Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024701_P001 | Maize | nucleus | 87.96 | 89.84 |
| Os08t0136100-01 | Rice | nucleus | 74.82 | 77.58 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 61.3 | 75.61 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 73.1 | 74.75 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 73.1 | 74.75 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 73.22 | 74.69 |
| HORVU7Hr1G073440.1 | Barley | nucleus | 72.85 | 74.5 |
| HORVU7Hr1G073450.1 | Barley | mitochondrion, nucleus | 70.52 | 72.11 |
| PGSC0003DMT400061859 | Potato | nucleus | 60.93 | 71.99 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 64.13 | 71.9 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 63.76 | 71.49 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 65.72 | 70.67 |
| KRH56105 | Soybean | nucleus | 62.9 | 70.23 |
| Solyc03g031760.2.1 | Tomato | cytosol | 54.18 | 70.11 |
| PGSC0003DMT400029291 | Potato | nucleus | 59.83 | 69.87 |
| CDX90879 | Canola | nucleus | 60.57 | 68.85 |
| CDY21319 | Canola | nucleus | 60.57 | 68.85 |
| Bra000807.1-P | Field mustard | nucleus | 50.49 | 68.84 |
| KRH25398 | Soybean | plastid | 64.25 | 68.73 |
| Solyc10g005330.2.1 | Tomato | nucleus | 59.95 | 68.54 |
| EES11464 | Sorghum | nucleus | 66.34 | 68.44 |
| KRH13175 | Soybean | cytosol | 14.86 | 68.36 |
| CDY27417 | Canola | nucleus | 59.71 | 68.07 |
| KRH26803 | Soybean | nucleus | 65.23 | 67.99 |
| KRH77881 | Soybean | nucleus | 61.06 | 67.99 |
| KRH22554 | Soybean | nucleus | 65.11 | 67.86 |
| Bra015401.1-P | Field mustard | nucleus | 59.83 | 67.64 |
| CDX98703 | Canola | nucleus | 57.74 | 67.63 |
| AT1G05230.5 | Thale cress | nucleus | 59.83 | 67.55 |
| Bra032478.1-P | Field mustard | nucleus | 59.58 | 67.45 |
| GSMUA_Achr10P... | Banana | nucleus | 59.21 | 67.41 |
| CDY06167 | Canola | nucleus | 59.58 | 67.36 |
| KRH27601 | Soybean | nucleus | 60.57 | 67.35 |
| CDX94054 | Canola | nucleus | 57.49 | 67.34 |
| AT4G04890.1 | Thale cress | nucleus | 61.43 | 67.29 |
| CDX76399 | Canola | nucleus | 58.85 | 66.99 |
| CDY16639 | Canola | nucleus | 60.2 | 66.85 |
| EES13460 | Sorghum | mitochondrion, nucleus | 64.13 | 66.84 |
| CDX94586 | Canola | nucleus | 60.07 | 66.8 |
| Bra029527.1-P | Field mustard | nucleus | 60.81 | 66.44 |
| PGSC0003DMT400005277 | Potato | nucleus | 59.58 | 66.17 |
| AT4G21750.3 | Thale cress | nucleus | 61.92 | 66.14 |
| Solyc02g080260.2.1 | Tomato | nucleus | 60.44 | 65.51 |
| GSMUA_Achr11P... | Banana | plastid | 63.27 | 65.27 |
| CDY66622 | Canola | nucleus | 58.6 | 65.25 |
| Bra038757.1-P | Field mustard | nucleus | 57.99 | 65.1 |
| CDY10041 | Canola | nucleus | 59.58 | 64.93 |
| CDX79091 | Canola | nucleus | 59.09 | 64.48 |
| Bra020872.1-P | Field mustard | nucleus | 58.72 | 63.9 |
| Bra013556.1-P | Field mustard | nucleus | 52.7 | 62.17 |
| CDY49515 | Canola | plasma membrane | 60.32 | 60.54 |
| CDY71572 | Canola | nucleus | 29.12 | 60.31 |
| CDY46842 | Canola | nucleus | 60.2 | 59.04 |
| KRG91238 | Soybean | nucleus | 51.72 | 57.59 |
| CDY23096 | Canola | nucleus | 8.97 | 55.3 |
| KRH35579 | Soybean | nucleus | 51.72 | 54.11 |
| EES02604 | Sorghum | nucleus | 48.16 | 48.1 |
| EES05874 | Sorghum | nucleus | 41.4 | 47.67 |
| EER89393 | Sorghum | nucleus | 40.42 | 47.0 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 13.27 | 45.57 |
| KXG26935 | Sorghum | nucleus | 44.72 | 45.39 |
| EER99222 | Sorghum | nucleus | 45.58 | 42.55 |
| PGSC0003DMT400037397 | Potato | cytosol | 23.22 | 38.49 |
| Solyc10g006420.2.1 | Tomato | cytosol | 23.96 | 37.0 |
| KRH22254 | Soybean | cytosol | 24.2 | 36.82 |
| KXG38837 | Sorghum | nucleus | 39.8 | 36.73 |
| OQU87592 | Sorghum | nucleus | 29.98 | 34.32 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 13.88 | 34.24 |
| EER98409 | Sorghum | nucleus | 29.85 | 33.29 |
| OQU81266 | Sorghum | nucleus | 29.12 | 30.82 |
| OQU81174 | Sorghum | nucleus | 27.15 | 29.95 |
| EES01587 | Sorghum | nucleus | 27.76 | 29.74 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | UniProt:C5YMY2 | ncoils:Coil | EnsemblPlants:EES14500 |
| ProteinID:EES14500 | ProteinID:EES14500.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 |
| GO:GO:0043565 | GO:GO:0090305 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | InterPro:IPR023393 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF349 | SMART:SM00234 | SMART:SM00389 | EnsemblPlantsGene:SORBI_3007G032100 |
| SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI00081ABBA1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr7:-:2841278..2846378
Molecular Weight (calculated)
86802.3 Da
IEP (calculated)
6.009
GRAVY (calculated)
-0.248
Length
814 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGGLMIPGR NMPTAAAMIG GLASYAASLG QNMMDGHHQL AMMQQQQHQN HGQQQQHPPQ AATSESDARG PRHDELMMES KSGSDNMEGG AGSGSGGEEL
101: QEDLSLQPAR KKRYHRHTQH QIQELEAFFK EYPHPDDKQR KELSRELGLE PLQVKFWFQN KRTQMKTQQE RHENMQLRAE NEKLRAENAR YKDALANASC
201: PNCGGPATAV IGEMSFDEHH LRIENARLRD EVDRISTIAA KYVGKPAGSL LPNLSNISSA SMAPYPPPPP LSSHHLLPGG TDMFGGLHLH GAAAGFDKGL
301: VVELAVAAME ELVRMAQLGE PLWIPALVVD GATIETLNEE EYARGFPSGV GPKLPELRSE ASRETVVVIM NHVNLIEMLM DVNQWSTLFS SIVSRAATLE
401: VLSTGVAGNY NGALQLMTAE FQMPSPLVPT RESQFLRYCK QHTDGSWAVV DVSVEGLRAS GQAGARGRRR PSGCLIQEMP NGYSRVTWVE HVEADDMMVH
501: DLYRPLVCSG LAFGARRWAA ALERQCERLA SAMASGVPAG PSSGGDAVGV VTSVEGRRSM LRLAERMVTS FCGGVTASTT HQWTKLSGSG AEDVRVMTRK
601: SVDDPGRPPG IILNAATSFW LPVPPARVFG FLRDDATRSE WDILSNGGDV QEMAHIANGR DHGNAVSLLR VNNANSNQSN MLILQECCTD ATGSYVIYAP
701: VDVVAMNVVL NGGDPDYVAL LPSGFAILPD GSGAGGAPPG FAVLPDGPGA GGGGGGGGGS LLTVAFQILV DSVPTAKLSL GSVATVNSLI ACTVERIKAA
801: VAADNIGGGG AVPQ
101: QEDLSLQPAR KKRYHRHTQH QIQELEAFFK EYPHPDDKQR KELSRELGLE PLQVKFWFQN KRTQMKTQQE RHENMQLRAE NEKLRAENAR YKDALANASC
201: PNCGGPATAV IGEMSFDEHH LRIENARLRD EVDRISTIAA KYVGKPAGSL LPNLSNISSA SMAPYPPPPP LSSHHLLPGG TDMFGGLHLH GAAAGFDKGL
301: VVELAVAAME ELVRMAQLGE PLWIPALVVD GATIETLNEE EYARGFPSGV GPKLPELRSE ASRETVVVIM NHVNLIEMLM DVNQWSTLFS SIVSRAATLE
401: VLSTGVAGNY NGALQLMTAE FQMPSPLVPT RESQFLRYCK QHTDGSWAVV DVSVEGLRAS GQAGARGRRR PSGCLIQEMP NGYSRVTWVE HVEADDMMVH
501: DLYRPLVCSG LAFGARRWAA ALERQCERLA SAMASGVPAG PSSGGDAVGV VTSVEGRRSM LRLAERMVTS FCGGVTASTT HQWTKLSGSG AEDVRVMTRK
601: SVDDPGRPPG IILNAATSFW LPVPPARVFG FLRDDATRSE WDILSNGGDV QEMAHIANGR DHGNAVSLLR VNNANSNQSN MLILQECCTD ATGSYVIYAP
701: VDVVAMNVVL NGGDPDYVAL LPSGFAILPD GSGAGGAPPG FAVLPDGPGA GGGGGGGGGS LLTVAFQILV DSVPTAKLSL GSVATVNSLI ACTVERIKAA
801: VAADNIGGGG AVPQ
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.