CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0526300-00	Rice	nucleus	14.45	96.18
Zm00001d021236_P004	Maize	nucleus	92.43	89.26
TraesCS5D01G320600.1	Wheat	nucleus	79.47	81.63
TraesCS5B01G315100.2	Wheat	nucleus	79.47	81.53
TraesCS5A01G314400.2	Wheat	nucleus	79.36	81.51
HORVU0Hr1G013510.1	Barley	cytosol	12.96	81.3
HORVU5Hr1G080700.2	Barley	nucleus	79.47	81.24
VIT_15s0048g02000.t01	Wine grape	nucleus	59.75	64.24
KRH40539	Soybean	nucleus	59.52	63.29
PGSC0003DMT400071377	Potato	nucleus	58.83	62.48
KRH48236	Soybean	nucleus	59.29	62.36
Solyc01g091630.2.1	Tomato	nucleus	58.6	62.24
KRH00641	Soybean	nucleus	58.49	62.04
CDY18903	Canola	nucleus	50.0	61.84
KRH65144	Soybean	nucleus	59.29	61.84
CDX74762	Canola	nucleus	50.11	61.72
EES02604	Sorghum	nucleus	56.42	60.37
Bra037355.1-P	Field mustard	nucleus	54.59	60.25
CDY51143	Canola	nucleus	54.59	60.25
CDY07201	Canola	nucleus	54.24	60.03
AT4G00730.1	Thale cress	nucleus	54.93	59.73
PGSC0003DMT400019986	Potato	nucleus	55.16	59.46
CDX91894	Canola	nucleus	53.67	58.94
Bra004934.1-P	Field mustard	nucleus	53.1	58.91
CDX67855	Canola	nucleus	52.64	58.85
CDX74347	Canola	nucleus	53.44	58.76
CDY45684	Canola	nucleus	52.75	58.67
Bra003439.1-P	Field mustard	nucleus	52.75	58.6
AT3G61150.1	Thale cress	nucleus	53.1	57.3
HORVU7Hr1G036950.2	Barley	cytosol	11.81	56.28
KXG26935	Sorghum	nucleus	48.97	53.24
HORVU4Hr1G062510.2	Barley	cytosol	16.28	51.26
EES11464	Sorghum	nucleus	43.58	48.16
EES13460	Sorghum	mitochondrion, nucleus	42.78	47.76
EES05874	Sorghum	nucleus	37.96	46.82
EER89393	Sorghum	nucleus	36.81	45.86
EES14500	Sorghum	nucleus	42.55	45.58
HORVU3Hr1G108430.1	Barley	cytosol	17.09	44.74
EER98409	Sorghum	nucleus	32.0	38.22
OQU81266	Sorghum	nucleus	33.37	37.84
KXG38837	Sorghum	nucleus	36.35	35.94
OQU87592	Sorghum	nucleus	28.67	35.16
OQU81174	Sorghum	nucleus	29.7	35.09
EES01587	Sorghum	nucleus	26.03	29.87

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	EntrezGene:8059030	UniProt:C5X640	ncoils:Coil	EnsemblPlants:EER99222
ProteinID:EER99222	ProteinID:EER99222.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	PFAM:PF00046
PFAM:PF01852	ScanProsite:PS00027	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF350
SMART:SM00234	SMART:SM00389	EnsemblPlantsGene:SORBI_3002G270900	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START_lipid-bd_dom
UniParc:UPI0001A83CFF	RefSeq:XP_002462701.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:65448185..65454356

Molecular Weight (calculated)

92215.7 Da

IEP (calculated)

6.374

GRAVY (calculated)

-0.251

Length

872 amino acids

Sequence
(BLAST)

001: MSFGGMFDGA AGSGVFSYDA TGGGGTGMHN PSRLIPAPPL PKPGGFGATG LSLGLQTNME GGQLADLSRM GLIGSGGSAS GGDGDSLGRA RGEDENDSRS
101: GSDNVDGASG DELDPDNSNP RKKKKRYHRH TPQQIQELEA VFKECPHPDE KQRMELSKRL NLESRQVKFW FQNRRTQMKT QIERHENALL RQENDKLRAE
201: NMTIREAMRN PICTNCGGAA VLGEVSLEEQ HLRIENARLK DELDRVCALA GKFLGRPISS GSSMSLQGCS GLELGVGTNG GFGLGPLGAS ALQPLPDLMG
301: AGGLPGPVGS AAAMRLPVGI GALDGAMHGA ADGIDRTVLL ELGLAAMEEL MKVAQMDEPL WLRSPDGGGG LETLNFDEYH RAFARVFGPS PAGYVSEATR
401: EAGIAIISSV DLVDSLMDAA RWSEMFPCIV ARASTTDIIS SGMGGTRSGS IQLMHAELQV LSPLVPIREV VFLRFCKQHA EGLWAVVDVS VDAILRPDGG
501: GNHHHHHAHN GGAAGYMGCR LLPTGCIVQD MNNGYSKVTW VVHAEYDEAV VHQLYRPLLQ SGQALGARRW LASLQRQCQY LAILCSNSLP ARDHAAITPV
601: GRRSMLKLAQ RMTDNFCAGV CASAAQKWRR LDEWRGVGEG GGGSSAGNGG GGAAGEGEEK VRMMARQSVG APGEPPGVVL SATTSVRLPV TSPQRVFDYL
701: RDEQRRGEWD ILANGEAMQE MDHIAKGQHH GNAVSLLRPN ATSGNQNNML ILQETCTDPS GSLVVYAPVD VQSMHVVMNG GDSAYVSLLP SGFAILPDGH
801: CQSSNPAQGS PNCSGGGNSS TGGSLVTVAF QILVNNLPTA KLTVESVETV SNLLSCTIQK IKSALQASIV TP

Best Arabidopsis Sequence Match ( AT4G00730.1 )
(BLAST)

001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTSI TPGGRKSMLK LAQRMTFNFC SGISAPSVHN WSKLTVGNVD
601: PDVRVMTRKS VDDPGEPPGI VLSAATSVWL PAAPQRLYDF LRNERMRCEW DILSNGGPMQ EMAHITKGQD QGVSLLRSNA MNANQSSMLI LQETCIDASG
701: ALVVYAPVDI PAMHVVMNGG DSSYVALLPS GFAVLPDGGI DGGGSGDGDQ RPVGGGSLLT VAFQILVNNL PTAKLTVESV ETVNNLISCT VQKIRAALQC
801: ES

Arabidopsis Description

ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.