Factsheet for TraesCS5D01G320600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G314400.2	Wheat	nucleus	99.53	99.53
TraesCS5B01G315100.2	Wheat	nucleus	98.7	98.59
HORVU5Hr1G080700.2	Barley	nucleus	96.47	96.01
HORVU0Hr1G013510.1	Barley	cytosol	15.55	94.96
Os09t0526300-00	Rice	nucleus	14.61	94.66
EER99222	Sorghum	nucleus	81.63	79.47
Zm00001d021236_P004	Maize	nucleus	80.57	75.75
HORVU7Hr1G036950.2	Barley	cytosol	14.61	67.76
VIT_15s0048g02000.t01	Wine grape	nucleus	58.54	61.28
CDY18903	Canola	nucleus	50.29	60.57
CDX74762	Canola	nucleus	50.29	60.31
KRH40539	Soybean	nucleus	58.07	60.12
KRH00641	Soybean	nucleus	57.6	59.49
KRH48236	Soybean	nucleus	57.83	59.23
PGSC0003DMT400071377	Potato	nucleus	57.24	59.2
Solyc01g091630.2.1	Tomato	nucleus	57.13	59.07
TraesCS6D01G237000.1	Wheat	nucleus	55.71	58.83
KRH65144	Soybean	nucleus	57.6	58.49
HORVU4Hr1G062510.2	Barley	cytosol	18.96	58.12
CDY51143	Canola	nucleus	54.06	58.1
Bra037355.1-P	Field mustard	nucleus	54.06	58.1
Bra004934.1-P	Field mustard	nucleus	53.59	57.89
AT4G00730.1	Thale cress	nucleus	54.53	57.73
CDY07201	Canola	nucleus	53.47	57.61
PGSC0003DMT400019986	Potato	nucleus	54.65	57.35
CDX91894	Canola	nucleus	53.59	57.3
CDX74347	Canola	nucleus	53.0	56.75
CDX67855	Canola	nucleus	51.83	56.41
CDY45684	Canola	nucleus	52.06	56.38
Bra003439.1-P	Field mustard	nucleus	51.94	56.18
AT3G61150.1	Thale cress	nucleus	52.3	54.95
HORVU3Hr1G108430.1	Barley	cytosol	20.02	51.05
TraesCS2D01G398600.1	Wheat	nucleus	44.88	48.6
TraesCS2D01G473700.1	Wheat	nucleus	43.23	47.29
TraesCS7D01G305200.1	Wheat	nucleus	43.46	46.36
TraesCS6D01G304300.1	Wheat	nucleus	37.1	45.99
TraesCS7D01G169000.1	Wheat	nucleus	7.42	42.28
TraesCS7D01G168900.1	Wheat	nucleus	7.07	40.27
TraesCS7D01G168700.1	Wheat	nucleus	34.63	40.16
TraesCS4D01G228800.1	Wheat	nucleus	8.95	35.51
TraesCS1D01G037100.1	Wheat	nucleus	8.83	35.21
TraesCS5D01G335900.1	Wheat	nucleus	30.62	34.53
TraesCS1D01G197300.1	Wheat	nucleus	35.1	33.75
TraesCS3D01G121300.1	Wheat	nucleus	8.01	32.69
TraesCS3D01G296500.3	Wheat	nucleus	30.51	32.62
TraesCS4D01G082600.1	Wheat	nucleus	30.62	32.3
TraesCS3D01G121500.1	Wheat	nucleus	8.01	30.49
TraesCS3D01G319200.1	Wheat	nucleus	24.03	29.87
TraesCS7D01G217200.1	Wheat	nucleus	7.42	28.25
TraesCS3D01G121400.1	Wheat	golgi, nucleus	8.24	18.04

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:IPR002913	PFAM:PF00046	PFAM:PF01852	ScanProsite:PS00027	PFscan:PS50071
PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF350	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689
SUPFAM:SSF55961	InterPro:START_lipid-bd_dom	EnsemblPlantsGene:TraesCS5D01G320600	EnsemblPlants:TraesCS5D01G320600.1	TIGR:cd00086	TIGR:cd08875
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:412738548..412744058

Molecular Weight (calculated)

90406.5 Da

IEP (calculated)

5.937

GRAVY (calculated)

-0.289

Length

849 amino acids

Sequence
(BLAST)

001: MSFGGMFDGA GSGVFSYDAG GGGPGMHNPG RLLAPPPIPR PAAGAGGGGF ASSTGLSLGL TNMEGGGQLG GAFMGSTGSG GDGDSLGRAR EDENDSRSGS
101: DNLDGASADE LDPDNSNPRK KKKRYHRHTP QQIQELEAVF KECPHPDEKQ RMELSRRLNL ESRQVKFWFQ NRRTQMKTQI ERHENALLRQ ENDKLRTENM
201: TIREAMRSPT CGNCGGAAVL GEVSLEEQHL RIENSRLKDE LDRVCALAGK FLGRPVSAIS SPLSLPSSLC SGLDLAVGSN NGFMGMGMQS IPDLMGGGSA
301: AMRLPTGIMG GGLDDGLGGE GVAIDRGALL ELGLAAMEEL VKVTQVDDPL WQPSLDIGLE TLNFDEYRRA FARVLGPSPA GYVSEATREV GIAIINSVDL
401: VNSLMNEARW SEMFPCVVAR ASTMEIISSG MGGTRSGSIQ LMRAELQVLS PLVPIREVTF LRFCKQHADG LWAIVDVSVD GVLRPDSGTG AGPAGYMGCR
501: LLPSGCIVED MQNGYAKVTW VVHAEYDEAA VHELYRPLLR SGQALGARRW LASLQRQCEY HAILCSNPHP NHGDRHEPIS PAGRRCMLRL AQRMADNFCA
601: GVCATAAQKW RRLDEWRVEG AGGRDPAGGE DKVRMMARQS VGAPGEPPGV VLSATTSVRL PGTPPQRVFD YLRDEQRRGE WDILANGEAM QEMDHIAKGQ
701: HHGNAVSLLR PNATSGNQNN MLILQETCTD ASGSLVVYAP VDVQSMHVVM GGGDSAYVSL LPSGFAILPD GHTAPAAATD PSPQGSSPNA HGGSSNNSPG
801: SLVTVAFQIL VNNLPTAKLT VESVDTVSNL LSCTIQKIKS ALQASIISP

Best Arabidopsis Sequence Match ( AT4G00730.1 )
(BLAST)

001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTSI TPGGRKSMLK LAQRMTFNFC SGISAPSVHN WSKLTVGNVD
601: PDVRVMTRKS VDDPGEPPGI VLSAATSVWL PAAPQRLYDF LRNERMRCEW DILSNGGPMQ EMAHITKGQD QGVSLLRSNA MNANQSSMLI LQETCIDASG
701: ALVVYAPVDI PAMHVVMNGG DSSYVALLPS GFAVLPDGGI DGGGSGDGDQ RPVGGGSLLT VAFQILVNNL PTAKLTVESV ETVNNLISCT VQKIRAALQC
801: ES

Arabidopsis Description

ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.