Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017519.1-P | Field mustard | nucleus | 97.54 | 97.06 |
| CDY03177 | Canola | nucleus | 95.44 | 93.83 |
| AT5G46880.3 | Thale cress | nucleus | 85.71 | 84.26 |
| CDY33492 | Canola | nucleus | 82.39 | 84.05 |
| CDX77711 | Canola | nucleus | 84.61 | 83.48 |
| VIT_02s0012g02030.t01 | Wine grape | nucleus | 58.99 | 60.03 |
| CDY08866 | Canola | nucleus | 54.31 | 59.92 |
| CDX76559 | Canola | nucleus | 53.45 | 59.13 |
| KRH74360 | Soybean | nucleus | 56.53 | 58.17 |
| KRH39579 | Soybean | nucleus | 56.65 | 57.5 |
| PGSC0003DMT400006155 | Potato | nucleus | 53.2 | 56.54 |
| GSMUA_Achr5P14100_001 | Banana | nucleus | 50.62 | 54.37 |
| Solyc08g076370.2.1 | Tomato | nucleus | 56.28 | 54.28 |
| GSMUA_Achr4P19010_001 | Banana | nucleus | 51.23 | 51.94 |
| TraesCS1A01G193400.1 | Wheat | nucleus, plastid | 50.99 | 47.42 |
| TraesCS1D01G197300.1 | Wheat | nucleus | 50.99 | 46.89 |
| HORVU1Hr1G050620.2 | Barley | nucleus | 50.86 | 46.67 |
| KXG38837 | Sorghum | nucleus | 50.49 | 46.49 |
| Os10t0575600-01 | Rice | nucleus | 50.49 | 46.49 |
| TraesCS1B01G208400.1 | Wheat | nucleus | 50.86 | 46.4 |
| CDY23096 | Canola | nucleus | 7.51 | 46.21 |
| Zm00001d030069_P004 | Maize | nucleus | 50.25 | 46.15 |
| CDY21319 | Canola | nucleus | 39.16 | 44.41 |
| CDX90879 | Canola | nucleus | 39.16 | 44.41 |
| CDX76399 | Canola | nucleus | 38.67 | 43.92 |
| CDY27417 | Canola | nucleus | 38.55 | 43.84 |
| CDY16639 | Canola | nucleus | 39.53 | 43.79 |
| CDX94586 | Canola | nucleus | 39.41 | 43.72 |
| CDX98703 | Canola | nucleus | 37.07 | 43.31 |
| CDX94054 | Canola | nucleus | 36.82 | 43.02 |
| CDY06167 | Canola | nucleus | 38.05 | 42.92 |
| CDY71572 | Canola | nucleus | 20.57 | 42.49 |
| CDY11109 | Canola | nucleus | 37.07 | 42.39 |
| CDX68229 | Canola | nucleus | 36.7 | 42.39 |
| CDY66622 | Canola | nucleus | 37.93 | 42.13 |
| CDX96471 | Canola | nucleus | 37.07 | 41.92 |
| CDY10041 | Canola | nucleus | 38.55 | 41.9 |
| CDX72984 | Canola | nucleus | 36.82 | 41.82 |
| CDX79091 | Canola | nucleus | 38.3 | 41.69 |
| CDX96744 | Canola | nucleus | 34.36 | 41.46 |
| CDY26204 | Canola | nucleus | 32.39 | 41.29 |
| CDY42097 | Canola | nucleus | 25.74 | 40.43 |
| CDY19185 | Canola | nucleus | 33.87 | 40.32 |
| CDX83884 | Canola | nucleus | 33.87 | 40.15 |
| CDY26205 | Canola | nucleus | 34.11 | 40.14 |
| CDX74762 | Canola | nucleus | 34.11 | 39.12 |
| CDY18903 | Canola | nucleus | 33.5 | 38.58 |
| CDY49515 | Canola | plasma membrane | 38.42 | 38.47 |
| CDY46842 | Canola | nucleus | 38.55 | 37.71 |
| CDX74347 | Canola | nucleus | 36.7 | 37.58 |
| CDX91894 | Canola | nucleus | 36.7 | 37.53 |
| CDY51143 | Canola | nucleus | 36.45 | 37.47 |
| CDY07201 | Canola | nucleus | 36.33 | 37.44 |
| CDX67855 | Canola | nucleus | 35.34 | 36.79 |
| CDY45684 | Canola | nucleus | 35.47 | 36.73 |
| CDY31916 | Canola | nucleus | 30.17 | 36.4 |
| CDY00515 | Canola | nucleus | 30.05 | 36.26 |
| CDY48272 | Canola | nucleus | 31.28 | 36.08 |
| CDY12213 | Canola | nucleus | 31.53 | 35.96 |
| CDY19129 | Canola | nucleus | 31.9 | 35.63 |
| CDY15339 | Canola | nucleus | 31.77 | 35.29 |
| CDY30748 | Canola | endoplasmic reticulum | 24.88 | 34.41 |
| CDX67929 | Canola | nucleus | 31.28 | 32.44 |
| CDX79408 | Canola | nucleus | 31.16 | 32.44 |
| CDY39874 | Canola | plasma membrane | 7.64 | 32.29 |
| CDY67945 | Canola | nucleus | 27.34 | 32.22 |
| CDY44946 | Canola | nucleus | 25.37 | 31.79 |
| CDY43137 | Canola | nucleus | 26.97 | 31.79 |
| CDY42301 | Canola | nucleus | 26.85 | 31.59 |
| CDX85461 | Canola | cytosol | 27.22 | 31.35 |
| CDY16938 | Canola | nucleus | 25.25 | 31.06 |
| CDY53691 | Canola | nucleus | 27.09 | 30.99 |
| CDY62389 | Canola | cytosol | 18.6 | 30.88 |
| CDX89415 | Canola | cytosol, mitochondrion | 6.65 | 30.34 |
| CDY02713 | Canola | nucleus | 27.22 | 29.91 |
| CDY49937 | Canola | nucleus | 24.63 | 28.82 |
| CDY21211 | Canola | nucleus | 24.01 | 28.1 |
| CDY69499 | Canola | cytosol | 10.34 | 27.63 |
| CDX89416 | Canola | nucleus | 21.8 | 27.27 |
| CDX94443 | Canola | cytosol | 20.69 | 26.75 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | GO:A0A078I2W6 | UniProt:A0A078I2W6 | EnsemblPlants:CDY43458 | ProteinID:CDY43458 |
| ProteinID:CDY43458.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00076691001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF267 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom |
| UniParc:UPI0004EEA84C | SEG:seg | : | : | : | : |
Description
BnaAnng07300DBnaAnng07300D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078I2W6]
Coordinates
chrLK032557:-:253423..258107
Molecular Weight (calculated)
90778.2 Da
IEP (calculated)
5.642
GRAVY (calculated)
-0.342
Length
812 amino acids
Sequence
(BLAST)
(BLAST)
001: YCLLHRDQTH LKHSPATIQN PNFNFIPFNS FSSIIPKEEH GMMSMSMMMM MGDEAVEEMM ENGSVGGSFG SGSEQAEDPK SGTEFDVNEL RDDEQPPPAK
101: KKRYHRHTDR QIQEMEALFK ENPHPDDKQR QRLSHELGLK PRQVKFWFQN RRTQMKAQQD RAENVMLRAD NDNLKLENSQ LQAELRCLSC PSCGGPTVLG
201: DIPFNELHIE NCRLREELDR LCCIASRYTD RPMQPMPPSQ PLINPASELP HHQPSLELDI SAYAGNYPDH PCSDLMSLPP QDSACFFPTQ TINNSSNNML
301: LADEEKVMAM EFAVSCVQEL AKMCDTEEPL WVNKISDKIG GETLCLNEEE YMRLFPWPME KNNNNGDFRR EASKANAVVI MNSITLVNAF LNADKWSEMF
401: CSIVARAKTV QIISSGVSGA SGSLMLMYAE LQVLSPLVPT REAYFLRYVE QNSENGNWAI VDFPIDSFHD QNSPHEYKRK PSGCIIQDMP NGYSKVKWVE
501: HVEVVERHVH ETFAEYVKSG MAFGASRWVD VLERQCERMA SLMARNITDL GVIRSAEARR NMMRLSQRMM KTFCVNISTS YGQSWTALSE TAKDTVRITT
601: RKVCEPGQPT GVVLVAVSTT WLPFSHFKVF DLLRDQHHHS LLEVLFSGNS SHEVAHIANG SHPGNCISLL RINVASNSWH NVELMLQESC IDNSGGLIVY
701: STVGVESIQH VMNGEDPSNV PFLPLGFSVV PVNPPGEVEG ISVNSIPPPS CLLTVGIQVL ASNVPTAKPN LSTVTTINNH LCSIVNQITS VLSSTISPTI
801: ASSAAAAKQD VI
101: KKRYHRHTDR QIQEMEALFK ENPHPDDKQR QRLSHELGLK PRQVKFWFQN RRTQMKAQQD RAENVMLRAD NDNLKLENSQ LQAELRCLSC PSCGGPTVLG
201: DIPFNELHIE NCRLREELDR LCCIASRYTD RPMQPMPPSQ PLINPASELP HHQPSLELDI SAYAGNYPDH PCSDLMSLPP QDSACFFPTQ TINNSSNNML
301: LADEEKVMAM EFAVSCVQEL AKMCDTEEPL WVNKISDKIG GETLCLNEEE YMRLFPWPME KNNNNGDFRR EASKANAVVI MNSITLVNAF LNADKWSEMF
401: CSIVARAKTV QIISSGVSGA SGSLMLMYAE LQVLSPLVPT REAYFLRYVE QNSENGNWAI VDFPIDSFHD QNSPHEYKRK PSGCIIQDMP NGYSKVKWVE
501: HVEVVERHVH ETFAEYVKSG MAFGASRWVD VLERQCERMA SLMARNITDL GVIRSAEARR NMMRLSQRMM KTFCVNISTS YGQSWTALSE TAKDTVRITT
601: RKVCEPGQPT GVVLVAVSTT WLPFSHFKVF DLLRDQHHHS LLEVLFSGNS SHEVAHIANG SHPGNCISLL RINVASNSWH NVELMLQESC IDNSGGLIVY
701: STVGVESIQH VMNGEDPSNV PFLPLGFSVV PVNPPGEVEG ISVNSIPPPS CLLTVGIQVL ASNVPTAKPN LSTVTTINNH LCSIVNQITS VLSSTISPTI
801: ASSAAAAKQD VI
001: MLTMGEGNVM TSNNRFASPP QQPSSSSPGT IQNPNFNFIP FNSYSSIIPK EEHGMMSMMM MMGDGTVEEM MENGSAGGSF GSGSEQAEDP KFGNESDVNE
101: LHDDEQPPPA KKKRYHRHTN RQIQEMEALF KENPHPDDKQ RKRLSAELGL KPRQVKFWFQ NRRTQMKAQQ DRNENVMLRA ENDNLKSENC HLQAELRCLS
201: CPSCGGPTVL GDIPFNEIHI ENCRLREELD RLCCIASRYT GRPMQSMPPS QPLINPSPML PHHQPSLELD MSVYAGNFPE QSCTDMMMLP PQDTACFFPD
301: QTANNNNNNN MLLADEEKVI AMEFAVSCVQ ELTKMCDTEE PLWIKKKSDK IGGEILCLNE EEYMRLFPWP MENQNNKGDF LREASKANAV VIMNSITLVD
401: AFLNADKWSE MFCSIVARAK TVQIISSGVS GASGSLLLMF AELQVLSPLV PTREAYFLRY VEQNAETGNW AIVDFPIDSF HDQMQPMNTI THEYKRKPSG
501: CIIQDMPNGY SQVKWVEHVE VDEKHVHETF AEYVKSGMAF GANRWLDVLQ RQCERIASLM ARNITDLGVI SSAEARRNIM RLSQRLVKTF CVNISTAYGQ
601: SWTALSETTK DTVRITTRKM CEPGQPTGVV LCAVSTTWLP FSHHQVFDLI RDQHHQSLLE VLFNGNSPHE VAHIANGSHP GNCISLLRIN VASNSWHNVE
701: LMLQESCIDN SGSLIVYSTV DVDSIQQAMN GEDSSNIPIL PLGFSIVPVN PPEGISVNSH SPPSCLLTVG IQVLASNVPT AKPNLSTVTT INNHLCATVN
801: QITSALSNTI TPVIASSADV SNQEVS
101: LHDDEQPPPA KKKRYHRHTN RQIQEMEALF KENPHPDDKQ RKRLSAELGL KPRQVKFWFQ NRRTQMKAQQ DRNENVMLRA ENDNLKSENC HLQAELRCLS
201: CPSCGGPTVL GDIPFNEIHI ENCRLREELD RLCCIASRYT GRPMQSMPPS QPLINPSPML PHHQPSLELD MSVYAGNFPE QSCTDMMMLP PQDTACFFPD
301: QTANNNNNNN MLLADEEKVI AMEFAVSCVQ ELTKMCDTEE PLWIKKKSDK IGGEILCLNE EEYMRLFPWP MENQNNKGDF LREASKANAV VIMNSITLVD
401: AFLNADKWSE MFCSIVARAK TVQIISSGVS GASGSLLLMF AELQVLSPLV PTREAYFLRY VEQNAETGNW AIVDFPIDSF HDQMQPMNTI THEYKRKPSG
501: CIIQDMPNGY SQVKWVEHVE VDEKHVHETF AEYVKSGMAF GANRWLDVLQ RQCERIASLM ARNITDLGVI SSAEARRNIM RLSQRLVKTF CVNISTAYGQ
601: SWTALSETTK DTVRITTRKM CEPGQPTGVV LCAVSTTWLP FSHHQVFDLI RDQHHQSLLE VLFNGNSPHE VAHIANGSHP GNCISLLRIN VASNSWHNVE
701: LMLQESCIDN SGSLIVYSTV DVDSIQQAMN GEDSSNIPIL PLGFSIVPVN PPEGISVNSH SPPSCLLTVG IQVLASNVPT AKPNLSTVTT INNHLCATVN
801: QITSALSNTI TPVIASSADV SNQEVS
Arabidopsis Description
HDG5Homeobox-leucine zipper protein HDG5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.