Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH39579 | Soybean | nucleus | 94.8 | 93.5 |
VIT_02s0012g02030.t01 | Wine grape | nucleus | 74.9 | 74.06 |
PGSC0003DMT400006155 | Potato | nucleus | 64.64 | 66.75 |
Solyc08g076370.2.1 | Tomato | nucleus | 69.58 | 65.2 |
GSMUA_Achr5P14100_001 | Banana | nucleus | 60.71 | 63.36 |
GSMUA_Achr4P19010_001 | Banana | nucleus | 60.71 | 59.8 |
AT5G46880.3 | Thale cress | nucleus | 59.82 | 57.14 |
CDY43458 | Canola | nucleus | 58.17 | 56.53 |
CDY03177 | Canola | nucleus | 59.06 | 56.42 |
Bra017519.1-P | Field mustard | nucleus | 58.3 | 56.37 |
Bra024984.1-P | Field mustard | nucleus | 55.26 | 54.84 |
CDY33492 | Canola | nucleus | 55.26 | 54.77 |
CDX77711 | Canola | nucleus | 56.65 | 54.31 |
AT4G17710.1 | Thale cress | nucleus | 48.04 | 53.46 |
Os10t0575600-01 | Rice | nucleus | 59.7 | 53.4 |
KXG38837 | Sorghum | nucleus | 59.32 | 53.06 |
TraesCS1D01G197300.1 | Wheat | nucleus | 59.19 | 52.89 |
Zm00001d030069_P004 | Maize | nucleus | 59.06 | 52.71 |
HORVU1Hr1G050620.2 | Barley | nucleus | 59.06 | 52.66 |
TraesCS1B01G208400.1 | Wheat | nucleus | 59.19 | 52.47 |
TraesCS1A01G193400.1 | Wheat | nucleus, plastid | 58.05 | 52.46 |
KRH09477 | Soybean | nucleus | 47.27 | 51.95 |
KRH38939 | Soybean | nucleus | 47.53 | 51.94 |
CDY08866 | Canola | nucleus | 48.42 | 51.9 |
Bra021035.1-P | Field mustard | nucleus | 47.78 | 51.36 |
CDX76559 | Canola | nucleus | 47.78 | 51.36 |
KRH60596 | Soybean | nucleus | 45.5 | 50.35 |
KRH41898 | Soybean | nucleus | 45.37 | 49.65 |
KRH56105 | Soybean | nucleus | 41.95 | 45.4 |
KRH77881 | Soybean | nucleus | 41.44 | 44.73 |
KRH27601 | Soybean | nucleus | 41.32 | 44.54 |
KRH25398 | Soybean | plastid | 42.84 | 44.42 |
KRH13175 | Soybean | cytosol | 9.89 | 44.07 |
KRH26803 | Soybean | nucleus | 43.22 | 43.66 |
KRH22554 | Soybean | nucleus | 43.09 | 43.53 |
KRH48236 | Soybean | nucleus | 43.6 | 41.5 |
KRH00641 | Soybean | nucleus | 43.22 | 41.48 |
KRH40539 | Soybean | nucleus | 43.09 | 41.46 |
KRH65144 | Soybean | nucleus | 43.85 | 41.39 |
KRH35356 | Soybean | nucleus | 39.54 | 40.78 |
KRG91238 | Soybean | nucleus | 37.77 | 40.77 |
KRG91457 | Soybean | nucleus | 39.8 | 40.41 |
KRH11810 | Soybean | nucleus | 36.25 | 40.11 |
KRH09109 | Soybean | plastid | 38.66 | 39.35 |
KRH38560 | Soybean | nucleus | 38.15 | 38.79 |
KRH36827 | Soybean | nucleus | 34.73 | 38.65 |
KRH35579 | Soybean | nucleus | 37.14 | 37.66 |
KRH09884 | Soybean | plastid | 35.36 | 37.15 |
KRH44348 | Soybean | nucleus | 35.11 | 37.03 |
KRH23432 | Soybean | plastid | 35.74 | 37.01 |
KRH47277 | Soybean | nucleus | 34.98 | 36.75 |
KRH36826 | Soybean | nucleus | 30.8 | 34.08 |
KRH42428 | Soybean | nucleus | 29.15 | 30.38 |
KRH22254 | Soybean | cytosol | 20.03 | 29.53 |
KRH42429 | Soybean | cytosol | 25.6 | 27.67 |
KRH27078 | Soybean | extracellular, golgi, peroxisome | 11.28 | 26.97 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | EMBL:ACUP02000019 | ncoils:Coil | EnsemblPlantsGene:GLYMA_01G014600 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
InterPro:Homeobox_dom | UniProt:I1J4R3 | InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 | ProteinID:KRH74357.1 |
ProteinID:KRH74358.1 | ProteinID:KRH74359.1 | EnsemblPlants:KRH74360 | ProteinID:KRH74360 | ProteinID:KRH74360.1 | ProteinID:KRH74361.1 |
PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 |
PANTHER:PTHR24326:SF267 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf |
InterPro:START_lipid-bd_dom | UniParc:UPI00023BAEF8 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:1404289..1411222
Molecular Weight (calculated)
88098.0 Da
IEP (calculated)
5.618
GRAVY (calculated)
-0.363
Length
789 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGDCQVMSS MGGNVVVNSD TLFSSSIQNS SFNFIPTMPF QPFPSMKEED GILRGKEEME SGSGSEQLVE DKSGYEQESH EEPTKKKRYH RHTARQIQEM
101: ESLFKECPHP DDKQRLKLSH ELGLKPRQVK FWFQNRRTQM KAQQDRADNM ILRAENETLK SENYRLQAAL RNVICPNCGG PCIMGADMGF DEHQLRIENA
201: RLREELERVC CLTTRYTGRP IQTMAADPTL MAPSLDLDMN MYPRHFSDPI APCTEMIPVP MLPPEASPFS EGGVLMEEEK SLALELAASS MAELVKMCQT
301: NEPLWIQSSE GEREVLNFEE HARMFVWPQN LKNRSELRTE ASRDTSVVII NSVTLVDAFL DAQKWMELFP TIVSRAKTVQ IISSGASGLA SGTLQLMCAE
401: FQVLSPLVST RETHFLRYCQ QNAEEGTWAI VDFPVDSFHQ NFHPSYPRYC RRSSGCVIQD MPNGYSRVTW VEHAKVEEKP VHQIFCNYVY SGMAFGAQRW
501: LGVLQRQCER VASLMARNIS DLGVIPSPDA RKNLMKLAQR MIKTFSLNMS TSGGQSWTAI SDSPEDTVRI TTRKITEPGQ PNGVILSAVS TTWLPYSHTK
601: VFDLLRDERH RSQMDTLSNG NSLNEVAHIA NGSHPGNCIS LLRINVASNS SQNVELMLQE SCTDQSGSLV VYTTIDVDAI QLAMSGEDPS CIALLPQGFK
701: IVPMLSSPIT DTTNSSEPPI SLNNNSGGCL LTMGVQVLAS TIPSAKLNLS SVTAINNHLC NTLHQIEAAL SSTNSHENGF FLCTEPTKQ
101: ESLFKECPHP DDKQRLKLSH ELGLKPRQVK FWFQNRRTQM KAQQDRADNM ILRAENETLK SENYRLQAAL RNVICPNCGG PCIMGADMGF DEHQLRIENA
201: RLREELERVC CLTTRYTGRP IQTMAADPTL MAPSLDLDMN MYPRHFSDPI APCTEMIPVP MLPPEASPFS EGGVLMEEEK SLALELAASS MAELVKMCQT
301: NEPLWIQSSE GEREVLNFEE HARMFVWPQN LKNRSELRTE ASRDTSVVII NSVTLVDAFL DAQKWMELFP TIVSRAKTVQ IISSGASGLA SGTLQLMCAE
401: FQVLSPLVST RETHFLRYCQ QNAEEGTWAI VDFPVDSFHQ NFHPSYPRYC RRSSGCVIQD MPNGYSRVTW VEHAKVEEKP VHQIFCNYVY SGMAFGAQRW
501: LGVLQRQCER VASLMARNIS DLGVIPSPDA RKNLMKLAQR MIKTFSLNMS TSGGQSWTAI SDSPEDTVRI TTRKITEPGQ PNGVILSAVS TTWLPYSHTK
601: VFDLLRDERH RSQMDTLSNG NSLNEVAHIA NGSHPGNCIS LLRINVASNS SQNVELMLQE SCTDQSGSLV VYTTIDVDAI QLAMSGEDPS CIALLPQGFK
701: IVPMLSSPIT DTTNSSEPPI SLNNNSGGCL LTMGVQVLAS TIPSAKLNLS SVTAINNHLC NTLHQIEAAL SSTNSHENGF FLCTEPTKQ
001: MLTMGEGNVM TSNNRFASPP QQPSSSSPGT IQNPNFNFIP FNSYSSIIPK EEHGMMSMMM MMGDGTVEEM MENGSAGGSF GSGSEQAEDP KFGNESDVNE
101: LHDDEQPPPA KKKRYHRHTN RQIQEMEALF KENPHPDDKQ RKRLSAELGL KPRQVKFWFQ NRRTQMKAQQ DRNENVMLRA ENDNLKSENC HLQAELRCLS
201: CPSCGGPTVL GDIPFNEIHI ENCRLREELD RLCCIASRYT GRPMQSMPPS QPLINPSPML PHHQPSLELD MSVYAGNFPE QSCTDMMMLP PQDTACFFPD
301: QTANNNNNNN MLLADEEKVI AMEFAVSCVQ ELTKMCDTEE PLWIKKKSDK IGGEILCLNE EEYMRLFPWP MENQNNKGDF LREASKANAV VIMNSITLVD
401: AFLNADKWSE MFCSIVARAK TVQIISSGVS GASGSLLLMF AELQVLSPLV PTREAYFLRY VEQNAETGNW AIVDFPIDSF HDQMQPMNTI THEYKRKPSG
501: CIIQDMPNGY SQVKWVEHVE VDEKHVHETF AEYVKSGMAF GANRWLDVLQ RQCERIASLM ARNITDLGVI SSAEARRNIM RLSQRLVKTF CVNISTAYGQ
601: SWTALSETTK DTVRITTRKM CEPGQPTGVV LCAVSTTWLP FSHHQVFDLI RDQHHQSLLE VLFNGNSPHE VAHIANGSHP GNCISLLRIN VASNSWHNVE
701: LMLQESCIDN SGSLIVYSTV DVDSIQQAMN GEDSSNIPIL PLGFSIVPVN PPEGISVNSH SPPSCLLTVG IQVLASNVPT AKPNLSTVTT INNHLCATVN
801: QITSALSNTI TPVIASSADV SNQEVS
101: LHDDEQPPPA KKKRYHRHTN RQIQEMEALF KENPHPDDKQ RKRLSAELGL KPRQVKFWFQ NRRTQMKAQQ DRNENVMLRA ENDNLKSENC HLQAELRCLS
201: CPSCGGPTVL GDIPFNEIHI ENCRLREELD RLCCIASRYT GRPMQSMPPS QPLINPSPML PHHQPSLELD MSVYAGNFPE QSCTDMMMLP PQDTACFFPD
301: QTANNNNNNN MLLADEEKVI AMEFAVSCVQ ELTKMCDTEE PLWIKKKSDK IGGEILCLNE EEYMRLFPWP MENQNNKGDF LREASKANAV VIMNSITLVD
401: AFLNADKWSE MFCSIVARAK TVQIISSGVS GASGSLLLMF AELQVLSPLV PTREAYFLRY VEQNAETGNW AIVDFPIDSF HDQMQPMNTI THEYKRKPSG
501: CIIQDMPNGY SQVKWVEHVE VDEKHVHETF AEYVKSGMAF GANRWLDVLQ RQCERIASLM ARNITDLGVI SSAEARRNIM RLSQRLVKTF CVNISTAYGQ
601: SWTALSETTK DTVRITTRKM CEPGQPTGVV LCAVSTTWLP FSHHQVFDLI RDQHHQSLLE VLFNGNSPHE VAHIANGSHP GNCISLLRIN VASNSWHNVE
701: LMLQESCIDN SGSLIVYSTV DVDSIQQAMN GEDSSNIPIL PLGFSIVPVN PPEGISVNSH SPPSCLLTVG IQVLASNVPT AKPNLSTVTT INNHLCATVN
801: QITSALSNTI TPVIASSADV SNQEVS
Arabidopsis Description
HDG5Homeobox-leucine zipper protein HDG5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.