Factsheet for Solyc09g066030.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g066070.2.1	Tomato	cytosol	52.28	87.7
Solyc09g057530.1.1	Tomato	cytosol	16.32	86.13
Solyc11g022420.1.1	Tomato	cytosol	55.05	83.09
Solyc08g062520.2.1	Tomato	cytosol	57.81	81.8
Solyc08g062510.2.1	Tomato	nucleus	73.44	81.32
Solyc11g022410.1.1	Tomato	extracellular	8.3	81.08
Solyc09g060130.1.1	Tomato	cytosol	49.79	81.08
Solyc05g015030.1.1	Tomato	cytosol	53.11	81.01
Solyc09g057540.2.1	Tomato	cytosol	55.05	80.08
Solyc09g060170.1.1	Tomato	cytosol	38.04	79.94
Solyc09g060140.2.1	Tomato	mitochondrion	39.97	78.53
Solyc11g011940.1.1	Tomato	nucleus	74.97	75.59
Solyc09g066050.2.1	Tomato	cytosol	56.71	74.14
Solyc11g022430.1.1	Tomato	cytosol	16.46	66.48
Solyc10g018030.1.1	Tomato	cytosol	36.93	64.65
Solyc07g026560.1.1	Tomato	cytosol	40.39	61.73
Solyc10g018020.1.1	Tomato	extracellular	28.63	61.61
Solyc04g025490.1.1	Tomato	cytosol	19.36	57.85
Solyc07g037910.1.1	Tomato	cytosol	16.46	56.4
Solyc04g025480.1.1	Tomato	cytosol	50.21	55.42
Solyc10g018000.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus	53.53	55.36
Os06t0208100-00	Rice	nucleus	9.54	53.49
Solyc07g026570.1.1	Tomato	nucleus	8.58	43.97
Solyc04g025740.1.1	Tomato	nucleus	8.99	43.92
VIT_04s0079g00480.t01	Wine grape	nucleus	41.36	41.88
KRH36827	Soybean	nucleus	38.73	39.49
CDY62389	Canola	cytosol	26.56	39.26
KRH11810	Soybean	nucleus	38.45	38.99
CDY69499	Canola	cytosol	16.32	38.82
AT3G03260.1	Thale cress	nucleus	36.65	37.91
CDY53691	Canola	nucleus	36.93	37.61
Bra003213.1-P	Field mustard	nucleus	36.93	37.61
Bra008562.1-P	Field mustard	cytosol, nucleus, plastid	37.07	37.07
CDX85461	Canola	cytosol	36.1	37.02
Bra023611.1-P	Field mustard	nucleus	36.1	37.02
KRH36826	Soybean	nucleus	36.24	36.75
GSMUA_Achr10P...	Banana	nucleus	36.1	36.71
TraesCS6D01G304300.1	Wheat	nucleus	34.58	36.5
GSMUA_Achr6P05990_001	Banana	nucleus	30.43	36.48
TraesCS6A01G324500.1	Wheat	nucleus	34.44	36.35
Zm00001d018225_P001	Maize	nucleus	34.44	35.98
Solyc03g098200.2.1	Tomato	nucleus	35.82	35.92
TraesCS6B01G354900.3	Wheat	nucleus	34.58	35.87
CDY16938	Canola	nucleus	32.64	35.76
EER89393	Sorghum	nucleus	34.58	35.71
Zm00001d044973_P001	Maize	nucleus	34.02	35.7
CDY42301	Canola	nucleus	34.02	35.65
Bra020066.1-P	Field mustard	nucleus	33.61	35.63
Zm00001d052133_P001	Maize	nucleus	34.3	35.53
Zm00001d037140_P004	Maize	nucleus	33.75	35.52
Solyc06g072310.2.1	Tomato	nucleus	34.99	35.29
Bra032003.1-P	Field mustard	nucleus	33.47	35.12
GSMUA_Achr7P11310_001	Banana	nucleus	35.68	35.05
CDY02713	Canola	nucleus	35.82	35.05
GSMUA_Achr10P...	Banana	nucleus	33.06	35.04
CDY49937	Canola	nucleus	33.61	35.01
CDY43137	Canola	nucleus	33.33	34.98
CDY21211	Canola	nucleus	33.47	34.87
EES05874	Sorghum	nucleus	34.02	34.79
CDY44946	Canola	nucleus	31.12	34.72
CDY67945	Canola	nucleus	33.06	34.69
GSMUA_Achr2P15140_001	Banana	nucleus	35.41	34.64
AT1G34650.1	Thale cress	nucleus	33.75	34.46
Bra021363.1-P	Field mustard	nucleus	34.58	34.39
AT5G17320.1	Thale cress	nucleus	33.2	33.43
TraesCS7A01G167900.1	Wheat	nucleus	33.2	33.1
TraesCS7D01G168700.1	Wheat	nucleus	33.33	32.92
TraesCS7B01G072700.1	Wheat	nucleus	33.2	32.88
Solyc10g005330.2.1	Tomato	nucleus	31.81	32.3
Solyc03g031760.2.1	Tomato	cytosol	26.97	31.0
Os06t0207966-00	Rice	plastid	11.2	30.8
Solyc02g080260.2.1	Tomato	nucleus	31.81	30.63
Solyc12g005830.1.1	Tomato	nucleus	30.84	29.69
KRH42428	Soybean	nucleus	30.57	29.19
Solyc01g091630.2.1	Tomato	nucleus	33.06	29.11
Solyc07g041850.1.1	Tomato	nucleus	26.28	27.94
Solyc03g120620.2.1	Tomato	nucleus	29.74	27.74
Solyc08g076370.2.1	Tomato	nucleus	32.23	27.67
Solyc06g050160.2.1	Tomato	nucleus	24.76	27.41
KRH42429	Soybean	cytosol	27.66	27.4
Solyc06g035940.2.1	Tomato	nucleus	25.45	27.22
Solyc03g026070.2.1	Tomato	nucleus	29.18	26.15
Solyc10g006420.2.1	Tomato	cytosol	18.67	25.62

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	Gene3D:3.30.530.20	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:IPR002913	InterPro:IPR023393	UniProt:K4CUM9	PFAM:PF00046	PFAM:PF01852	ScanProsite:PS00027
PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF504	SMART:SM00234	SMART:SM00389
SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	EnsemblPlantsGene:Solyc09g066030.1	EnsemblPlants:Solyc09g066030.1.1
UniParc:UPI000276CB46	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr9:+:64315602..64326227

Molecular Weight (calculated)

82711.4 Da

IEP (calculated)

6.818

GRAVY (calculated)

-0.515

Length

723 amino acids

Sequence
(BLAST)

001: MSDSGKEPIG ELSNSQKRSK RQSQYHRHSM EQIQRLEAFF NKCPHPDEDQ QKQLAREAGL DHKQVKFWFQ NKRTQTKTQN ERSINNALRK EKERLLSENK
101: AMKEAMKNIM CPQCDGPPIG KEERERNIEN MKTENQWLTE QCEKVSNLIS SVVGRPFVMD SNLAPPKLTL GSSSNSSDEN LLNQNICGYP IRYPALCHEN
201: NQNNNNVQAH SININNIPAM SSSPQEHDEF HHDSRQQTIM FETIVASMNE MVELWKTNDP FWVDPSSDEK FSIHRESYGR KYSNQVLPYE TSTTRIESSK
301: DCGIVSMTAV ELIHNFLDPV KWMNLFPTIV TKARTIEVLD SGTWGGSIQL MYEKLHILSP LVEAREFFFI RCCRQLDATT WIMVDVSYDI FNEIQSGAPC
401: YSWKFPSGCV IQDMGNGQSK VTWVEHVQIF EKYQVNRIFR DLLCGREAYG AKRWIVTLQR MSERNSFSMG TTYPTTHDFK GVFHDPKGIK NTIKVSQRMV
501: KSFFEILSMA DKLDFPTSSQ PNRGDRISIR KNEEITQPKG FIAIATTSLW LPRSFQDVFN FFEDDKTRNQ WDILTGENNV IELDRVLTGT FPANNITIIQ
601: PYNMYKEMLV LEEKSINEMG AFLVYAPIEL RVITSIVNGC DATKVPILPS GIIISPDGRL SSNRYNTANA QNGSILTVVF QILICDNNNP TSKQQQMETV
701: ASVHGVLSAT ILKIKEALGC SDL

Best Arabidopsis Sequence Match ( AT3G03260.1 )
(BLAST)

001: MDNNGGGSSG NEQYTSGDAK QNGKRTCHRH TPQQIQRLEA YFKECPHPDE RQRNQLCREL KLEPDQIKFW FQNKRTQSKT QEDRSTNVLL RGENETLQSD
101: NEAMLDALKS VLCPACGGPP FGREERGHNL QKLRFENARL KDHRDRISNF VDQHKPNEPT VEDSLAYVPS LDRISYGING GNMYEPSSSY GPPNFQIIQP
201: RPLAETDMSL LSEIAASAVE ELKRLFLAEE QFWVKSCIDE TYVIDTESYE RFSHAVKHFS STTAHVESSK AVTVVHVEAI NLIQMFLDPE KWKELFPTIV
301: NKANTIHVLG SGLPIRGNCN VLQVMWEQLH ILSPLVPARE FMVVRCCQEI EKGIWIIADV SHRANFDFGN AACYKRPSGC LIQALPDAHS KVMWIEHVEV
401: DHKLDTHKIY RDLLSGGSGY GAKRWIVTLE RMCERMALSS IQTLPPSDRS EVITTGEARR SVMKLGERMV KNFNEMLTMS GKIDFPQQSK NGVRVSIRMN
501: IEAGQPPGIV VSASSSLAIP LTPLQVFAFL QNLDTRQQWD ILSYGTVVNE IARIVTGSSE TNCVTILRVH PTHEENNDKM VVQDSCKDDM LMLQDCYMDA
601: LGGMIVYAPM DMATMHFAVS GEVDPSHIPI LPSGFVISSD GRRSTVEDGG TLLTVAFQIL VSGKANRSRE VNEKSVDTVS ALISSTIQRI KGLLNCPEC

Arabidopsis Description

HDG8Homeobox-leucine zipper protein HDG8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.