Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69499 | Canola | cytosol | 52.97 | 85.2 |
| CDY53691 | Canola | nucleus | 94.89 | 65.35 |
| CDX85461 | Canola | cytosol | 73.62 | 51.06 |
| CDY02713 | Canola | nucleus | 73.01 | 48.31 |
| CDY16938 | Canola | nucleus | 63.39 | 46.97 |
| AT1G34650.1 | Thale cress | nucleus | 65.44 | 45.2 |
| AT5G17320.1 | Thale cress | nucleus | 63.39 | 43.18 |
| Solyc09g057530.1.1 | Tomato | cytosol | 12.07 | 43.07 |
| Solyc09g066070.2.1 | Tomato | cytosol | 35.99 | 40.84 |
| PGSC0003DMT400085057 | Potato | cytosol | 38.65 | 39.54 |
| PGSC0003DMT400038820 | Potato | extracellular | 29.24 | 39.29 |
| PGSC0003DMT400051268 | Potato | cytosol | 40.08 | 39.28 |
| Solyc10g018030.1.1 | Tomato | cytosol | 32.31 | 38.26 |
| Solyc09g060130.1.1 | Tomato | cytosol | 34.56 | 38.06 |
| Solyc07g026560.1.1 | Tomato | cytosol | 36.61 | 37.84 |
| Solyc04g025490.1.1 | Tomato | cytosol | 18.61 | 37.6 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 27.61 | 36.68 |
| Solyc09g060170.1.1 | Tomato | cytosol | 25.77 | 36.63 |
| CDY67945 | Canola | nucleus | 50.31 | 35.7 |
| CDY43137 | Canola | nucleus | 50.1 | 35.56 |
| CDY42301 | Canola | nucleus | 50.1 | 35.51 |
| Solyc11g022420.1.1 | Tomato | cytosol | 34.76 | 35.49 |
| Solyc10g018020.1.1 | Tomato | extracellular | 24.34 | 35.42 |
| Solyc07g037910.1.1 | Tomato | cytosol | 15.13 | 35.07 |
| Solyc09g057540.2.1 | Tomato | cytosol | 35.58 | 35.01 |
| PGSC0003DMT400051266 | Potato | cytosol | 27.2 | 34.19 |
| CDY44946 | Canola | nucleus | 44.58 | 33.64 |
| CDY21211 | Canola | nucleus | 47.65 | 33.57 |
| CDY49937 | Canola | nucleus | 47.65 | 33.57 |
| Os06t0207966-00 | Rice | plastid | 18.0 | 33.46 |
| Solyc09g066050.2.1 | Tomato | cytosol | 37.22 | 32.91 |
| PGSC0003DMT400036411 | Potato | nucleus | 34.97 | 32.57 |
| Solyc08g062520.2.1 | Tomato | cytosol | 32.92 | 31.51 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 45.81 | 31.37 |
| CDX89415 | Canola | cytosol, mitochondrion | 11.04 | 30.34 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 40.49 | 29.07 |
| KRH11810 | Soybean | nucleus | 42.33 | 29.03 |
| Solyc08g062510.2.1 | Tomato | nucleus | 38.04 | 28.48 |
| KRH36827 | Soybean | nucleus | 41.1 | 28.35 |
| Solyc04g025480.1.1 | Tomato | cytosol | 37.63 | 28.09 |
| CDX96744 | Canola | nucleus | 37.63 | 27.34 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 38.24 | 27.3 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 38.24 | 27.3 |
| Zm00001d018225_P001 | Maize | nucleus | 38.45 | 27.17 |
| CDX83884 | Canola | nucleus | 38.04 | 27.15 |
| Solyc05g015030.1.1 | Tomato | cytosol | 26.18 | 27.0 |
| Zm00001d052133_P001 | Maize | nucleus | 38.24 | 26.79 |
| GSMUA_Achr10P... | Banana | nucleus | 37.22 | 26.69 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 38.04 | 26.69 |
| KRH36826 | Soybean | nucleus | 38.85 | 26.65 |
| Solyc11g011940.1.1 | Tomato | nucleus | 39.06 | 26.64 |
| Solyc09g066030.1.1 | Tomato | nucleus | 39.26 | 26.56 |
| GSMUA_Achr10P... | Banana | nucleus | 38.45 | 26.44 |
| EES05874 | Sorghum | nucleus | 38.04 | 26.31 |
| Zm00001d044973_P001 | Maize | nucleus | 36.81 | 26.12 |
| Zm00001d037140_P004 | Maize | nucleus | 36.4 | 25.91 |
| CDY26205 | Canola | nucleus | 36.4 | 25.8 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 38.85 | 25.71 |
| EER89393 | Sorghum | nucleus | 36.61 | 25.57 |
| CDY19185 | Canola | nucleus | 35.58 | 25.51 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 37.83 | 25.14 |
| CDY26204 | Canola | nucleus | 32.72 | 25.12 |
| CDX68229 | Canola | nucleus | 35.58 | 24.75 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 35.38 | 24.75 |
| CDX98703 | Canola | nucleus | 35.17 | 24.75 |
| CDY11109 | Canola | nucleus | 35.58 | 24.51 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 30.06 | 24.38 |
| CDX96471 | Canola | nucleus | 35.79 | 24.37 |
| CDY42097 | Canola | nucleus | 25.77 | 24.37 |
| CDX72984 | Canola | nucleus | 35.58 | 24.34 |
| CDX76399 | Canola | nucleus | 35.58 | 24.34 |
| CDX94054 | Canola | nucleus | 34.56 | 24.32 |
| CDY21319 | Canola | nucleus | 35.58 | 24.3 |
| CDY27417 | Canola | nucleus | 35.38 | 24.23 |
| CDX90879 | Canola | nucleus | 35.38 | 24.16 |
| KRH42429 | Soybean | cytosol | 35.79 | 23.97 |
| CDY30748 | Canola | endoplasmic reticulum | 28.43 | 23.68 |
| CDY66622 | Canola | nucleus | 34.76 | 23.26 |
| CDX94586 | Canola | nucleus | 34.76 | 23.22 |
| CDY16639 | Canola | nucleus | 34.76 | 23.19 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 34.36 | 23.17 |
| CDY06167 | Canola | nucleus | 33.74 | 22.92 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 33.95 | 22.74 |
| KRH42428 | Soybean | nucleus | 34.97 | 22.59 |
| CDY18903 | Canola | nucleus | 32.52 | 22.55 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 33.74 | 22.54 |
| CDX79091 | Canola | nucleus | 33.95 | 22.25 |
| CDX74762 | Canola | nucleus | 32.11 | 22.18 |
| CDY00515 | Canola | nucleus | 30.27 | 21.99 |
| CDY31916 | Canola | nucleus | 30.27 | 21.99 |
| CDY10041 | Canola | nucleus | 33.54 | 21.95 |
| CDY48272 | Canola | nucleus | 30.88 | 21.45 |
| CDX67855 | Canola | nucleus | 33.74 | 21.15 |
| CDY12213 | Canola | nucleus | 30.67 | 21.07 |
| CDY45684 | Canola | nucleus | 33.54 | 20.92 |
| CDY51143 | Canola | nucleus | 33.33 | 20.63 |
| CDY07201 | Canola | nucleus | 32.92 | 20.43 |
| CDX74347 | Canola | nucleus | 33.13 | 20.43 |
| CDX89416 | Canola | nucleus | 26.99 | 20.34 |
| CDX91894 | Canola | nucleus | 32.72 | 20.15 |
| CDX79408 | Canola | nucleus | 32.11 | 20.13 |
| CDY49515 | Canola | plasma membrane | 33.33 | 20.1 |
| CDX76559 | Canola | nucleus | 29.86 | 19.89 |
| CDY46842 | Canola | nucleus | 33.54 | 19.76 |
| CDX94443 | Canola | cytosol | 25.36 | 19.75 |
| CDX67929 | Canola | nucleus | 31.49 | 19.67 |
| CDY08866 | Canola | nucleus | 29.45 | 19.57 |
| CDX77711 | Canola | nucleus | 31.7 | 18.83 |
| CDY43458 | Canola | nucleus | 30.88 | 18.6 |
| CDY19129 | Canola | nucleus | 27.4 | 18.43 |
| CDY33492 | Canola | nucleus | 29.86 | 18.34 |
| CDY15339 | Canola | nucleus | 26.99 | 18.06 |
| CDY03177 | Canola | nucleus | 30.06 | 17.8 |
| CDY39874 | Canola | plasma membrane | 6.75 | 17.19 |
| CDY71572 | Canola | nucleus | 9.2 | 11.45 |
| TraesCSU01G150000.1 | Wheat | nucleus | 1.43 | 3.21 |
| TraesCSU01G244000.1 | Wheat | nucleus | 1.23 | 2.91 |
| CDY23096 | Canola | nucleus | 0.61 | 2.27 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 0.41 | 1.68 |
| Os06t0208100-00 | Rice | nucleus | 0.0 | 0.0 |
| Solyc07g026570.1.1 | Tomato | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078JCK2 | UniProt:A0A078JCK2 | EnsemblPlants:CDY62389 | ProteinID:CDY62389 |
| ProteinID:CDY62389.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00036224001 | InterPro:IPR002913 |
| InterPro:IPR023393 | PFAM:PF01852 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 | SMART:SM00234 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0004EE67F0 | SEG:seg | : |
Description
BnaCnng40190DBnaCnng40190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCK2]
Coordinates
chrLK034136:-:32263..36691
Molecular Weight (calculated)
54376.8 Da
IEP (calculated)
6.293
GRAVY (calculated)
-0.048
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKVMMTEAM VGAVTEVITL IQTEEPMWIK SSIDSRLVID QENYEKKFTK SSHFKILSAR IESSKEVAVI PLDAKNLVNM LLDTEKWANL FSTIVNKAKT
101: IHVLESSKLM YEQLHILSPL LPPREFMILR CCQQLEEDLW VIADVSYHQV AFEFEFGTPA CYKRPSGFLI QAMPNGHSKV TWMEHVEVND KVRAHRIYRD
201: LLCGGFGYGA RRWTATLERM CERLSLYSVP DFPTTDDPGV VKTINGRRRV MDLGERMLKN FAWILNMPEK SEFSQQSATN SSGVNISVRV NKEAGQPPGL
301: IVCACSSLCL PLAPLQVYNF LKNLEVRHQW DVLCHASPVT EVARFVTGAN NKNCVNILQP SSAAESGDLM IIQDSFIDAL GGMVVYAPVD LNTAHAAVSG
401: NVNPSGIPIL PSGFVISRDG RPSATAELDG GRDNCKTLLT VAFQILVTGP TISEELQMDK WTTTVDTLIS SISSTITRVK AMLNCHDGQ
101: IHVLESSKLM YEQLHILSPL LPPREFMILR CCQQLEEDLW VIADVSYHQV AFEFEFGTPA CYKRPSGFLI QAMPNGHSKV TWMEHVEVND KVRAHRIYRD
201: LLCGGFGYGA RRWTATLERM CERLSLYSVP DFPTTDDPGV VKTINGRRRV MDLGERMLKN FAWILNMPEK SEFSQQSATN SSGVNISVRV NKEAGQPPGL
301: IVCACSSLCL PLAPLQVYNF LKNLEVRHQW DVLCHASPVT EVARFVTGAN NKNCVNILQP SSAAESGDLM IIQDSFIDAL GGMVVYAPVD LNTAHAAVSG
401: NVNPSGIPIL PSGFVISRDG RPSATAELDG GRDNCKTLLT VAFQILVTGP TISEELQMDK WTTTVDTLIS SISSTITRVK AMLNCHDGQ
001: MDSSHNDSSS DEEGIDSNNR RHHSNHQVQR LEAFFHECPH PDDSQRRQLG NELNLKHKQI KFWFQNRRTQ ARIHNEKADN IALRVENMKI RCVNEAMEKA
101: LETVLCPPCG GPHGKEEQLC NLQKLRTKNV ILKTEYERLS SYLTKHGGYS IPSVDALPDL HGPSTYGSTS NNRPASYGSS SNHLPQQSSL LRRPFTRELI
201: NTTPLPKPVL LQHFQQLSQL EKNRMFEIAK NAVAEVMSLI QMEHSMWIKS TIDGRAIIDP GNYKRYFTKN SHLKSRSALQ SHHESSMEVV VVQMDARNLV
301: DMFLNTEKWA RLFPTIVTEA KTIHVLDSMD HPRQTFSRVV YEQLHILSPL VLPREFIILR TCQQMKEDLW LIADVSCYLQ NVEFESTAPI CTKRPSGVLI
401: QALPHGRSKV TWIEHVEVTD KVWPHQLYRD LLYGGFGYGA RRWTATLQRM CERLSLYSMT DFPPTDYPGV VKTIEGRRSV MSLGERMLKN FAWIMKMSDK
501: LDLPQQSGAN NSGVRISVRT NTEAGQPPGL IVCAGSSLSL PLPPLQVYDF LRNLEVRHQW DVHCQGNPVT EAARFVTGPD QKNNVTFLQP SSVGEYKLMI
601: LQDGFIDALG GMVVYAPMNL NTAYSAISGQ VDPSTIPILP SGFIISRDSH PSSSEVDGGS MTLLTLAFQI FVTGPSYYTD LNLKDSATTV NTLVSSAVQR
701: IKAMLNCE
101: LETVLCPPCG GPHGKEEQLC NLQKLRTKNV ILKTEYERLS SYLTKHGGYS IPSVDALPDL HGPSTYGSTS NNRPASYGSS SNHLPQQSSL LRRPFTRELI
201: NTTPLPKPVL LQHFQQLSQL EKNRMFEIAK NAVAEVMSLI QMEHSMWIKS TIDGRAIIDP GNYKRYFTKN SHLKSRSALQ SHHESSMEVV VVQMDARNLV
301: DMFLNTEKWA RLFPTIVTEA KTIHVLDSMD HPRQTFSRVV YEQLHILSPL VLPREFIILR TCQQMKEDLW LIADVSCYLQ NVEFESTAPI CTKRPSGVLI
401: QALPHGRSKV TWIEHVEVTD KVWPHQLYRD LLYGGFGYGA RRWTATLQRM CERLSLYSMT DFPPTDYPGV VKTIEGRRSV MSLGERMLKN FAWIMKMSDK
501: LDLPQQSGAN NSGVRISVRT NTEAGQPPGL IVCAGSSLSL PLPPLQVYDF LRNLEVRHQW DVHCQGNPVT EAARFVTGPD QKNNVTFLQP SSVGEYKLMI
601: LQDGFIDALG GMVVYAPMNL NTAYSAISGQ VDPSTIPILP SGFIISRDSH PSSSEVDGGS MTLLTLAFQI FVTGPSYYTD LNLKDSATTV NTLVSSAVQR
701: IKAMLNCE
Arabidopsis Description
HDG10Homeobox-leucine zipper protein HDG10 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Z0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.