Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90879 | Canola | nucleus | 99.3 | 99.3 |
| Bra000807.1-P | Field mustard | nucleus | 78.35 | 93.97 |
| CDY16639 | Canola | nucleus | 95.53 | 93.32 |
| CDX94586 | Canola | nucleus | 95.39 | 93.31 |
| AT4G04890.1 | Thale cress | nucleus | 94.41 | 90.98 |
| CDX76399 | Canola | nucleus | 85.75 | 85.87 |
| CDX98703 | Canola | nucleus | 83.1 | 85.61 |
| CDY23096 | Canola | nucleus | 15.78 | 85.61 |
| CDY27417 | Canola | nucleus | 85.2 | 85.43 |
| CDX94054 | Canola | nucleus | 82.68 | 85.18 |
| CDY66622 | Canola | nucleus | 84.5 | 82.76 |
| CDX79091 | Canola | nucleus | 85.61 | 82.17 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 70.95 | 76.97 |
| KRH27601 | Soybean | nucleus | 77.65 | 75.96 |
| Os04t0627000-02 | Rice | cytosol, peroxisome | 61.73 | 75.43 |
| KRH77881 | Soybean | nucleus | 76.96 | 75.38 |
| CDY06167 | Canola | nucleus | 72.63 | 72.22 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 71.23 | 70.25 |
| CDY10041 | Canola | nucleus | 72.07 | 69.08 |
| EES11464 | Sorghum | nucleus | 74.72 | 67.81 |
| GSMUA_Achr10P... | Banana | nucleus | 66.34 | 66.43 |
| EES13460 | Sorghum | mitochondrion, nucleus | 72.21 | 66.2 |
| TraesCS2D01G473700.1 | Wheat | nucleus | 71.23 | 65.72 |
| CDY71572 | Canola | nucleus | 36.03 | 65.65 |
| TraesCS2B01G497500.1 | Wheat | nucleus | 70.95 | 65.55 |
| TraesCS2A01G474000.1 | Wheat | nucleus | 70.95 | 65.38 |
| Zm00001d049443_P005 | Maize | nucleus | 72.49 | 65.2 |
| Zm00001d002234_P003 | Maize | nucleus | 72.07 | 64.99 |
| Os08t0136100-01 | Rice | nucleus | 71.09 | 64.84 |
| GSMUA_Achr11P... | Banana | plastid | 71.37 | 64.77 |
| CDY49515 | Canola | plasma membrane | 71.93 | 63.5 |
| Zm00001d026351_P003 | Maize | nucleus | 74.02 | 62.8 |
| TraesCS7A01G308400.1 | Wheat | nucleus | 69.41 | 62.44 |
| TraesCS7D01G305200.1 | Wheat | nucleus | 69.27 | 62.31 |
| TraesCS7B01G208600.1 | Wheat | nucleus | 69.27 | 62.16 |
| CDY46842 | Canola | nucleus | 71.93 | 62.05 |
| Zm00001d000247_P001 | Maize | plasma membrane | 61.87 | 61.61 |
| Zm00001d024701_P001 | Maize | nucleus | 68.3 | 61.36 |
| EES14500 | Sorghum | nucleus | 68.85 | 60.57 |
| CDY12213 | Canola | nucleus | 50.0 | 50.28 |
| CDY48272 | Canola | nucleus | 49.3 | 50.14 |
| CDY18903 | Canola | nucleus | 48.46 | 49.22 |
| CDX74762 | Canola | nucleus | 48.32 | 48.87 |
| CDY30748 | Canola | endoplasmic reticulum | 39.94 | 48.72 |
| CDY51143 | Canola | nucleus | 53.49 | 48.48 |
| CDX74347 | Canola | nucleus | 53.63 | 48.42 |
| CDY07201 | Canola | nucleus | 53.21 | 48.35 |
| CDX96744 | Canola | nucleus | 45.39 | 48.29 |
| CDY19129 | Canola | nucleus | 48.74 | 48.01 |
| CDX91894 | Canola | nucleus | 53.21 | 47.98 |
| CDX67855 | Canola | nucleus | 52.23 | 47.95 |
| CDY45684 | Canola | nucleus | 52.37 | 47.83 |
| CDY15339 | Canola | nucleus | 48.46 | 47.47 |
| CDY26204 | Canola | nucleus | 42.18 | 47.41 |
| CDX83884 | Canola | nucleus | 44.97 | 47.01 |
| CDY31916 | Canola | nucleus | 43.85 | 46.66 |
| CDY19185 | Canola | nucleus | 44.13 | 46.33 |
| CDY42097 | Canola | nucleus | 33.38 | 46.23 |
| CDY00515 | Canola | nucleus | 43.44 | 46.21 |
| CDX68229 | Canola | nucleus | 45.25 | 46.09 |
| CDY11109 | Canola | nucleus | 45.39 | 45.77 |
| CDY26205 | Canola | nucleus | 43.99 | 45.65 |
| CDX96471 | Canola | nucleus | 45.39 | 45.26 |
| CDX72984 | Canola | nucleus | 44.83 | 44.9 |
| Os08t0187500-01 | Rice | nucleus | 19.55 | 42.94 |
| CDX89415 | Canola | cytosol, mitochondrion | 10.47 | 42.13 |
| CDY43458 | Canola | nucleus | 44.41 | 39.16 |
| CDY03177 | Canola | nucleus | 44.55 | 38.62 |
| CDY39874 | Canola | plasma membrane | 10.06 | 37.5 |
| CDX76559 | Canola | nucleus | 38.41 | 37.47 |
| CDY33492 | Canola | nucleus | 41.62 | 37.44 |
| CDX77711 | Canola | nucleus | 43.02 | 37.42 |
| CDY08866 | Canola | nucleus | 38.13 | 37.09 |
| CDX79408 | Canola | nucleus | 40.22 | 36.92 |
| CDX67929 | Canola | nucleus | 40.22 | 36.78 |
| CDX85461 | Canola | cytosol | 35.75 | 36.31 |
| CDY42301 | Canola | nucleus | 34.64 | 35.94 |
| CDY67945 | Canola | nucleus | 34.5 | 35.85 |
| CDY62389 | Canola | cytosol | 24.3 | 35.58 |
| CDY43137 | Canola | nucleus | 34.08 | 35.41 |
| CDY44946 | Canola | nucleus | 31.84 | 35.19 |
| CDY53691 | Canola | nucleus | 34.78 | 35.07 |
| CDY02713 | Canola | nucleus | 35.75 | 34.64 |
| CDY16938 | Canola | nucleus | 31.56 | 34.24 |
| CDY49937 | Canola | nucleus | 32.96 | 34.01 |
| CDY69499 | Canola | cytosol | 14.39 | 33.88 |
| CDY21211 | Canola | nucleus | 32.82 | 33.86 |
| CDX89416 | Canola | nucleus | 28.21 | 31.12 |
| CDX94443 | Canola | cytosol | 26.4 | 30.1 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078G7D4 | UniProt:A0A078G7D4 | EnsemblPlants:CDY21319 | ProteinID:CDY21319 |
| ProteinID:CDY21319.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00015660001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF320 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom |
| UniParc:UPI0004EF0D18 | : | : | : | : | : |
Description
BnaC03g30030DBnaC03g30030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7D4]
Coordinates
chrLK032119:-:555120..559922
Molecular Weight (calculated)
78918.6 Da
IEP (calculated)
5.889
GRAVY (calculated)
-0.337
Length
716 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHPNMFESH HMFDMTTKST SDNDFGITGS REDDFETKSG TEVTTENPSG EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLG
101: LEPLQIKFWF QNKRTQMKAQ HERHDNQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPIGSS
201: FAPLAINAPS RSLDLEVGNF GNQAVSIPSE SDKPMIIELA VAAMEELVRM AQIGDPLWVS TDNSIEVLNE EEYFRTFPRG IGPKPLGLRS EASRESAVVI
301: MNHINLVEIL MDVNQWSCVF SGIVSRALTL EVLSTGVAGN YNGALQVMTA EFQVPSPLVP TRENYFVRYC KQHSDGSWAL VDVSLDSLRP NPISRTRRRP
401: SGCLIQELPN GYSKVTWVEH MEVDDRSVHT MYKPLVHSGL AFGARRWVST LERQCERLAS SMASNIPASD LSVITSPEGR KSMLKLAERM VMSFCSGVGA
501: STAHAWTTMS STGSDDVRVM TRKSMDDPGR PPGIVLSAAT SFWIPVAPKR VFDFLRDENS RSEWDILSNG GMVQEMAHIA NGREPGNCVS LLRVNSGNSS
601: QSNMLILQES CTDASGSYVI YAPVDIVAMN VVLSGGDPDY VALLPSGFAI LPDVVSSSTA SESCGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV
701: ERIKAAVACD RGGGGP
101: LEPLQIKFWF QNKRTQMKAQ HERHDNQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPIGSS
201: FAPLAINAPS RSLDLEVGNF GNQAVSIPSE SDKPMIIELA VAAMEELVRM AQIGDPLWVS TDNSIEVLNE EEYFRTFPRG IGPKPLGLRS EASRESAVVI
301: MNHINLVEIL MDVNQWSCVF SGIVSRALTL EVLSTGVAGN YNGALQVMTA EFQVPSPLVP TRENYFVRYC KQHSDGSWAL VDVSLDSLRP NPISRTRRRP
401: SGCLIQELPN GYSKVTWVEH MEVDDRSVHT MYKPLVHSGL AFGARRWVST LERQCERLAS SMASNIPASD LSVITSPEGR KSMLKLAERM VMSFCSGVGA
501: STAHAWTTMS STGSDDVRVM TRKSMDDPGR PPGIVLSAAT SFWIPVAPKR VFDFLRDENS RSEWDILSNG GMVQEMAHIA NGREPGNCVS LLRVNSGNSS
601: QSNMLILQES CTDASGSYVI YAPVDIVAMN VVLSGGDPDY VALLPSGFAI LPDVVSSSTA SESCGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV
701: ERIKAAVACD RGGGGP
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.