Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G308400.1 | Wheat | nucleus | 98.5 | 98.74 |
| HORVU7Hr1G073440.1 | Barley | nucleus | 98.12 | 98.37 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 98.12 | 98.37 |
| HORVU7Hr1G073450.1 | Barley | mitochondrion, nucleus | 95.61 | 95.85 |
| Os08t0136100-01 | Rice | nucleus | 82.58 | 83.95 |
| Zm00001d024701_P001 | Maize | nucleus | 74.31 | 74.4 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 61.4 | 74.24 |
| EES14500 | Sorghum | nucleus | 74.69 | 73.22 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 66.42 | 73.0 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 68.67 | 72.39 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 65.54 | 72.04 |
| PGSC0003DMT400061859 | Potato | nucleus | 61.4 | 71.12 |
| KRH56105 | Soybean | nucleus | 64.29 | 70.37 |
| KRH25398 | Soybean | plastid | 66.42 | 69.65 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 67.54 | 69.55 |
| CDX90879 | Canola | nucleus | 62.28 | 69.41 |
| CDY21319 | Canola | nucleus | 62.16 | 69.27 |
| Solyc03g031760.2.1 | Tomato | cytosol | 54.26 | 68.84 |
| PGSC0003DMT400029291 | Potato | nucleus | 60.03 | 68.72 |
| KRH22554 | Soybean | nucleus | 67.04 | 68.5 |
| KRH26803 | Soybean | nucleus | 67.04 | 68.5 |
| Bra015401.1-P | Field mustard | nucleus | 61.65 | 68.33 |
| CDY06167 | Canola | nucleus | 61.53 | 68.19 |
| Bra032478.1-P | Field mustard | nucleus | 61.4 | 68.15 |
| AT1G05230.5 | Thale cress | nucleus | 61.53 | 68.1 |
| Solyc10g005330.2.1 | Tomato | nucleus | 60.65 | 67.98 |
| KRH77881 | Soybean | nucleus | 61.65 | 67.31 |
| KRH13175 | Soybean | cytosol | 14.91 | 67.23 |
| CDY27417 | Canola | nucleus | 60.15 | 67.23 |
| KRH27601 | Soybean | nucleus | 61.65 | 67.21 |
| GSMUA_Achr10P... | Banana | nucleus | 60.15 | 67.13 |
| CDY16639 | Canola | nucleus | 61.65 | 67.12 |
| CDX94586 | Canola | nucleus | 61.53 | 67.08 |
| CDX76399 | Canola | nucleus | 60.03 | 66.99 |
| PGSC0003DMT400005277 | Potato | nucleus | 61.15 | 66.58 |
| Bra000807.1-P | Field mustard | nucleus | 49.75 | 66.5 |
| CDX98703 | Canola | nucleus | 57.89 | 66.47 |
| Bra029527.1-P | Field mustard | nucleus | 62.03 | 66.44 |
| AT4G04890.1 | Thale cress | nucleus | 61.78 | 66.35 |
| CDX94054 | Canola | nucleus | 57.77 | 66.33 |
| GSMUA_Achr11P... | Banana | plastid | 65.41 | 66.16 |
| CDY10041 | Canola | nucleus | 61.53 | 65.73 |
| Solyc02g080260.2.1 | Tomato | nucleus | 61.78 | 65.65 |
| AT4G21750.3 | Thale cress | nucleus | 62.66 | 65.62 |
| CDY66622 | Canola | nucleus | 59.15 | 64.57 |
| Bra038757.1-P | Field mustard | nucleus | 58.15 | 64.0 |
| Bra020872.1-P | Field mustard | nucleus | 59.9 | 63.9 |
| CDX79091 | Canola | nucleus | 59.27 | 63.4 |
| CDY71572 | Canola | nucleus | 30.58 | 62.09 |
| Bra013556.1-P | Field mustard | nucleus | 53.01 | 61.3 |
| CDY49515 | Canola | plasma membrane | 62.03 | 61.04 |
| CDY46842 | Canola | nucleus | 61.9 | 59.52 |
| KRG91238 | Soybean | nucleus | 52.51 | 57.32 |
| CDY23096 | Canola | nucleus | 9.27 | 56.06 |
| KRH35579 | Soybean | nucleus | 52.51 | 53.86 |
| TraesCS6B01G269700.1 | Wheat | nucleus | 48.37 | 48.01 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 41.48 | 47.49 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 13.16 | 44.3 |
| TraesCS5B01G315100.2 | Wheat | nucleus | 46.24 | 43.41 |
| TraesCS2B01G419200.1 | Wheat | nucleus | 42.61 | 43.31 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 39.22 | 42.88 |
| TraesCS7B01G072800.1 | Wheat | nucleus | 7.77 | 42.18 |
| TraesCS3B01G331200.1 | Wheat | nucleus | 36.59 | 38.68 |
| PGSC0003DMT400037397 | Potato | cytosol | 23.43 | 38.09 |
| Solyc10g006420.2.1 | Tomato | cytosol | 24.31 | 36.81 |
| TraesCS1B01G208400.1 | Wheat | nucleus | 40.98 | 36.74 |
| KRH22254 | Soybean | cytosol | 24.56 | 36.64 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 14.41 | 34.85 |
| TraesCS3B01G354900.1 | Wheat | nucleus | 28.2 | 32.94 |
| TraesCS4B01G227900.1 | Wheat | nucleus | 8.77 | 31.39 |
| TraesCS3B01G138400.1 | Wheat | nucleus | 8.27 | 30.7 |
| TraesCS5B01G330300.1 | Wheat | nucleus | 28.2 | 29.96 |
| TraesCS1B01G045500.1 | Wheat | nucleus | 8.15 | 29.82 |
| TraesCS3B01G138600.1 | Wheat | nucleus | 7.77 | 28.84 |
| TraesCS4B01G084700.16 | Wheat | extracellular, golgi | 28.45 | 27.99 |
| TraesCS3B01G138800.1 | Wheat | nucleus | 6.39 | 26.98 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR002913 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF349 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:TraesCS7B01G208600 | EnsemblPlants:TraesCS7B01G208600.1 | TIGR:cd00086 | TIGR:cd08875 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:381824085..381829068
Molecular Weight (calculated)
85652.3 Da
IEP (calculated)
6.430
GRAVY (calculated)
-0.353
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGGMMIPGR NMIGRSNGAG VAYASSSSSA LSLGQNLMDG MHHHQLPAML QHQMVDHHLL LPQHHHHPHQ QAATSESDAR GPHGGGNNNS SNNNEELEMS
101: KSGTGSDNNL DGEGGGGGGG ENDEQEDPAG QHPRKKKRYH RHTQHQIQEL EAFFKECPHP DDKQRKELSR SLSLEPLQVK FWFQNKRTQI KTQHERQENT
201: ALRTENEKLR AENMRYKEAL ANASCPNCGG PAAIGEMSFD EHHLRVENAR LRDEIDRISA IAAKYVGGKP GSGVAVASAS YPPLPPQSSG RSALDHLGMP
301: GMFGGAEFDK PMVIELAVAA MEELVRMAQL GEPLWVPSLD GEALGEEEYA RAFPRGALGP KSPELRSEAS RETDVVIMNH VSLVEMLMDV RQWSALFSSI
401: VSRAATLDVL STGVAGNHDG ALQLMSAEFQ MPSPLVPTRD TQFLRYCKQH PGGAWAVVDV SLDDGLRSAA RVGGHFRRRA SGCLIQEMPN GYSKVTWVEH
501: VEAGDDAMVH DLYRPLVNSG LAFGARRWTS TLKRQCERLA SAMATVPSSG GDVITTAEGR RSMLKLAERM TASFCGGVTA STTHQWTTLS GSGAEDVRVM
601: TRKSVDDPGR PPGIILNAAT SFWLPVPPSR VFGFLRDDST RSEWDILSNG GVVQEMAHIA NGSHHGNAVS LLRVNNANSN QSNMLILQEC CTDATGSYVV
701: YAPVDVVAMN VVLNGGDPDY VALLPSGFAI LPDGPAGAPD AGGSLLTVAF QILVDSVPTA KLSLGSVATV NSLIACTVDR IKAALVVSPG DNAGTAAR
101: KSGTGSDNNL DGEGGGGGGG ENDEQEDPAG QHPRKKKRYH RHTQHQIQEL EAFFKECPHP DDKQRKELSR SLSLEPLQVK FWFQNKRTQI KTQHERQENT
201: ALRTENEKLR AENMRYKEAL ANASCPNCGG PAAIGEMSFD EHHLRVENAR LRDEIDRISA IAAKYVGGKP GSGVAVASAS YPPLPPQSSG RSALDHLGMP
301: GMFGGAEFDK PMVIELAVAA MEELVRMAQL GEPLWVPSLD GEALGEEEYA RAFPRGALGP KSPELRSEAS RETDVVIMNH VSLVEMLMDV RQWSALFSSI
401: VSRAATLDVL STGVAGNHDG ALQLMSAEFQ MPSPLVPTRD TQFLRYCKQH PGGAWAVVDV SLDDGLRSAA RVGGHFRRRA SGCLIQEMPN GYSKVTWVEH
501: VEAGDDAMVH DLYRPLVNSG LAFGARRWTS TLKRQCERLA SAMATVPSSG GDVITTAEGR RSMLKLAERM TASFCGGVTA STTHQWTTLS GSGAEDVRVM
601: TRKSVDDPGR PPGIILNAAT SFWLPVPPSR VFGFLRDDST RSEWDILSNG GVVQEMAHIA NGSHHGNAVS LLRVNNANSN QSNMLILQEC CTDATGSYVV
701: YAPVDVVAMN VVLNGGDPDY VALLPSGFAI LPDGPAGAPD AGGSLLTVAF QILVDSVPTA KLSLGSVATV NSLIACTVDR IKAALVVSPG DNAGTAAR
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.