | nucleus | 57.06 | 54.45 |
| Zm00001d040091_P001 | Maize | nucleus | 19.49 | 52.87 |
| Os04t0569100-01 | Rice | nucleus | 59.6 | 52.36 |
| HORVU5Hr1G080700.2 | Barley | nucleus | 60.88 | 50.53 |
| TraesCS5B01G315100.2 | Wheat | nucleus | 60.59 | 50.47 |
| CDY31916 | Canola | nucleus | 47.88 | 50.37 |
| TraesCS5D01G320600.1 | Wheat | nucleus | 60.31 | 50.29 |
| TraesCS5A01G314400.2 | Wheat | nucleus | 60.17 | 50.18 |
| EER99222 | Sorghum | nucleus | 61.72 | 50.11 |
| CDY00515 | Canola | nucleus | 47.46 | 49.93 |
| KXG26935 | Sorghum | nucleus | 56.07 | 49.5 |
| CDX98703 | Canola | nucleus | 48.31 | 49.21 |
| CDX94054 | Canola | nucleus | 48.16 | 49.06 |
| CDX90879 | Canola | nucleus | 49.01 | 48.46 |
| CDY21319 | Canola | nucleus | 48.87 | 48.32 |
| CDX76399 | Canola | nucleus | 48.45 | 47.97 |
| CDY16639 | Canola | nucleus | 49.44 | 47.75 |
| Zm00001d021236_P004 | Maize | nucleus | 60.88 | 47.73 |
| CDX94586 | Canola | nucleus | 49.29 | 47.68 |
| CDY27417 | Canola | nucleus | 48.02 | 47.62 |
| CDY06167 | Canola | nucleus | 47.46 | 46.67 |
| CDY23096 | Canola | nucleus | 8.62 | 46.21 |
| TraesCS2D01G398600.1 | Wheat | nucleus | 51.13 | 46.17 |
| CDY66622 | Canola | nucleus | 47.6 | 46.1 |
| HORVU2Hr1G095210.1 | Barley | nucleus | 50.56 | 45.9 |
| TraesCS2B01G419200.1 | Wheat | nucleus | 50.71 | 45.73 |
| CDY10041 | Canola | nucleus | 47.88 | 45.38 |
| Zm00001d026088_P002 | Maize | nucleus | 53.39 | 45.32 |
| CDX79091 | Canola | nucleus | 47.6 | 45.17 |
| TraesCS2A01G401200.3 | Wheat | nucleus | 50.56 | 44.75 |
| CDX89415 | Canola | cytosol, mitochondrion | 11.16 | 44.38 |
| CDX96744 | Canola | nucleus | 41.24 | 43.39 |
| CDX68229 | Canola | nucleus | 41.95 | 42.25 |
| CDX83884 | Canola | nucleus | 40.68 | 42.04 |
| CDY49515 | Canola | plasma membrane | 48.02 | 41.92 |
| CDY11109 | Canola | nucleus | 41.81 | 41.69 |
| CDX96471 | Canola | nucleus | 42.23 | 41.64 |
| CDX72984 | Canola | nucleus | 41.95 | 41.54 |
| CDY42097 | Canola | nucleus | 30.08 | 41.2 |
| CDY46842 | Canola | nucleus | 48.02 | 40.96 |
| CDY19185 | Canola | nucleus | 39.41 | 40.91 |
| CDY26204 | Canola | nucleus | 36.72 | 40.82 |
| CDY26205 | Canola | nucleus | 39.55 | 40.58 |
| CDY71572 | Canola | nucleus | 22.03 | 39.69 |
| CDY48272 | Canola | nucleus | 39.41 | 39.63 |
| CDY12213 | Canola | nucleus | 39.41 | 39.19 |
| CDY19129 | Canola | nucleus | 39.69 | 38.65 |
| CDX67929 | Canola | nucleus | 42.37 | 38.31 |
| CDX79408 | Canola | nucleus | 42.09 | 38.21 |
| HORVU4Hr1G062510.2 | Barley | cytosol | 14.83 | 37.91 |
| CDY15339 | Canola | nucleus | 39.12 | 37.89 |
| CDY39874 | Canola | plasma membrane | 10.17 | 37.5 |
| CDY30748 | Canola | endoplasmic reticulum | 30.93 | 37.31 |
| HORVU7Hr1G036950.2 | Barley | cytosol | 8.9 | 34.43 |
| CDY43458 | Canola | nucleus | 39.12 | 34.11 |
| CDY08866 | Canola | nucleus | 34.75 | 33.42 |
| CDY03177 | Canola | nucleus | 38.98 | 33.41 |
| CDX77711 | Canola | nucleus | 38.56 | 33.17 |
| CDX76559 | Canola | nucleus | 34.18 | 32.97 |
| CDY67945 | Canola | nucleus | 32.06 | 32.95 |
| CDY33492 | Canola | nucleus | 37.01 | 32.91 |
| CDY42301 | Canola | nucleus | 31.92 | 32.75 |
| CDY43137 | Canola | nucleus | 31.78 | 32.66 |
| CDX89416 | Canola | nucleus | 29.52 | 32.2 |
| CDY62389 | Canola | cytosol | 22.18 | 32.11 |
| CDY49937 | Canola | nucleus | 30.93 | 31.56 |
| HORVU3Hr1G108430.1 | Barley | cytosol | 14.83 | 31.53 |
| CDX85461 | Canola | cytosol | 31.21 | 31.35 |
| CDY44946 | Canola | nucleus | 28.67 | 31.33 |
| CDY21211 | Canola | nucleus | 30.65 | 31.27 |
| CDY53691 | Canola | nucleus | 31.36 | 31.27 |
| CDX94443 | Canola | cytosol | 27.68 | 31.21 |
| CDY69499 | Canola | cytosol | 13.28 | 30.92 |
| CDY16938 | Canola | nucleus | 27.68 | 29.7 |
| CDY02713 | Canola | nucleus | 30.93 | 29.63 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078CD17 | EnsemblPlants:CDX74762 | ProteinID:CDX74762 | ProteinID:CDX74762.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00116732001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF487 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START_lipid-bd_dom | UniParc:UPI0004EDC978 | SEG:seg | : | : | : |
Description
BnaA05g05080D
Coordinates
chrLK031802:+:510085..513985
Molecular Weight (calculated)
78213.3 Da
IEP (calculated)
7.123
GRAVY (calculated)
-0.376
Length
708 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFSGFLHHD DDKTPGGESV GGGNHFFSPA AAMSGGPVQF SSPRLSLGLQ TNVENNGGEV GRTGESFEVS VTRRSPESRS GSDNVEALSG EDDLDASDRP
101: LKKKKRYHRH TPHQIQELES VFKECPHPDE KQRLDLSRRL NLDTRQVKFW FQNRRTQMKT QIERHENSLL RQENDKLRAE NMSVREAMRN PMCGHCGASA
201: HQLRIENSRL KDELDRLCAL AGKFINRSDD AGSHQLPNST LKLGVGVDEK SLYLELAVSA MDELVKMAQT SEPLWIRSSK GKREMLNREE YDKKVGMVII
301: NSLALVETLM DSERWAEMFP CMIAKNSTIE IISSGMGGTR NGAIQLMQAE LQLLSPLVPV RQVTFLRFCK QHAEGVWAVV DVSVDRVSDR GGSASARLPS
401: GCLVHDMPNG YSKVTWIDHT EYDETNIHHS YRPLVSSGLA FGSKRWVSAL QRQCESLAIL MSSAIPNRSK PTPAISSIGK KSMLRLAQRM TENFCRGVCA
501: SSSQKWSKLD IGNIDEDVRI MTRKNVNDSG EPPGILLSAA TSVWVPVTPR RLFDFLRDEL LRSEWDILSN GGPMQEIANI FKGQDHSNSV SLLRSTAMNA
601: SQSSMLILQE TSIDASGAVV VYAPVDIPAM HSVMNGGDSA YVALLPSGFA ILPDGQGTEE TGSLLTVAFQ ILVNSLPTAK LNVESIETVS NLISCTVQKI
701: RAALRCEK
101: LKKKKRYHRH TPHQIQELES VFKECPHPDE KQRLDLSRRL NLDTRQVKFW FQNRRTQMKT QIERHENSLL RQENDKLRAE NMSVREAMRN PMCGHCGASA
201: HQLRIENSRL KDELDRLCAL AGKFINRSDD AGSHQLPNST LKLGVGVDEK SLYLELAVSA MDELVKMAQT SEPLWIRSSK GKREMLNREE YDKKVGMVII
301: NSLALVETLM DSERWAEMFP CMIAKNSTIE IISSGMGGTR NGAIQLMQAE LQLLSPLVPV RQVTFLRFCK QHAEGVWAVV DVSVDRVSDR GGSASARLPS
401: GCLVHDMPNG YSKVTWIDHT EYDETNIHHS YRPLVSSGLA FGSKRWVSAL QRQCESLAIL MSSAIPNRSK PTPAISSIGK KSMLRLAQRM TENFCRGVCA
501: SSSQKWSKLD IGNIDEDVRI MTRKNVNDSG EPPGILLSAA TSVWVPVTPR RLFDFLRDEL LRSEWDILSN GGPMQEIANI FKGQDHSNSV SLLRSTAMNA
601: SQSSMLILQE TSIDASGAVV VYAPVDIPAM HSVMNGGDSA YVALLPSGFA ILPDGQGTEE TGSLLTVAFQ ILVNSLPTAK LNVESIETVS NLISCTVQKI
701: RAALRCEK
001: MNFNGFLDDG AGASKLLSDA PYNNHFSFSA VDTMLGSAAI APSQSLPFSS SGLSLGLQTN GEMSRNGEIM ESNVSRKSSR GEDVESRSES DNAEAVSGDD
101: LDTSDRPLKK KKRYHRHTPK QIQDLESVFK ECAHPDEKQR LDLSRRLNLD PRQVKFWFQN RRTQMKTQIE RHENALLRQE NDKLRAENMS VREAMRNPMC
201: GNCGGPAVIG EISMEEQHLR IENSRLKDEL DRVCALTGKF LGRSNGSHHI PDSALVLGVG VGSGGCNVGG GFTLSSPLLP QASPRFEISN GTGSGLVATV
301: NRQQPVSVSD FDQRSRYLDL ALAAMDELVK MAQTREPLWV RSSDSGFEVL NQEEYDTSFS RCVGPKQDGF VSEASKEAGT VIINSLALVE TLMDSERWAE
401: MFPSMVSRTS TTEIISSGMG GRNGALHLMH AELQLLSPLV PVRQVSFLRF CKQHAEGVWA VVDVSIDSIR EGSSSSCRRL PSGCLVQDMA NGYSKVTWIE
501: HTEYDENHIH RLYRPLLRCG LAFGAHRWMA ALQRQCECLT ILMSSTVSTS TNPSPINCNG RKSMLKLAKR MTDNFCGGVC ASSLQKWSKL NVGNVDEDVR
601: IMTRKSVNNP GEPPGIILNA ATSVWMPVSP RRLFDFLGNE RLRSEWDILS NGGPMKEMAH IAKGHDRSNS VSLLRASAIN ANQSSMLILQ ETSIDAAGAV
701: VVYAPVDIPA MQAVMNGGDS AYVALLPSGF AILPNGQAGT QRCAAEERNS IGNGGCMEEG GSLLTVAFQI LVNSLPTAKL TVESVETVNN LISCTVQKIK
801: AALHCDST
101: LDTSDRPLKK KKRYHRHTPK QIQDLESVFK ECAHPDEKQR LDLSRRLNLD PRQVKFWFQN RRTQMKTQIE RHENALLRQE NDKLRAENMS VREAMRNPMC
201: GNCGGPAVIG EISMEEQHLR IENSRLKDEL DRVCALTGKF LGRSNGSHHI PDSALVLGVG VGSGGCNVGG GFTLSSPLLP QASPRFEISN GTGSGLVATV
301: NRQQPVSVSD FDQRSRYLDL ALAAMDELVK MAQTREPLWV RSSDSGFEVL NQEEYDTSFS RCVGPKQDGF VSEASKEAGT VIINSLALVE TLMDSERWAE
401: MFPSMVSRTS TTEIISSGMG GRNGALHLMH AELQLLSPLV PVRQVSFLRF CKQHAEGVWA VVDVSIDSIR EGSSSSCRRL PSGCLVQDMA NGYSKVTWIE
501: HTEYDENHIH RLYRPLLRCG LAFGAHRWMA ALQRQCECLT ILMSSTVSTS TNPSPINCNG RKSMLKLAKR MTDNFCGGVC ASSLQKWSKL NVGNVDEDVR
601: IMTRKSVNNP GEPPGIILNA ATSVWMPVSP RRLFDFLGNE RLRSEWDILS NGGPMKEMAH IAKGHDRSNS VSLLRASAIN ANQSSMLILQ ETSIDAAGAV
701: VVYAPVDIPA MQAVMNGGDS AYVALLPSGF AILPNGQAGT QRCAAEERNS IGNGGCMEEG GSLLTVAFQI LVNSLPTAKL TVESVETVNN LISCTVQKIK
801: AALHCDST
Arabidopsis Description
HDG1HDG1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Q4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.