Factsheet for Os09t0526300-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0208100-00	Rice	nucleus	64.89	65.89
Os01t0760800-00	Rice	nucleus	48.09	47.01
Os08t0187500-01	Rice	nucleus	58.78	23.62
CDY18903	Canola	nucleus	80.15	14.89
CDX74762	Canola	nucleus	79.39	14.69
TraesCS5D01G320600.1	Wheat	nucleus	94.66	14.61
TraesCS5A01G314400.2	Wheat	nucleus	94.66	14.61
TraesCS5B01G315100.2	Wheat	nucleus	94.66	14.59
HORVU5Hr1G080700.2	Barley	nucleus	94.66	14.54
CDX67855	Canola	nucleus	86.26	14.49
EER99222	Sorghum	nucleus	96.18	14.45
Bra003439.1-P	Field mustard	nucleus	86.26	14.39
Os02t0674800-01	Rice	nucleus	87.79	14.3
CDY45684	Canola	nucleus	85.5	14.29
Bra004934.1-P	Field mustard	nucleus	85.5	14.25
CDY51143	Canola	nucleus	85.5	14.18
Bra037355.1-P	Field mustard	nucleus	85.5	14.18
CDX74347	Canola	nucleus	85.5	14.12
CDX91894	Canola	nucleus	85.5	14.11
Zm00001d021236_P004	Maize	nucleus	96.95	14.06
AT4G00730.1	Thale cress	nucleus	85.5	13.97
CDY07201	Canola	nucleus	83.97	13.96
KRH40539	Soybean	nucleus	87.02	13.9
KRH00641	Soybean	nucleus	87.02	13.87
AT3G61150.1	Thale cress	nucleus	85.5	13.86
VIT_15s0048g02000.t01	Wine grape	nucleus	85.5	13.81
KRH65144	Soybean	nucleus	87.79	13.76
KRH48236	Soybean	nucleus	87.02	13.75
PGSC0003DMT400071377	Potato	nucleus	85.5	13.64
Solyc01g091630.2.1	Tomato	nucleus	85.5	13.64
PGSC0003DMT400019986	Potato	nucleus	82.44	13.35
Os04t0569100-01	Rice	nucleus	80.15	13.03
Os08t0136100-01	Rice	nucleus	69.47	11.59
Os10t0575600-01	Rice	nucleus	62.6	9.3
Os01t0788800-01	Rice	nucleus	30.53	6.36
Os08t0292000-01	Rice	nucleus	32.06	5.31
HORVU3Hr1G108430.1	Barley	cytosol	10.69	4.2
Os04t0627000-02	Rice	cytosol, peroxisome	16.79	3.75
HORVU7Hr1G036950.2	Barley	cytosol	3.82	2.73
Os06t0207966-00	Rice	plastid	0.0	0.0
HORVU4Hr1G062510.2	Barley	cytosol	0.0	0.0
HORVU0Hr1G013510.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	UniProt:A0A0P0XPZ2	ProteinID:BAT09049.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356
EnsemblPlantsGene:Os09g0526300	EnsemblPlants:Os09t0526300-00	PFAM:PF00046	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326
PANTHER:PTHR24326:SF350	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI0000DD9836	:	:

Description

RICE OUTMOST CELL-SPECIFIC GENE 6Similar to Homeobox protein GLABRA2 (Homeobox-leucine zipper protein ATHB-10) (HD-ZIP protein ATHB-10). (Os09t0526300-00)

Coordinates

chr9:-:20573266..20573862

Molecular Weight (calculated)

15578.8 Da

IEP (calculated)

9.793

GRAVY (calculated)

-1.083

Length

131 amino acids

Sequence
(BLAST)

001: KKKRYHRHTP QQIQELEAVF KECPHPDEKQ RMELSRRLNL ESRQVKFWFQ NRRTQMKQTQ IERHENALLR QENDKLRAEN MTIREAMRNP MCASCGGAAV
101: LGEVSLEEQH LRIENARLKD ELDRVCALAG K

Best Arabidopsis Sequence Match ( AT3G61150.1 )
(BLAST)

001: MNFNGFLDDG AGASKLLSDA PYNNHFSFSA VDTMLGSAAI APSQSLPFSS SGLSLGLQTN GEMSRNGEIM ESNVSRKSSR GEDVESRSES DNAEAVSGDD
101: LDTSDRPLKK KKRYHRHTPK QIQDLESVFK ECAHPDEKQR LDLSRRLNLD PRQVKFWFQN RRTQMKTQIE RHENALLRQE NDKLRAENMS VREAMRNPMC
201: GNCGGPAVIG EISMEEQHLR IENSRLKDEL DRVCALTGKF LGRSNGSHHI PDSALVLGVG VGSGGCNVGG GFTLSSPLLP QASPRFEISN GTGSGLVATV
301: NRQQPVSVSD FDQRSRYLDL ALAAMDELVK MAQTREPLWV RSSDSGFEVL NQEEYDTSFS RCVGPKQDGF VSEASKEAGT VIINSLALVE TLMDSERWAE
401: MFPSMVSRTS TTEIISSGMG GRNGALHLMH AELQLLSPLV PVRQVSFLRF CKQHAEGVWA VVDVSIDSIR EGSSSSCRRL PSGCLVQDMA NGYSKVTWIE
501: HTEYDENHIH RLYRPLLRCG LAFGAHRWMA ALQRQCECLT ILMSSTVSTS TNPSPINCNG RKSMLKLAKR MTDNFCGGVC ASSLQKWSKL NVGNVDEDVR
601: IMTRKSVNNP GEPPGIILNA ATSVWMPVSP RRLFDFLGNE RLRSEWDILS NGGPMKEMAH IAKGHDRSNS VSLLRASAIN ANQSSMLILQ ETSIDAAGAV
701: VVYAPVDIPA MQAVMNGGDS AYVALLPSGF AILPNGQAGT QRCAAEERNS IGNGGCMEEG GSLLTVAFQI LVNSLPTAKL TVESVETVNN LISCTVQKIK
801: AALHCDST

Arabidopsis Description

HDG1HDG1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Q4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.