Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09477 | Soybean | nucleus | 97.51 | 98.05 |
| Os06t0208100-00 | Rice | nucleus | 15.1 | 84.5 |
| VIT_17s0053g00780.t01 | Wine grape | nucleus | 80.89 | 82.25 |
| KRH60596 | Soybean | nucleus | 81.02 | 82.05 |
| KRH41898 | Soybean | nucleus | 80.61 | 80.72 |
| Solyc03g098200.2.1 | Tomato | nucleus | 74.24 | 74.34 |
| PGSC0003DMT400069312 | Potato | nucleus | 72.16 | 72.87 |
| Solyc06g072310.2.1 | Tomato | nucleus | 71.75 | 72.25 |
| GSMUA_Achr10P... | Banana | nucleus | 66.2 | 67.23 |
| CDX96744 | Canola | nucleus | 62.33 | 66.86 |
| AT1G17920.1 | Thale cress | nucleus | 63.43 | 66.67 |
| AT1G73360.1 | Thale cress | nucleus | 66.48 | 66.48 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 63.02 | 66.42 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 63.02 | 66.42 |
| Zm00001d018225_P001 | Maize | nucleus | 63.43 | 66.19 |
| Zm00001d052133_P001 | Maize | nucleus | 63.85 | 66.05 |
| CDX96471 | Canola | nucleus | 65.51 | 65.88 |
| Bra015996.1-P | Field mustard | nucleus | 65.37 | 65.83 |
| CDX72984 | Canola | nucleus | 65.1 | 65.73 |
| EES05874 | Sorghum | nucleus | 64.27 | 65.63 |
| CDX68229 | Canola | nucleus | 63.85 | 65.58 |
| Bra016578.1-P | Field mustard | nucleus | 61.91 | 65.35 |
| CDX83884 | Canola | nucleus | 61.91 | 65.26 |
| Os06t0207966-00 | Rice | plastid | 23.68 | 65.02 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 62.74 | 64.99 |
| CDY26204 | Canola | nucleus | 57.34 | 64.99 |
| Bra003846.1-P | Field mustard | nucleus | 63.43 | 64.96 |
| CDY19185 | Canola | nucleus | 60.94 | 64.52 |
| CDY11109 | Canola | nucleus | 63.43 | 64.51 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 65.37 | 63.87 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 53.05 | 63.52 |
| CDY26205 | Canola | nucleus | 60.66 | 63.48 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 64.54 | 63.32 |
| Bra025938.1-P | Field mustard | nucleus | 60.8 | 63.26 |
| Zm00001d037140_P004 | Maize | nucleus | 59.83 | 62.88 |
| Zm00001d044973_P001 | Maize | nucleus | 59.97 | 62.84 |
| EER89393 | Sorghum | nucleus | 60.25 | 62.14 |
| CDY42097 | Canola | nucleus | 44.46 | 62.09 |
| GSMUA_Achr10P... | Banana | nucleus | 56.79 | 60.12 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 53.46 | 53.24 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 53.74 | 53.15 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 53.74 | 53.01 |
| KRH13175 | Soybean | cytosol | 12.6 | 51.41 |
| KRH56105 | Soybean | nucleus | 50.14 | 49.66 |
| KRH77881 | Soybean | nucleus | 49.31 | 48.7 |
| KRH27601 | Soybean | nucleus | 48.62 | 47.95 |
| KRH25398 | Soybean | plastid | 50.28 | 47.7 |
| KRH74360 | Soybean | nucleus | 51.94 | 47.53 |
| KRH26803 | Soybean | nucleus | 50.42 | 46.61 |
| KRH22554 | Soybean | nucleus | 50.42 | 46.61 |
| KRH39579 | Soybean | nucleus | 51.52 | 46.5 |
| KRH36827 | Soybean | nucleus | 45.57 | 46.4 |
| KRH11810 | Soybean | nucleus | 45.71 | 46.28 |
| KRH40539 | Soybean | nucleus | 51.11 | 45.0 |
| KRH00641 | Soybean | nucleus | 50.55 | 44.4 |
| KRH48236 | Soybean | nucleus | 50.97 | 44.39 |
| KRG91238 | Soybean | nucleus | 44.6 | 44.05 |
| KRH65144 | Soybean | nucleus | 50.83 | 43.9 |
| KRH35356 | Soybean | nucleus | 45.98 | 43.4 |
| KRG91457 | Soybean | nucleus | 46.4 | 43.11 |
| KRH38560 | Soybean | nucleus | 43.77 | 40.72 |
| KRH35579 | Soybean | nucleus | 43.63 | 40.49 |
| KRH09109 | Soybean | plastid | 42.38 | 39.48 |
| KRH36826 | Soybean | nucleus | 38.64 | 39.13 |
| KRH47277 | Soybean | nucleus | 39.75 | 38.22 |
| KRH44348 | Soybean | nucleus | 39.34 | 37.97 |
| KRH09884 | Soybean | plastid | 39.47 | 37.95 |
| KRH23432 | Soybean | plastid | 40.03 | 37.93 |
| KRH42428 | Soybean | nucleus | 38.64 | 36.86 |
| KRH42429 | Soybean | cytosol | 32.83 | 32.47 |
| KRH22254 | Soybean | cytosol | 23.55 | 31.78 |
| TraesCSU01G150000.1 | Wheat | nucleus | 8.59 | 28.44 |
| Bra007562.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 11.08 | 27.97 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 12.47 | 27.27 |
| TraesCSU01G244000.1 | Wheat | nucleus | 7.2 | 25.24 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100809075 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | EMBL:ACUP02005899 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_09G168000 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_dom | UniProt:I1L3Y5 | InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 |
| EnsemblPlants:KRH38939 | ProteinID:KRH38939 | ProteinID:KRH38939.1 | ProteinID:KRH38940.1 | PFAM:PF00046 | PFAM:PF01852 |
| ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF236 | SMART:SM00234 |
| SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI00023C9027 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:39235626..39240401
Molecular Weight (calculated)
79555.1 Da
IEP (calculated)
6.702
GRAVY (calculated)
-0.309
Length
722 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFGSGSPGD HHHHHDGSSD SQRRKKRYHR HTANQIQRLE SMFKECPHPD EKQRLQLSRE LGLAPRQIKF WFQNRRTQMK AQHERADNCA LRAENDKIRC
101: ENIAIREALK NVICPSCGGP PMNDDCYFDE QKLRLENAQL KEELDRVSSI AAKYIGRPIS QLPPVQPIHI SSLDLSMGTF ASQGLGGPSL DLDLLPGSSS
201: SPMLNVPPFQ PACLSDMDKS LMSDIASNAM EEMIRLLQTN EPLWMKGADG RDVLDLDSYE RMFPKANSHL KNPNVHVEAS RDSGVVIMNG LTLVDMFMDP
301: NKWMELFPTI VTMARTIEVI SSGMMGSHSG SLQLMYEELQ VLSPLVSTRE FYFLRYCQQI EQGLWAIVDV SYDFPQDNQF APQYRSHRLP SGVFIQDMPN
401: GYSKVTWIEH VEIEDKTPVH RLYRNLIYSG IAFGAQRWLT TLQRMCERIA CLMVTGNSTR DLGGVIPSPE GKRSMMKLAQ RMVTNFCASI SASAGHRWTT
501: LSGSGMNEIG VRVTVHKSSD PGQPNGVVLS AATTIWLPIP PQTVFNFFKD EKKRPQWDVL SNGNAVQEVA HIANGPHPGN CISVLRAFNS SQNNMLILQE
601: SCVDSSGSLV VYCPVDLPAI NIAMSGEDPS YIPLLPSGFT ISPDGQADQD GGGASTSTST GSRVMGGGSG PGSGGSLITV AFQILVSSLP SAKLNMESVT
701: TVNSLIGNTV QHIKAALNCP SS
101: ENIAIREALK NVICPSCGGP PMNDDCYFDE QKLRLENAQL KEELDRVSSI AAKYIGRPIS QLPPVQPIHI SSLDLSMGTF ASQGLGGPSL DLDLLPGSSS
201: SPMLNVPPFQ PACLSDMDKS LMSDIASNAM EEMIRLLQTN EPLWMKGADG RDVLDLDSYE RMFPKANSHL KNPNVHVEAS RDSGVVIMNG LTLVDMFMDP
301: NKWMELFPTI VTMARTIEVI SSGMMGSHSG SLQLMYEELQ VLSPLVSTRE FYFLRYCQQI EQGLWAIVDV SYDFPQDNQF APQYRSHRLP SGVFIQDMPN
401: GYSKVTWIEH VEIEDKTPVH RLYRNLIYSG IAFGAQRWLT TLQRMCERIA CLMVTGNSTR DLGGVIPSPE GKRSMMKLAQ RMVTNFCASI SASAGHRWTT
501: LSGSGMNEIG VRVTVHKSSD PGQPNGVVLS AATTIWLPIP PQTVFNFFKD EKKRPQWDVL SNGNAVQEVA HIANGPHPGN CISVLRAFNS SQNNMLILQE
601: SCVDSSGSLV VYCPVDLPAI NIAMSGEDPS YIPLLPSGFT ISPDGQADQD GGGASTSTST GSRVMGGGSG PGSGGSLITV AFQILVSSLP SAKLNMESVT
701: TVNSLIGNTV QHIKAALNCP SS
001: MSFVVGVGGS GSGSGGDGGG SHHHDGSETD RKKKRYHRHT AQQIQRLESS FKECPHPDEK QRNQLSRELG LAPRQIKFWF QNRRTQLKAQ HERADNSALK
101: AENDKIRCEN IAIREALKHA ICPNCGGPPV SEDPYFDEQK LRIENAHLRE ELERMSTIAS KYMGRPISQL STLHPMHISP LDLSMTSLTG CGPFGHGPSL
201: DFDLLPGSSM AVGPNNNLQS QPNLAISDMD KPIMTGIALT AMEELLRLLQ TNEPLWTRTD GCRDILNLGS YENVFPRSSN RGKNQNFRVE ASRSSGIVFM
301: NAMALVDMFM DCVKWTELFP SIIAASKTLA VISSGMGGTH EGALHLLYEE MEVLSPLVAT REFCELRYCQ QTEQGSWIVV NVSYDLPQFV SHSQSYRFPS
401: GCLIQDMPNG YSKVTWVEHI ETEEKELVHE LYREIIHRGI AFGADRWVTT LQRMCERFAS LSVPASSSRD LGGVILSPEG KRSMMRLAQR MISNYCLSVS
501: RSNNTRSTVV SELNEVGIRV TAHKSPEPNG TVLCAATTFW LPNSPQNVFN FLKDERTRPQ WDVLSNGNAV QEVAHISNGS HPGNCISVLR GSNATHSNNM
601: LILQESSTDS SGAFVVYSPV DLAALNIAMS GEDPSYIPLL SSGFTISPDG NGSNSEQGGA STSSGRASAS GSLITVGFQI MVSNLPTAKL NMESVETVNN
701: LIGTTVHQIK TALSGPTAST TA
101: AENDKIRCEN IAIREALKHA ICPNCGGPPV SEDPYFDEQK LRIENAHLRE ELERMSTIAS KYMGRPISQL STLHPMHISP LDLSMTSLTG CGPFGHGPSL
201: DFDLLPGSSM AVGPNNNLQS QPNLAISDMD KPIMTGIALT AMEELLRLLQ TNEPLWTRTD GCRDILNLGS YENVFPRSSN RGKNQNFRVE ASRSSGIVFM
301: NAMALVDMFM DCVKWTELFP SIIAASKTLA VISSGMGGTH EGALHLLYEE MEVLSPLVAT REFCELRYCQ QTEQGSWIVV NVSYDLPQFV SHSQSYRFPS
401: GCLIQDMPNG YSKVTWVEHI ETEEKELVHE LYREIIHRGI AFGADRWVTT LQRMCERFAS LSVPASSSRD LGGVILSPEG KRSMMRLAQR MISNYCLSVS
501: RSNNTRSTVV SELNEVGIRV TAHKSPEPNG TVLCAATTFW LPNSPQNVFN FLKDERTRPQ WDVLSNGNAV QEVAHISNGS HPGNCISVLR GSNATHSNNM
601: LILQESSTDS SGAFVVYSPV DLAALNIAMS GEDPSYIPLL SSGFTISPDG NGSNSEQGGA STSSGRASAS GSLITVGFQI MVSNLPTAKL NMESVETVNN
701: LIGTTVHQIK TALSGPTAST TA
Arabidopsis Description
HDG11Homeobox-leucine zipper protein HDG11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.