Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G34650.1 | Thale cress | nucleus | 67.69 | 68.64 |
| CDY62389 | Canola | cytosol | 43.18 | 63.39 |
| CDY69499 | Canola | cytosol | 26.6 | 62.83 |
| CDX85461 | Canola | cytosol | 60.45 | 61.56 |
| Bra023611.1-P | Field mustard | nucleus | 60.31 | 61.42 |
| CDY53691 | Canola | nucleus | 59.75 | 60.42 |
| Bra003213.1-P | Field mustard | nucleus | 59.61 | 60.28 |
| Bra008562.1-P | Field mustard | cytosol, nucleus, plastid | 60.31 | 59.89 |
| Os06t0208100-00 | Rice | nucleus | 10.59 | 58.91 |
| CDY02713 | Canola | nucleus | 60.45 | 58.73 |
| CDY16938 | Canola | nucleus | 51.53 | 56.06 |
| AT3G03260.1 | Thale cress | nucleus | 47.91 | 49.21 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 41.64 | 41.88 |
| Zm00001d018225_P001 | Maize | nucleus | 38.72 | 40.17 |
| Solyc09g057530.1.1 | Tomato | cytosol | 7.66 | 40.15 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 33.7 | 40.13 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 37.88 | 39.71 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 37.88 | 39.71 |
| Zm00001d052133_P001 | Maize | nucleus | 38.3 | 39.4 |
| GSMUA_Achr10P... | Banana | nucleus | 39.0 | 39.38 |
| KRH11810 | Soybean | nucleus | 39.0 | 39.27 |
| Zm00001d037140_P004 | Maize | nucleus | 37.47 | 39.16 |
| Zm00001d044973_P001 | Maize | nucleus | 37.33 | 38.9 |
| EES05874 | Sorghum | nucleus | 38.3 | 38.9 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 37.74 | 38.88 |
| EER89393 | Sorghum | nucleus | 37.74 | 38.71 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 39.69 | 38.57 |
| KRH36827 | Soybean | nucleus | 38.02 | 38.5 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 39.28 | 38.32 |
| Solyc09g066070.2.1 | Tomato | cytosol | 22.84 | 38.05 |
| GSMUA_Achr10P... | Banana | nucleus | 36.07 | 37.98 |
| AT1G17920.1 | Thale cress | nucleus | 35.79 | 37.41 |
| Os06t0207966-00 | Rice | plastid | 13.51 | 36.88 |
| Solyc09g057540.2.1 | Tomato | cytosol | 25.49 | 36.82 |
| PGSC0003DMT400038820 | Potato | extracellular | 18.66 | 36.81 |
| PGSC0003DMT400085057 | Potato | cytosol | 24.23 | 36.4 |
| AT1G73360.1 | Thale cress | nucleus | 36.49 | 36.29 |
| PGSC0003DMT400051268 | Potato | cytosol | 25.21 | 36.27 |
| Solyc10g018030.1.1 | Tomato | cytosol | 20.75 | 36.08 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 34.12 | 35.98 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 18.38 | 35.87 |
| Solyc09g060130.1.1 | Tomato | cytosol | 22.14 | 35.81 |
| Solyc11g011940.1.1 | Tomato | nucleus | 35.38 | 35.43 |
| Solyc11g022420.1.1 | Tomato | cytosol | 23.4 | 35.07 |
| Solyc07g026560.1.1 | Tomato | cytosol | 22.98 | 34.88 |
| KRH36826 | Soybean | nucleus | 34.4 | 34.64 |
| Solyc09g066050.2.1 | Tomato | cytosol | 26.32 | 34.18 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 34.12 | 33.79 |
| Solyc05g015030.1.1 | Tomato | cytosol | 22.28 | 33.76 |
| Solyc08g062510.2.1 | Tomato | nucleus | 30.64 | 33.69 |
| AT1G05230.5 | Thale cress | nucleus | 33.57 | 33.43 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 33.98 | 33.33 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 33.84 | 33.29 |
| AT4G04890.1 | Thale cress | nucleus | 34.4 | 33.24 |
| Solyc09g066030.1.1 | Tomato | nucleus | 33.43 | 33.2 |
| Solyc09g060170.1.1 | Tomato | cytosol | 15.88 | 33.14 |
| Solyc10g018020.1.1 | Tomato | extracellular | 15.46 | 33.04 |
| AT4G21750.3 | Thale cress | nucleus | 34.82 | 32.81 |
| PGSC0003DMT400051266 | Potato | cytosol | 17.55 | 32.39 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 31.2 | 32.05 |
| Solyc04g025490.1.1 | Tomato | cytosol | 10.72 | 31.82 |
| Solyc07g037910.1.1 | Tomato | cytosol | 9.33 | 31.75 |
| PGSC0003DMT400036411 | Potato | nucleus | 23.12 | 31.62 |
| Solyc08g062520.2.1 | Tomato | cytosol | 22.14 | 31.12 |
| Solyc04g025480.1.1 | Tomato | cytosol | 28.13 | 30.84 |
| Solyc07g026570.1.1 | Tomato | nucleus | 5.99 | 30.5 |
| AT5G52170.2 | Thale cress | nucleus | 29.11 | 30.42 |
| AT4G00730.1 | Thale cress | nucleus | 33.84 | 30.3 |
| KRH42428 | Soybean | nucleus | 31.62 | 29.99 |
| AT2G32370.1 | Thale cress | nucleus | 30.22 | 29.93 |
| AT3G61150.1 | Thale cress | nucleus | 33.29 | 29.58 |
| AT4G25530.1 | Thale cress | nucleus | 26.88 | 28.13 |
| AT1G79840.2 | Thale cress | nucleus, plastid | 30.08 | 27.84 |
| KRH42429 | Soybean | cytosol | 27.16 | 26.71 |
| AT4G17710.1 | Thale cress | nucleus | 25.77 | 26.09 |
| AT5G46880.3 | Thale cress | nucleus | 29.67 | 25.79 |
| TraesCSU01G150000.1 | Wheat | nucleus | 6.82 | 22.48 |
| AT5G07260.1 | Thale cress | cytosol | 15.88 | 21.07 |
| TraesCSU01G244000.1 | Wheat | nucleus | 5.57 | 19.42 |
| AT4G26920.1 | Thale cress | cytosol, plasma membrane, plastid | 11.56 | 18.0 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 2.51 | 15.13 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | EntrezGene:831598 | ProteinID:AED92413.1 | ArrayExpress:AT5G17320 |
| EnsemblPlantsGene:AT5G17320 | RefSeq:AT5G17320 | TAIR:AT5G17320 | RefSeq:AT5G17320-TAIR-G | EnsemblPlants:AT5G17320.1 | TAIR:AT5G17320.1 |
| ProteinID:BAB10519.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | Symbol:HDG9 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | InterPro:IPR023393 | RefSeq:NP_197234.1 | PFAM:PF00046 | PFAM:PF01852 | PO:PO:0009066 |
| PO:PO:0009071 | PO:PO:0025074 | PO:PO:0025281 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF504 | UniProt:Q9FFI0 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI000009D307 | SEG:seg | : | : |
Description
HDG9Homeobox-leucine zipper protein HDG9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFI0]
Coordinates
chr5:-:5703139..5707637
Molecular Weight (calculated)
81072.6 Da
IEP (calculated)
7.626
GRAVY (calculated)
-0.505
Length
718 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFTRDDNSS DERENDVDAN TNNRHEKKGY HRHTNEQIHR LETYFKECPH PDEFQRRLLG EELNLKPKQI KFWFQNKRTQ AKSHNEKADN AALRAENIKI
101: RRENESMEDA LNNVVCPPCG GRGPGREDQL RHLQKLRAQN AYLKDEYERV SNYLKQYGGH SMHNVEATPY LHGPSNHAST SKNRPALYGT SSNRLPEPSS
201: IFRGPYTRGN MNTTAPPQPR KPLEMQNFQP LSQLEKIAML EAAEKAVSEV LSLIQMDDTM WKKSSIDDRL VIDPGLYEKY FTKTNTNGRP ESSKDVVVVQ
301: MDAGNLIDIF LTAEKWARLF PTIVNEAKTI HVLDSVDHRG KTFSRVIYEQ LHILSPLVPP REFMILRTCQ QIEDNVWMIA DVSCHLPNIE FDLSFPICTK
401: RPSGVLIQAL PHGFSKVTWI EHVVVNDNRV RPHKLYRDLL YGGFGYGARR WTVTLERTCE RLIFSTSVPA LPNNDNPGVV QTIRGRNSVM HLGERMLRNF
501: AWMMKMVNKL DFSPQSETNN SGIRIGVRIN NEAGQPPGLI VCAGSSLSLP LPPVQVYDFL KNLEVRHQWD VLCHGNPATE AARFVTGSNP RNTVSFLEPS
601: IRDINTKLMI LQDSFKDALG GMVAYAPMDL NTACAAISGD IDPTTIPILP SGFMISRDGR PSEGEAEGGS YTLLTVAFQI LVSGPSYSPD TNLEVSATTV
701: NTLISSTVQR IKAMLKCE
101: RRENESMEDA LNNVVCPPCG GRGPGREDQL RHLQKLRAQN AYLKDEYERV SNYLKQYGGH SMHNVEATPY LHGPSNHAST SKNRPALYGT SSNRLPEPSS
201: IFRGPYTRGN MNTTAPPQPR KPLEMQNFQP LSQLEKIAML EAAEKAVSEV LSLIQMDDTM WKKSSIDDRL VIDPGLYEKY FTKTNTNGRP ESSKDVVVVQ
301: MDAGNLIDIF LTAEKWARLF PTIVNEAKTI HVLDSVDHRG KTFSRVIYEQ LHILSPLVPP REFMILRTCQ QIEDNVWMIA DVSCHLPNIE FDLSFPICTK
401: RPSGVLIQAL PHGFSKVTWI EHVVVNDNRV RPHKLYRDLL YGGFGYGARR WTVTLERTCE RLIFSTSVPA LPNNDNPGVV QTIRGRNSVM HLGERMLRNF
501: AWMMKMVNKL DFSPQSETNN SGIRIGVRIN NEAGQPPGLI VCAGSSLSLP LPPVQVYDFL KNLEVRHQWD VLCHGNPATE AARFVTGSNP RNTVSFLEPS
601: IRDINTKLMI LQDSFKDALG GMVAYAPMDL NTACAAISGD IDPTTIPILP SGFMISRDGR PSEGEAEGGS YTLLTVAFQI LVSGPSYSPD TNLEVSATTV
701: NTLISSTVQR IKAMLKCE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.