Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g025490.1.1 | Tomato | cytosol | 34.2 | 92.56 |
| PGSC0003DMT400038820 | Potato | extracellular | 46.87 | 84.34 |
| Solyc09g057530.1.1 | Tomato | cytosol | 13.44 | 64.23 |
| Solyc10g018030.1.1 | Tomato | cytosol | 39.39 | 62.47 |
| Solyc11g022410.1.1 | Tomato | extracellular | 7.02 | 62.16 |
| Solyc09g066070.2.1 | Tomato | cytosol | 40.61 | 61.72 |
| Solyc10g018020.1.1 | Tomato | extracellular | 31.14 | 60.71 |
| Solyc07g026560.1.1 | Tomato | cytosol | 41.83 | 57.93 |
| Solyc09g066050.2.1 | Tomato | cytosol | 47.79 | 56.6 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 31.76 | 56.52 |
| Solyc09g060170.1.1 | Tomato | cytosol | 29.47 | 56.1 |
| Solyc11g022420.1.1 | Tomato | cytosol | 40.61 | 55.53 |
| Solyc09g060130.1.1 | Tomato | cytosol | 37.56 | 55.41 |
| Solyc08g062520.2.1 | Tomato | cytosol | 43.21 | 55.38 |
| Solyc11g022430.1.1 | Tomato | cytosol | 15.11 | 55.31 |
| Solyc11g011940.1.1 | Tomato | nucleus | 59.08 | 53.97 |
| Solyc08g062510.2.1 | Tomato | nucleus | 52.67 | 52.83 |
| Solyc07g037910.1.1 | Tomato | cytosol | 16.79 | 52.13 |
| Solyc09g057540.2.1 | Tomato | cytosol | 38.47 | 50.7 |
| Solyc09g066030.1.1 | Tomato | nucleus | 55.42 | 50.21 |
| Solyc05g015030.1.1 | Tomato | cytosol | 36.18 | 50.0 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 50.53 | 47.35 |
| CDY69499 | Canola | cytosol | 17.71 | 38.16 |
| CDY62389 | Canola | cytosol | 28.09 | 37.63 |
| Os06t0207966-00 | Rice | plastid | 13.59 | 33.84 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 35.73 | 32.77 |
| KRH36827 | Soybean | nucleus | 35.11 | 32.44 |
| KRH11810 | Soybean | nucleus | 34.66 | 31.84 |
| AT3G03260.1 | Thale cress | nucleus | 32.52 | 30.47 |
| CDY53691 | Canola | nucleus | 32.67 | 30.14 |
| Bra003213.1-P | Field mustard | nucleus | 32.52 | 30.0 |
| CDX85461 | Canola | cytosol | 32.21 | 29.93 |
| Bra023611.1-P | Field mustard | nucleus | 32.06 | 29.79 |
| GSMUA_Achr10P... | Banana | nucleus | 30.99 | 29.77 |
| Solyc03g098200.2.1 | Tomato | nucleus | 32.52 | 29.54 |
| Bra008562.1-P | Field mustard | cytosol, nucleus, plastid | 32.52 | 29.46 |
| Solyc06g072310.2.1 | Tomato | nucleus | 32.21 | 29.43 |
| Solyc03g031760.2.1 | Tomato | cytosol | 27.94 | 29.09 |
| Bra020066.1-P | Field mustard | nucleus | 30.23 | 29.03 |
| CDY42301 | Canola | nucleus | 30.53 | 28.99 |
| Bra032003.1-P | Field mustard | nucleus | 30.38 | 28.88 |
| Zm00001d044973_P001 | Maize | nucleus | 30.38 | 28.88 |
| EER89393 | Sorghum | nucleus | 30.84 | 28.86 |
| AT1G34650.1 | Thale cress | nucleus | 31.14 | 28.81 |
| CDY43137 | Canola | nucleus | 30.23 | 28.74 |
| GSMUA_Achr10P... | Banana | nucleus | 31.14 | 28.69 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 29.92 | 28.61 |
| Zm00001d018225_P001 | Maize | nucleus | 30.23 | 28.61 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 29.77 | 28.47 |
| CDY02713 | Canola | nucleus | 31.91 | 28.28 |
| Zm00001d037140_P004 | Maize | nucleus | 29.62 | 28.24 |
| Zm00001d052133_P001 | Maize | nucleus | 30.08 | 28.22 |
| AT5G17320.1 | Thale cress | nucleus | 30.84 | 28.13 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 31.6 | 28.12 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 29.92 | 28.12 |
| CDY67945 | Canola | nucleus | 29.47 | 28.01 |
| EES05874 | Sorghum | nucleus | 30.08 | 27.86 |
| CDY44946 | Canola | nucleus | 27.48 | 27.78 |
| Bra021363.1-P | Field mustard | nucleus | 30.53 | 27.51 |
| Solyc10g005330.2.1 | Tomato | nucleus | 29.77 | 27.39 |
| CDY21211 | Canola | nucleus | 28.86 | 27.23 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 30.69 | 27.2 |
| CDY16938 | Canola | nucleus | 27.33 | 27.12 |
| CDY49937 | Canola | nucleus | 28.7 | 27.09 |
| KRH36826 | Soybean | nucleus | 29.31 | 26.93 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 24.73 | 26.87 |
| Solyc10g006420.2.1 | Tomato | cytosol | 21.22 | 26.38 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 28.86 | 25.89 |
| Solyc02g080260.2.1 | Tomato | nucleus | 29.62 | 25.83 |
| KRH42429 | Soybean | cytosol | 28.7 | 25.75 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 28.55 | 25.55 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 28.09 | 25.38 |
| KRH42428 | Soybean | nucleus | 29.16 | 25.23 |
| Solyc12g005830.1.1 | Tomato | nucleus | 27.79 | 24.23 |
| Solyc07g041850.1.1 | Tomato | nucleus | 24.73 | 23.82 |
| Solyc06g035940.2.1 | Tomato | nucleus | 24.12 | 23.37 |
| Solyc03g120620.2.1 | Tomato | nucleus | 27.48 | 23.23 |
| Solyc01g091630.2.1 | Tomato | nucleus | 28.86 | 23.02 |
| Solyc06g050160.2.1 | Tomato | nucleus | 21.98 | 22.05 |
| Solyc08g076370.2.1 | Tomato | nucleus | 27.94 | 21.73 |
| Solyc03g026070.2.1 | Tomato | nucleus | 26.41 | 21.44 |
| Os06t0208100-00 | Rice | nucleus | 3.51 | 17.83 |
| Solyc07g026570.1.1 | Tomato | nucleus | 3.21 | 14.89 |
| Solyc04g025740.1.1 | Tomato | nucleus | 2.9 | 12.84 |
Protein Annotations
| EnsemblPlants:Solyc04g025480.1.1 | EnsemblPlantsGene:Solyc04g025480.1 | Gene3D:3.30.530.20 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 |
| InterPro:IPR002913 | InterPro:IPR023393 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 |
| PFAM:PF01852 | PFscan:PS50848 | SEG:seg | SMART:SM00234 | SUPFAM:SSF55961 | UniParc:UPI0002765A34 |
| UniProt:K4BQZ3 | MapMan:15.5.3.3 | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:22681899..22689324
Molecular Weight (calculated)
73878.8 Da
IEP (calculated)
5.874
GRAVY (calculated)
-0.360
Length
655 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDSENGHVG ESSRTCQQRL EKRRQNQRLV VEKTQPVETS SSARSHPNEN QQNKLSREIG PYTEQNVVRF QSKSTPVEHE SISNVIPSVP GTMGSNMAPP
101: KSNTSYESLL SQNISGSSTA YHPPFLQSSN NNNNNNNARA HSISDNISSV MSPSPQENYE FHHNNREKSI ILGILIAALN EMAELLKFDI PISIESSISN
201: EFLFNWENYE EIFSNPNQPG ESPTTRFESS KVYGVVPMNV IELIQNFLDP IKWMNMVPTI VTKARTVEVL DSGDLGGSMQ LMYEKLHILS PLVEARNYYF
301: IRYFRKLDEK TWIMVDVSYD LIKEIQSGET SHAWKFPSGC AIQDLEHGES RVTWIEHVQV DEKIPVHNMF LPLLIDRQTY GAKRWIVTLQ RMCERYSVEV
401: GATSLSRHDP KQVLNDPEIL ENIMQISLRM VKRFCEILSM TEKLDFPTSS KFKSEDRVSI RKNEDITQQK GFIITAATSL WLPLSCRNVF NFLKDNNSRC
501: QWDVLAGENT VTELARIETG CVPGNNITII QPYVPEEKNM LILQESAIDE LGAFLIYAPI DLSTVNSIFN GGDVNKVSIL PSGFIICPDG RHNLDTYITK
601: NAQNGSILTM AFQILICHAD NASISLKQQK SAVTSVHNLL SSTVLKIKAT LGCSD
101: KSNTSYESLL SQNISGSSTA YHPPFLQSSN NNNNNNNARA HSISDNISSV MSPSPQENYE FHHNNREKSI ILGILIAALN EMAELLKFDI PISIESSISN
201: EFLFNWENYE EIFSNPNQPG ESPTTRFESS KVYGVVPMNV IELIQNFLDP IKWMNMVPTI VTKARTVEVL DSGDLGGSMQ LMYEKLHILS PLVEARNYYF
301: IRYFRKLDEK TWIMVDVSYD LIKEIQSGET SHAWKFPSGC AIQDLEHGES RVTWIEHVQV DEKIPVHNMF LPLLIDRQTY GAKRWIVTLQ RMCERYSVEV
401: GATSLSRHDP KQVLNDPEIL ENIMQISLRM VKRFCEILSM TEKLDFPTSS KFKSEDRVSI RKNEDITQQK GFIITAATSL WLPLSCRNVF NFLKDNNSRC
501: QWDVLAGENT VTELARIETG CVPGNNITII QPYVPEEKNM LILQESAIDE LGAFLIYAPI DLSTVNSIFN GGDVNKVSIL PSGFIICPDG RHNLDTYITK
601: NAQNGSILTM AFQILICHAD NASISLKQQK SAVTSVHNLL SSTVLKIKAT LGCSD
001: MEFLGDSQNH DSSETEKKNK KKKRFHRHTP HQIQRLESTF NECQHPDEKQ RNQLSRELGL APRQIKFWFQ NRRTQKKAQH ERADNCALKE ENDKIRCENI
101: AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ
201: PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP
301: SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG
401: EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV
501: TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY
601: TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA
101: AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ
201: PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP
301: SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG
401: EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV
501: TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY
601: TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA
Arabidopsis Description
HDG12Uncharacterized protein At1g17920 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.