Factsheet for AT1G73360.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68229	Canola	nucleus	83.8	86.06
Bra003846.1-P	Field mustard	nucleus	83.66	85.67
CDX96471	Canola	nucleus	85.18	85.65
Bra015996.1-P	Field mustard	nucleus	85.04	85.63
CDX72984	Canola	nucleus	84.49	85.31
CDY11109	Canola	nucleus	83.38	84.79
Os06t0208100-00	Rice	nucleus	13.99	78.29
AT1G17920.1	Thale cress	nucleus	70.91	74.53
VIT_17s0053g00780.t01	Wine grape	nucleus	66.62	67.75
KRH09477	Soybean	nucleus	66.76	67.13
KRH38939	Soybean	nucleus	66.48	66.48
Solyc03g098200.2.1	Tomato	nucleus	63.85	63.94
KRH60596	Soybean	nucleus	62.47	63.25
PGSC0003DMT400069312	Potato	nucleus	62.6	63.22
KRH41898	Soybean	nucleus	62.88	62.97
Solyc06g072310.2.1	Tomato	nucleus	61.91	62.34
GSMUA_Achr10P...	Banana	nucleus	56.93	57.81
TraesCS6D01G304300.1	Wheat	nucleus	53.74	56.64
Zm00001d018225_P001	Maize	nucleus	54.16	56.5
TraesCS6A01G324500.1	Wheat	nucleus	53.6	56.5
Zm00001d052133_P001	Maize	nucleus	54.43	56.3
EES05874	Sorghum	nucleus	54.71	55.87
GSMUA_Achr6P05990_001	Banana	nucleus	46.54	55.72
TraesCS6B01G354900.3	Wheat	nucleus	53.6	55.52
GSMUA_Achr2P15140_001	Banana	nucleus	56.65	55.35
Os06t0207966-00	Rice	plastid	19.81	54.37
Zm00001d044973_P001	Maize	nucleus	51.8	54.28
GSMUA_Achr7P11310_001	Banana	nucleus	55.26	54.21
Zm00001d037140_P004	Maize	nucleus	51.52	54.15
EER89393	Sorghum	nucleus	52.22	53.86
GSMUA_Achr10P...	Banana	nucleus	50.69	53.67
TraesCS7A01G167900.1	Wheat	nucleus	46.4	46.21
TraesCS7B01G072700.1	Wheat	nucleus	46.68	46.16
AT1G05230.5	Thale cress	nucleus	45.98	46.05
TraesCS7D01G168700.1	Wheat	nucleus	46.54	45.9
AT4G04890.1	Thale cress	nucleus	46.95	45.63
AT4G21750.3	Thale cress	nucleus	46.81	44.36
AT5G52170.2	Thale cress	nucleus	39.47	41.48
AT4G00730.1	Thale cress	nucleus	44.88	40.4
AT3G61150.1	Thale cress	nucleus	43.21	38.61
AT5G46880.3	Thale cress	nucleus	44.04	38.5
AT4G17710.1	Thale cress	nucleus	37.53	38.22
AT3G03260.1	Thale cress	nucleus	36.84	38.05
AT2G32370.1	Thale cress	nucleus	37.67	37.52
AT5G17320.1	Thale cress	nucleus	36.29	36.49
AT1G34650.1	Thale cress	nucleus	34.76	35.45
AT1G79840.2	Thale cress	nucleus, plastid	36.84	34.28
AT4G25530.1	Thale cress	nucleus	31.44	33.09
Bra007562.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	11.91	30.07
AT5G07260.1	Thale cress	cytosol	20.78	27.73
TraesCSU01G150000.1	Wheat	nucleus	8.03	26.61
TraesCSU01G244000.1	Wheat	nucleus	6.65	23.3
AT4G26920.1	Thale cress	cytosol, plasma membrane, plastid	14.27	22.34

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	Gene3D:3.30.530.20	EntrezGene:843671	ProteinID:AAG30978.1	ProteinID:AEE35449.1
ArrayExpress:AT1G73360	EnsemblPlantsGene:AT1G73360	RefSeq:AT1G73360	TAIR:AT1G73360	RefSeq:AT1G73360-TAIR-G	EnsemblPlants:AT1G73360.1
TAIR:AT1G73360.1	EMBL:BT003979	EMBL:BT004915	ncoils:Coil	GO:GO:0000976	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009653	GO:GO:0009828
GO:GO:0009987	GO:GO:0010091	GO:GO:0016043	GO:GO:0030154	GO:GO:0043565	Symbol:HDG11
InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393
RefSeq:NP_177479.1	PFAM:PF00046	PFAM:PF01852	PO:PO:0000013	PO:PO:0000017	PO:PO:0000027
PO:PO:0000037	PO:PO:0000056	PO:PO:0000230	PO:PO:0000282	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007098
PO:PO:0007115	PO:PO:0007131	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009001
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0009073	PO:PO:0020003	PO:PO:0020020	PO:PO:0020030	PO:PO:0020041	PO:PO:0020100
PO:PO:0020148	PO:PO:0025022	ScanProsite:PS00027	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326
PANTHER:PTHR24326:SF236	UniProt:Q9FX31	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961
InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI000000C215	SEG:seg	:	:

Description

HDG11Homeobox-leucine zipper protein HDG11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX31]

Coordinates

chr1:-:27578421..27582685

Molecular Weight (calculated)

79124.7 Da

IEP (calculated)

6.687

GRAVY (calculated)

-0.350

Length

722 amino acids

Sequence
(BLAST)

001: MSFVVGVGGS GSGSGGDGGG SHHHDGSETD RKKKRYHRHT AQQIQRLESS FKECPHPDEK QRNQLSRELG LAPRQIKFWF QNRRTQLKAQ HERADNSALK
101: AENDKIRCEN IAIREALKHA ICPNCGGPPV SEDPYFDEQK LRIENAHLRE ELERMSTIAS KYMGRPISQL STLHPMHISP LDLSMTSLTG CGPFGHGPSL
201: DFDLLPGSSM AVGPNNNLQS QPNLAISDMD KPIMTGIALT AMEELLRLLQ TNEPLWTRTD GCRDILNLGS YENVFPRSSN RGKNQNFRVE ASRSSGIVFM
301: NAMALVDMFM DCVKWTELFP SIIAASKTLA VISSGMGGTH EGALHLLYEE MEVLSPLVAT REFCELRYCQ QTEQGSWIVV NVSYDLPQFV SHSQSYRFPS
401: GCLIQDMPNG YSKVTWVEHI ETEEKELVHE LYREIIHRGI AFGADRWVTT LQRMCERFAS LSVPASSSRD LGGVILSPEG KRSMMRLAQR MISNYCLSVS
501: RSNNTRSTVV SELNEVGIRV TAHKSPEPNG TVLCAATTFW LPNSPQNVFN FLKDERTRPQ WDVLSNGNAV QEVAHISNGS HPGNCISVLR GSNATHSNNM
601: LILQESSTDS SGAFVVYSPV DLAALNIAMS GEDPSYIPLL SSGFTISPDG NGSNSEQGGA STSSGRASAS GSLITVGFQI MVSNLPTAKL NMESVETVNN
701: LIGTTVHQIK TALSGPTAST TA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.