Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003213.1-P | Field mustard | nucleus | 99.86 | 99.86 |
| CDY62389 | Canola | cytosol | 65.35 | 94.89 |
| CDY69499 | Canola | cytosol | 36.34 | 84.87 |
| CDY16938 | Canola | nucleus | 68.17 | 73.33 |
| CDX85461 | Canola | cytosol | 69.01 | 69.5 |
| CDY02713 | Canola | nucleus | 69.15 | 66.44 |
| AT1G34650.1 | Thale cress | nucleus | 60.28 | 60.45 |
| AT5G17320.1 | Thale cress | nucleus | 60.42 | 59.75 |
| Os06t0208100-00 | Rice | nucleus | 10.42 | 57.36 |
| CDY43137 | Canola | nucleus | 45.49 | 46.88 |
| CDY49937 | Canola | nucleus | 45.63 | 46.69 |
| CDY67945 | Canola | nucleus | 45.21 | 46.59 |
| CDY21211 | Canola | nucleus | 45.49 | 46.54 |
| CDY42301 | Canola | nucleus | 44.79 | 46.09 |
| CDY44946 | Canola | nucleus | 41.13 | 45.06 |
| Solyc09g057530.1.1 | Tomato | cytosol | 8.31 | 43.07 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 42.39 | 42.16 |
| Solyc09g066070.2.1 | Tomato | cytosol | 24.79 | 40.84 |
| PGSC0003DMT400051268 | Potato | cytosol | 28.31 | 40.28 |
| Zm00001d018225_P001 | Maize | nucleus | 38.59 | 39.6 |
| PGSC0003DMT400085057 | Potato | cytosol | 26.62 | 39.54 |
| PGSC0003DMT400038820 | Potato | extracellular | 20.14 | 39.29 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 37.89 | 39.27 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 37.89 | 39.27 |
| Zm00001d052133_P001 | Maize | nucleus | 38.31 | 38.97 |
| Solyc07g026560.1.1 | Tomato | cytosol | 25.92 | 38.9 |
| KRH11810 | Soybean | nucleus | 38.73 | 38.57 |
| KRH36827 | Soybean | nucleus | 38.31 | 38.36 |
| EES05874 | Sorghum | nucleus | 38.17 | 38.33 |
| Zm00001d044973_P001 | Maize | nucleus | 37.18 | 38.32 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 37.61 | 38.31 |
| Zm00001d037140_P004 | Maize | nucleus | 36.9 | 38.14 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 36.48 | 38.03 |
| CDX96744 | Canola | nucleus | 35.92 | 37.89 |
| Solyc09g060130.1.1 | Tomato | cytosol | 23.66 | 37.84 |
| GSMUA_Achr10P... | Banana | nucleus | 37.89 | 37.83 |
| Solyc10g018030.1.1 | Tomato | cytosol | 21.97 | 37.77 |
| CDY42097 | Canola | nucleus | 27.32 | 37.52 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 31.83 | 37.48 |
| EER89393 | Sorghum | nucleus | 36.9 | 37.43 |
| Solyc09g057540.2.1 | Tomato | cytosol | 26.2 | 37.42 |
| CDX83884 | Canola | nucleus | 36.06 | 37.37 |
| Solyc04g025490.1.1 | Tomato | cytosol | 12.68 | 37.19 |
| Solyc11g011940.1.1 | Tomato | nucleus | 37.46 | 37.1 |
| GSMUA_Achr10P... | Banana | nucleus | 35.63 | 37.1 |
| Solyc07g037910.1.1 | Tomato | cytosol | 10.99 | 36.97 |
| Solyc09g066030.1.1 | Tomato | nucleus | 37.61 | 36.93 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 38.31 | 36.81 |
| Solyc11g022420.1.1 | Tomato | cytosol | 24.65 | 36.53 |
| Solyc05g015030.1.1 | Tomato | cytosol | 24.37 | 36.5 |
| CDY26204 | Canola | nucleus | 32.68 | 36.42 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 18.87 | 36.41 |
| Solyc09g060170.1.1 | Tomato | cytosol | 17.61 | 36.34 |
| PGSC0003DMT400051266 | Potato | cytosol | 19.86 | 36.25 |
| CDY26205 | Canola | nucleus | 35.21 | 36.23 |
| Solyc09g066050.2.1 | Tomato | cytosol | 28.03 | 35.99 |
| CDY19185 | Canola | nucleus | 34.51 | 35.92 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 37.18 | 35.87 |
| CDX68229 | Canola | nucleus | 35.49 | 35.85 |
| CDY11109 | Canola | nucleus | 35.77 | 35.77 |
| KRH36826 | Soybean | nucleus | 35.63 | 35.48 |
| Solyc08g062510.2.1 | Tomato | nucleus | 32.54 | 35.38 |
| CDX96471 | Canola | nucleus | 35.35 | 34.96 |
| CDX72984 | Canola | nucleus | 35.07 | 34.83 |
| Solyc10g018020.1.1 | Tomato | extracellular | 16.48 | 34.82 |
| CDY21319 | Canola | nucleus | 35.07 | 34.78 |
| Solyc07g026570.1.1 | Tomato | nucleus | 6.9 | 34.75 |
| CDX90879 | Canola | nucleus | 34.93 | 34.64 |
| CDX76399 | Canola | nucleus | 34.79 | 34.55 |
| CDY27417 | Canola | nucleus | 34.37 | 34.17 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 34.51 | 33.79 |
| CDY66622 | Canola | nucleus | 34.51 | 33.52 |
| CDX94586 | Canola | nucleus | 34.37 | 33.33 |
| CDY16639 | Canola | nucleus | 34.37 | 33.29 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 34.23 | 33.29 |
| CDX98703 | Canola | nucleus | 32.54 | 33.24 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 34.23 | 33.2 |
| PGSC0003DMT400036411 | Potato | nucleus | 24.51 | 33.14 |
| Os06t0207966-00 | Rice | plastid | 12.25 | 33.08 |
| CDY06167 | Canola | nucleus | 33.38 | 32.92 |
| CDX94054 | Canola | nucleus | 32.11 | 32.81 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 32.25 | 32.76 |
| Solyc04g025480.1.1 | Tomato | cytosol | 30.14 | 32.67 |
| CDX79091 | Canola | nucleus | 33.94 | 32.31 |
| CDY00515 | Canola | nucleus | 30.42 | 32.1 |
| Solyc08g062520.2.1 | Tomato | cytosol | 23.1 | 32.09 |
| CDY31916 | Canola | nucleus | 30.28 | 31.95 |
| CDY23096 | Canola | nucleus | 5.92 | 31.82 |
| CDY18903 | Canola | nucleus | 31.41 | 31.63 |
| CDX74762 | Canola | nucleus | 31.27 | 31.36 |
| CDY10041 | Canola | nucleus | 32.96 | 31.33 |
| CDY48272 | Canola | nucleus | 30.7 | 30.97 |
| CDX89415 | Canola | cytosol, mitochondrion | 7.75 | 30.9 |
| CDY12213 | Canola | nucleus | 30.7 | 30.62 |
| CDX67855 | Canola | nucleus | 33.52 | 30.51 |
| CDY51143 | Canola | nucleus | 33.94 | 30.51 |
| CDY07201 | Canola | nucleus | 33.66 | 30.33 |
| CDY71572 | Canola | nucleus | 16.76 | 30.28 |
| CDX74347 | Canola | nucleus | 33.8 | 30.26 |
| CDY45684 | Canola | nucleus | 33.38 | 30.23 |
| CDX91894 | Canola | nucleus | 33.52 | 29.97 |
| KRH42428 | Soybean | nucleus | 31.83 | 29.85 |
| CDY49515 | Canola | plasma membrane | 33.24 | 29.1 |
| CDY30748 | Canola | endoplasmic reticulum | 23.8 | 28.79 |
| CDY46842 | Canola | nucleus | 33.38 | 28.55 |
| CDY19129 | Canola | nucleus | 28.59 | 27.92 |
| CDX79408 | Canola | nucleus | 30.56 | 27.82 |
| CDX76559 | Canola | nucleus | 28.45 | 27.52 |
| CDY15339 | Canola | nucleus | 28.31 | 27.5 |
| CDY08866 | Canola | nucleus | 28.31 | 27.31 |
| CDX67929 | Canola | nucleus | 30.0 | 27.2 |
| KRH42429 | Soybean | cytosol | 27.89 | 27.12 |
| CDX77711 | Canola | nucleus | 31.41 | 27.1 |
| CDY43458 | Canola | nucleus | 30.99 | 27.09 |
| CDY33492 | Canola | nucleus | 30.14 | 26.88 |
| CDY03177 | Canola | nucleus | 30.42 | 26.15 |
| CDX89416 | Canola | nucleus | 21.69 | 23.73 |
| CDX94443 | Canola | cytosol | 20.7 | 23.41 |
| TraesCSU01G150000.1 | Wheat | nucleus | 7.04 | 22.94 |
| CDY39874 | Canola | plasma membrane | 5.63 | 20.83 |
| TraesCSU01G244000.1 | Wheat | nucleus | 5.92 | 20.39 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 1.97 | 11.76 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078IUY7 | UniProt:A0A078IUY7 | EnsemblPlants:CDY53691 |
| ProteinID:CDY53691 | ProteinID:CDY53691.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 |
| EnsemblPlantsGene:GSBRNA2T00011247001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 |
| PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 |
| SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom |
| UniParc:UPI0004EE0CB4 | SEG:seg | : | : | : | : |
Description
BnaA07g37850DBnaA07g37850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUY7]
Coordinates
chrLK033228:+:42825..51121
Molecular Weight (calculated)
79772.6 Da
IEP (calculated)
6.868
GRAVY (calculated)
-0.333
Length
710 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGRDSSSS DEQETSLYTS DGDKRIYHRH SNHQIQKLEA YFKECPHPDD LQQLKLGEEL KLKQKQIKFW FQNKRTQAKV QNEKADNASL RTENMKIRRE
101: NEAMQEALNT VTCPPCGGPH PEQVDRKLYF QNLSANNAYL REERDKLSIL VYKTEGHPKP IVNALAYLHG PSLHASTSNN PHVTYGTSSN HLVEPPSLLR
201: ELYLREHISF AQPPQPRQLQ CSPPLSNMEK VMMTEAMVAA VTEVITLIQT EEPMWIKSSI DSRLVIDQEN YEKKFTKNSY FKTRIESSKE IAVIPLDAKN
301: LVNMLLDTEK WASLFSTIVS KAKTIHVLES SKLMYEQLHI LSPLLPPREF MILRCCQQLE EGLWVIADVS YHQVAFEFEF GTPACYKRPS GFLIQAMPNG
401: HSKVTWMEHV EVNDKVRAHR IYRDLLCGGF GYGARRWTAT LERMCERLSL YSVSDFPTTD DPGVVKTING RRRLMDLGER MLKNFAWILN MPEKSDFSQQ
501: SATNSSGVNI SVRVNKEAGQ PVGLIVCACS SLCLPLAPLQ VYNFLKNLEV RHQWDVLCHA SPVTEVARFV TGANNKNCVN ILQPSSAAEG GDLMIIQDSF
601: IDALGGMVVY APVDLSTAHA AVSGNVNPSD IPILPSGFVI SRDGRPSATA ELDGGCDNCK TLLTVAFQIL VTGPTIYEEL QMDKWTTSVD TLISSTITKV
701: KAMLNCHDGQ
101: NEAMQEALNT VTCPPCGGPH PEQVDRKLYF QNLSANNAYL REERDKLSIL VYKTEGHPKP IVNALAYLHG PSLHASTSNN PHVTYGTSSN HLVEPPSLLR
201: ELYLREHISF AQPPQPRQLQ CSPPLSNMEK VMMTEAMVAA VTEVITLIQT EEPMWIKSSI DSRLVIDQEN YEKKFTKNSY FKTRIESSKE IAVIPLDAKN
301: LVNMLLDTEK WASLFSTIVS KAKTIHVLES SKLMYEQLHI LSPLLPPREF MILRCCQQLE EGLWVIADVS YHQVAFEFEF GTPACYKRPS GFLIQAMPNG
401: HSKVTWMEHV EVNDKVRAHR IYRDLLCGGF GYGARRWTAT LERMCERLSL YSVSDFPTTD DPGVVKTING RRRLMDLGER MLKNFAWILN MPEKSDFSQQ
501: SATNSSGVNI SVRVNKEAGQ PVGLIVCACS SLCLPLAPLQ VYNFLKNLEV RHQWDVLCHA SPVTEVARFV TGANNKNCVN ILQPSSAAEG GDLMIIQDSF
601: IDALGGMVVY APVDLSTAHA AVSGNVNPSD IPILPSGFVI SRDGRPSATA ELDGGCDNCK TLLTVAFQIL VTGPTIYEEL QMDKWTTSVD TLISSTITKV
701: KAMLNCHDGQ
001: MDFTRDDNSS DERENDVDAN TNNRHEKKGY HRHTNEQIHR LETYFKECPH PDEFQRRLLG EELNLKPKQI KFWFQNKRTQ AKSHNEKADN AALRAENIKI
101: RRENESMEDA LNNVVCPPCG GRGPGREDQL RHLQKLRAQN AYLKDEYERV SNYLKQYGGH SMHNVEATPY LHGPSNHAST SKNRPALYGT SSNRLPEPSS
201: IFRGPYTRGN MNTTAPPQPR KPLEMQNFQP LSQLEKIAML EAAEKAVSEV LSLIQMDDTM WKKSSIDDRL VIDPGLYEKY FTKTNTNGRP ESSKDVVVVQ
301: MDAGNLIDIF LTAEKWARLF PTIVNEAKTI HVLDSVDHRG KTFSRVIYEQ LHILSPLVPP REFMILRTCQ QIEDNVWMIA DVSCHLPNIE FDLSFPICTK
401: RPSGVLIQAL PHGFSKVTWI EHVVVNDNRV RPHKLYRDLL YGGFGYGARR WTVTLERTCE RLIFSTSVPA LPNNDNPGVV QTIRGRNSVM HLGERMLRNF
501: AWMMKMVNKL DFSPQSETNN SGIRIGVRIN NEAGQPPGLI VCAGSSLSLP LPPVQVYDFL KNLEVRHQWD VLCHGNPATE AARFVTGSNP RNTVSFLEPS
601: IRDINTKLMI LQDSFKDALG GMVAYAPMDL NTACAAISGD IDPTTIPILP SGFMISRDGR PSEGEAEGGS YTLLTVAFQI LVSGPSYSPD TNLEVSATTV
701: NTLISSTVQR IKAMLKCE
101: RRENESMEDA LNNVVCPPCG GRGPGREDQL RHLQKLRAQN AYLKDEYERV SNYLKQYGGH SMHNVEATPY LHGPSNHAST SKNRPALYGT SSNRLPEPSS
201: IFRGPYTRGN MNTTAPPQPR KPLEMQNFQP LSQLEKIAML EAAEKAVSEV LSLIQMDDTM WKKSSIDDRL VIDPGLYEKY FTKTNTNGRP ESSKDVVVVQ
301: MDAGNLIDIF LTAEKWARLF PTIVNEAKTI HVLDSVDHRG KTFSRVIYEQ LHILSPLVPP REFMILRTCQ QIEDNVWMIA DVSCHLPNIE FDLSFPICTK
401: RPSGVLIQAL PHGFSKVTWI EHVVVNDNRV RPHKLYRDLL YGGFGYGARR WTVTLERTCE RLIFSTSVPA LPNNDNPGVV QTIRGRNSVM HLGERMLRNF
501: AWMMKMVNKL DFSPQSETNN SGIRIGVRIN NEAGQPPGLI VCAGSSLSLP LPPVQVYDFL KNLEVRHQWD VLCHGNPATE AARFVTGSNP RNTVSFLEPS
601: IRDINTKLMI LQDSFKDALG GMVAYAPMDL NTACAAISGD IDPTTIPILP SGFMISRDGR PSEGEAEGGS YTLLTVAFQI LVSGPSYSPD TNLEVSATTV
701: NTLISSTVQR IKAMLKCE
Arabidopsis Description
HDG9Homeobox-leucine zipper protein HDG9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFI0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.