Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96744 | Canola | nucleus | 95.16 | 73.11 |
| CDX83884 | Canola | nucleus | 94.58 | 71.39 |
| Bra016578.1-P | Field mustard | nucleus | 93.62 | 70.76 |
| Os06t0208100-00 | Rice | nucleus | 17.6 | 70.54 |
| CDY26204 | Canola | nucleus | 82.98 | 67.35 |
| CDY19185 | Canola | nucleus | 83.17 | 63.05 |
| AT1G17920.1 | Thale cress | nucleus | 82.2 | 61.86 |
| CDY26205 | Canola | nucleus | 82.2 | 61.59 |
| CDX68229 | Canola | nucleus | 68.47 | 50.36 |
| CDY11109 | Canola | nucleus | 69.05 | 50.28 |
| CDX72984 | Canola | nucleus | 68.28 | 49.37 |
| CDX96471 | Canola | nucleus | 68.47 | 49.3 |
| VIT_17s0053g00780.t01 | Wine grape | nucleus | 63.83 | 46.48 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 52.61 | 45.11 |
| KRH09477 | Soybean | nucleus | 61.9 | 44.57 |
| KRH38939 | Soybean | nucleus | 62.09 | 44.46 |
| PGSC0003DMT400069312 | Potato | nucleus | 58.61 | 42.38 |
| Solyc03g098200.2.1 | Tomato | nucleus | 58.8 | 42.16 |
| Solyc06g072310.2.1 | Tomato | nucleus | 58.03 | 41.84 |
| KRH60596 | Soybean | nucleus | 57.64 | 41.8 |
| KRH41898 | Soybean | nucleus | 57.64 | 41.33 |
| GSMUA_Achr10P... | Banana | nucleus | 54.55 | 39.66 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 52.03 | 39.27 |
| Zm00001d018225_P001 | Maize | nucleus | 52.42 | 39.16 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 51.64 | 38.98 |
| Zm00001d052133_P001 | Maize | nucleus | 52.61 | 38.97 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 52.03 | 38.59 |
| EES05874 | Sorghum | nucleus | 52.61 | 38.47 |
| CDY71572 | Canola | nucleus | 28.63 | 37.66 |
| Zm00001d037140_P004 | Maize | nucleus | 49.9 | 37.55 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 53.58 | 37.48 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 53.19 | 37.36 |
| CDY23096 | Canola | nucleus | 9.48 | 37.12 |
| Zm00001d044973_P001 | Maize | nucleus | 49.32 | 37.01 |
| EER89393 | Sorghum | nucleus | 49.71 | 36.71 |
| GSMUA_Achr10P... | Banana | nucleus | 48.16 | 36.51 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 47.97 | 34.21 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 47.97 | 33.88 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 47.78 | 33.84 |
| CDY21319 | Canola | nucleus | 46.23 | 33.38 |
| CDX90879 | Canola | nucleus | 46.03 | 33.24 |
| CDY27417 | Canola | nucleus | 45.65 | 33.05 |
| CDX98703 | Canola | nucleus | 44.29 | 32.95 |
| CDX94054 | Canola | nucleus | 44.1 | 32.81 |
| CDX76399 | Canola | nucleus | 45.07 | 32.59 |
| CDY16639 | Canola | nucleus | 46.03 | 32.47 |
| CDY66622 | Canola | nucleus | 45.84 | 32.42 |
| CDY06167 | Canola | nucleus | 45.07 | 32.36 |
| CDX94586 | Canola | nucleus | 45.65 | 32.24 |
| CDX79091 | Canola | nucleus | 45.65 | 31.64 |
| CDY10041 | Canola | nucleus | 44.68 | 30.92 |
| CDY16938 | Canola | nucleus | 38.49 | 30.15 |
| CDX74762 | Canola | nucleus | 41.2 | 30.08 |
| CDY18903 | Canola | nucleus | 41.01 | 30.07 |
| CDY00515 | Canola | nucleus | 37.91 | 29.12 |
| CDY51143 | Canola | nucleus | 44.29 | 28.99 |
| CDY31916 | Canola | nucleus | 37.72 | 28.97 |
| CDX67855 | Canola | nucleus | 43.52 | 28.85 |
| CDY07201 | Canola | nucleus | 43.91 | 28.81 |
| CDX91894 | Canola | nucleus | 44.1 | 28.72 |
| CDY45684 | Canola | nucleus | 43.33 | 28.57 |
| CDX74347 | Canola | nucleus | 43.71 | 28.5 |
| CDY49515 | Canola | plasma membrane | 44.68 | 28.48 |
| CDY48272 | Canola | nucleus | 38.68 | 28.41 |
| CDX85461 | Canola | cytosol | 38.68 | 28.37 |
| CDY12213 | Canola | nucleus | 38.68 | 28.09 |
| CDY46842 | Canola | nucleus | 44.87 | 27.95 |
| CDY44946 | Canola | nucleus | 35.01 | 27.93 |
| CDY19129 | Canola | nucleus | 38.88 | 27.65 |
| CDY15339 | Canola | nucleus | 38.88 | 27.5 |
| CDY53691 | Canola | nucleus | 37.52 | 27.32 |
| CDY43137 | Canola | nucleus | 36.36 | 27.29 |
| CDY67945 | Canola | nucleus | 36.17 | 27.14 |
| CDX76559 | Canola | nucleus | 38.3 | 26.98 |
| CDY42301 | Canola | nucleus | 35.78 | 26.81 |
| CDY02713 | Canola | nucleus | 38.1 | 26.66 |
| CDY08866 | Canola | nucleus | 37.72 | 26.49 |
| CDY33492 | Canola | nucleus | 40.23 | 26.13 |
| CDY62389 | Canola | cytosol | 24.37 | 25.77 |
| CDX77711 | Canola | nucleus | 41.01 | 25.76 |
| CDY43458 | Canola | nucleus | 40.43 | 25.74 |
| CDY49937 | Canola | nucleus | 34.04 | 25.36 |
| CDY21211 | Canola | nucleus | 33.85 | 25.22 |
| CDY03177 | Canola | nucleus | 40.23 | 25.18 |
| CDY39874 | Canola | plasma membrane | 9.28 | 25.0 |
| CDY30748 | Canola | endoplasmic reticulum | 28.05 | 24.7 |
| CDX79408 | Canola | nucleus | 36.94 | 24.49 |
| CDX67929 | Canola | nucleus | 36.94 | 24.39 |
| TraesCSU01G150000.1 | Wheat | nucleus | 9.48 | 22.48 |
| CDX89416 | Canola | nucleus | 26.31 | 20.96 |
| CDX94443 | Canola | cytosol | 24.37 | 20.06 |
| TraesCSU01G244000.1 | Wheat | nucleus | 7.74 | 19.42 |
| Os06t0207966-00 | Rice | plastid | 9.67 | 19.01 |
| CDY69499 | Canola | cytosol | 8.9 | 15.13 |
| CDX89415 | Canola | cytosol, mitochondrion | 3.48 | 10.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078HWB6 | UniProt:A0A078HWB6 | EnsemblPlants:CDY42097 |
| ProteinID:CDY42097 | ProteinID:CDY42097.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00074265001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| InterPro:IPR023393 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF490 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0004EE8E73 | : | : | : |
Description
BnaA09g28630DBnaA09g28630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWB6]
Coordinates
chrLK032515:+:11398..15233
Molecular Weight (calculated)
59116.9 Da
IEP (calculated)
7.797
GRAVY (calculated)
-0.446
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFLGDSSET DKKTMKKKRF HRHTPHQIQR LESAFNECQH PDEKQRMQLS RELGLAPRQI KFWFQNRRTQ KKAQHERADN CALKEENDRI RCENIAIREA
101: LKHTICPTCG DAPSHEDSYF DEQKLRIENA HLREEFMGRP LSHLPPLLNQ MPFHSGGPSL DFDLIPGNID KSVMTNVAVT AMEELIRLTQ TNEPLWIKND
201: GARDVLNLES YENMFPRASS RGGKNHNVRV EASRSSGIVF INAITLVDML MDSDKSAELF PSVVASSKTL AVVSSGLRGN HGEALHLMLE ELQVLSPLVP
301: TREFSVLRYC QQIEHGTWAI VNVSYELPQF ISSSRPYRLP SGCLIQDMSN GYCKVTWVEH VEISEQEPIH EMFKDSVREG LAFGAERWIA TLQRMCERFT
401: ALHEPATSSV IPSPEGKRSV MKLAQRMVNN FCLSVGTSNN TRSTVVSGMN EFGIRVTSYK SHHEPNGMVL CAATSFWLPV SPLIVFNFLK DERTRPHFLF
501: FDSLNIRKKM HLMYQKI
101: LKHTICPTCG DAPSHEDSYF DEQKLRIENA HLREEFMGRP LSHLPPLLNQ MPFHSGGPSL DFDLIPGNID KSVMTNVAVT AMEELIRLTQ TNEPLWIKND
201: GARDVLNLES YENMFPRASS RGGKNHNVRV EASRSSGIVF INAITLVDML MDSDKSAELF PSVVASSKTL AVVSSGLRGN HGEALHLMLE ELQVLSPLVP
301: TREFSVLRYC QQIEHGTWAI VNVSYELPQF ISSSRPYRLP SGCLIQDMSN GYCKVTWVEH VEISEQEPIH EMFKDSVREG LAFGAERWIA TLQRMCERFT
401: ALHEPATSSV IPSPEGKRSV MKLAQRMVNN FCLSVGTSNN TRSTVVSGMN EFGIRVTSYK SHHEPNGMVL CAATSFWLPV SPLIVFNFLK DERTRPHFLF
501: FDSLNIRKKM HLMYQKI
001: MEFLGDSQNH DSSETEKKNK KKKRFHRHTP HQIQRLESTF NECQHPDEKQ RNQLSRELGL APRQIKFWFQ NRRTQKKAQH ERADNCALKE ENDKIRCENI
101: AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ
201: PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP
301: SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG
401: EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV
501: TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY
601: TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA
101: AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ
201: PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP
301: SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG
401: EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV
501: TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY
601: TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA
Arabidopsis Description
HDG12Uncharacterized protein At1g17920 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.