Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62389 | Canola | cytosol | 85.2 | 52.97 |
| Bra008562.1-P | Field mustard | cytosol, nucleus, plastid | 98.03 | 41.22 |
| CDY53691 | Canola | nucleus | 84.87 | 36.34 |
| Os06t0207966-00 | Rice | plastid | 27.3 | 31.56 |
| CDX89415 | Canola | cytosol, mitochondrion | 17.76 | 30.34 |
| CDX85461 | Canola | cytosol | 68.75 | 29.65 |
| AT1G34650.1 | Thale cress | nucleus | 65.13 | 27.97 |
| Solyc09g060170.1.1 | Tomato | cytosol | 31.58 | 27.91 |
| CDY02713 | Canola | nucleus | 67.76 | 27.88 |
| Solyc09g066070.2.1 | Tomato | cytosol | 38.16 | 26.91 |
| Solyc04g025490.1.1 | Tomato | cytosol | 21.38 | 26.86 |
| AT5G17320.1 | Thale cress | nucleus | 62.83 | 26.6 |
| PGSC0003DMT400085057 | Potato | cytosol | 40.13 | 25.52 |
| PGSC0003DMT400051268 | Potato | cytosol | 39.14 | 23.85 |
| Solyc09g060130.1.1 | Tomato | cytosol | 33.22 | 22.75 |
| Solyc11g022420.1.1 | Tomato | cytosol | 34.54 | 21.92 |
| CDY16938 | Canola | nucleus | 47.37 | 21.82 |
| Solyc10g018030.1.1 | Tomato | cytosol | 29.61 | 21.79 |
| Solyc10g018020.1.1 | Tomato | extracellular | 24.01 | 21.73 |
| Solyc07g026560.1.1 | Tomato | cytosol | 33.55 | 21.56 |
| Solyc09g060140.2.1 | Tomato | mitochondrion | 25.99 | 21.47 |
| Solyc09g057540.2.1 | Tomato | cytosol | 34.54 | 21.13 |
| PGSC0003DMT400051266 | Potato | cytosol | 26.97 | 21.08 |
| PGSC0003DMT400038820 | Potato | extracellular | 24.67 | 20.6 |
| PGSC0003DMT400036411 | Potato | nucleus | 35.53 | 20.57 |
| CDY43137 | Canola | nucleus | 45.39 | 20.03 |
| CDY67945 | Canola | nucleus | 45.39 | 20.03 |
| CDY42301 | Canola | nucleus | 45.39 | 20.0 |
| Solyc09g066050.2.1 | Tomato | cytosol | 36.18 | 19.89 |
| CDY49937 | Canola | nucleus | 45.07 | 19.74 |
| CDY21211 | Canola | nucleus | 44.74 | 19.6 |
| VIT_04s0079g00480.t01 | Wine grape | nucleus | 42.11 | 17.93 |
| CDY44946 | Canola | nucleus | 38.16 | 17.9 |
| Solyc08g062520.2.1 | Tomato | cytosol | 29.93 | 17.81 |
| Solyc04g025480.1.1 | Tomato | cytosol | 38.16 | 17.71 |
| Solyc08g062510.2.1 | Tomato | nucleus | 37.17 | 17.3 |
| KRH11810 | Soybean | nucleus | 40.46 | 17.25 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 38.49 | 17.18 |
| KRH36827 | Soybean | nucleus | 39.8 | 17.07 |
| Solyc09g066030.1.1 | Tomato | nucleus | 38.82 | 16.32 |
| Zm00001d052133_P001 | Maize | nucleus | 36.51 | 15.9 |
| Solyc11g011940.1.1 | Tomato | nucleus | 37.5 | 15.9 |
| Zm00001d018225_P001 | Maize | nucleus | 36.18 | 15.9 |
| EES05874 | Sorghum | nucleus | 36.51 | 15.7 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 34.87 | 15.47 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 34.87 | 15.47 |
| CDX96744 | Canola | nucleus | 34.21 | 15.45 |
| CDX83884 | Canola | nucleus | 34.54 | 15.33 |
| CDX98703 | Canola | nucleus | 34.87 | 15.25 |
| CDX76399 | Canola | nucleus | 35.86 | 15.24 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 34.87 | 15.21 |
| CDY30748 | Canola | endoplasmic reticulum | 29.28 | 15.16 |
| CDY27417 | Canola | nucleus | 35.53 | 15.13 |
| GSMUA_Achr10P... | Banana | nucleus | 35.2 | 15.05 |
| CDX94054 | Canola | nucleus | 34.21 | 14.96 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 36.18 | 14.95 |
| KRH42429 | Soybean | cytosol | 35.86 | 14.93 |
| CDY66622 | Canola | nucleus | 35.53 | 14.77 |
| CDX72984 | Canola | nucleus | 34.54 | 14.69 |
| Zm00001d044973_P001 | Maize | nucleus | 33.22 | 14.66 |
| CDY26205 | Canola | nucleus | 33.22 | 14.64 |
| EER89393 | Sorghum | nucleus | 33.55 | 14.57 |
| CDX96471 | Canola | nucleus | 34.21 | 14.48 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 35.2 | 14.48 |
| KRH36826 | Soybean | nucleus | 33.88 | 14.45 |
| CDX90879 | Canola | nucleus | 33.88 | 14.39 |
| CDY21319 | Canola | nucleus | 33.88 | 14.39 |
| CDY19185 | Canola | nucleus | 32.24 | 14.37 |
| CDX68229 | Canola | nucleus | 33.22 | 14.37 |
| Zm00001d037140_P004 | Maize | nucleus | 32.24 | 14.26 |
| GSMUA_Achr10P... | Banana | nucleus | 31.91 | 14.22 |
| CDY11109 | Canola | nucleus | 32.89 | 14.08 |
| CDX94586 | Canola | nucleus | 33.88 | 14.07 |
| CDY16639 | Canola | nucleus | 33.88 | 14.05 |
| CDX79091 | Canola | nucleus | 33.88 | 13.81 |
| CDY18903 | Canola | nucleus | 31.58 | 13.62 |
| CDY06167 | Canola | nucleus | 32.24 | 13.61 |
| Solyc10g018000.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 31.25 | 13.59 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 32.24 | 13.52 |
| CDY26204 | Canola | nucleus | 28.29 | 13.5 |
| KRH42428 | Soybean | nucleus | 33.55 | 13.47 |
| CDY00515 | Canola | nucleus | 29.61 | 13.37 |
| CDX74762 | Canola | nucleus | 30.92 | 13.28 |
| CDY10041 | Canola | nucleus | 32.57 | 13.25 |
| CDY31916 | Canola | nucleus | 29.28 | 13.22 |
| CDY51143 | Canola | nucleus | 34.21 | 13.16 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 31.58 | 13.15 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 31.58 | 13.11 |
| CDX67855 | Canola | nucleus | 33.55 | 13.08 |
| CDY07201 | Canola | nucleus | 33.88 | 13.07 |
| CDY45684 | Canola | nucleus | 33.55 | 13.01 |
| CDX74347 | Canola | nucleus | 33.55 | 12.86 |
| CDX91894 | Canola | nucleus | 33.55 | 12.85 |
| CDX79408 | Canola | nucleus | 32.89 | 12.82 |
| CDX67929 | Canola | nucleus | 32.57 | 12.64 |
| CDY48272 | Canola | nucleus | 29.28 | 12.64 |
| CDY12213 | Canola | nucleus | 29.28 | 12.5 |
| CDY49515 | Canola | plasma membrane | 32.57 | 12.21 |
| CDX89416 | Canola | nucleus | 25.66 | 12.02 |
| CDY46842 | Canola | nucleus | 32.24 | 11.81 |
| CDY19129 | Canola | nucleus | 27.3 | 11.42 |
| Solyc05g015030.1.1 | Tomato | cytosol | 17.76 | 11.39 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 22.37 | 11.28 |
| CDY15339 | Canola | nucleus | 26.97 | 11.22 |
| CDX76559 | Canola | nucleus | 26.97 | 11.17 |
| CDX94443 | Canola | cytosol | 23.03 | 11.15 |
| CDY08866 | Canola | nucleus | 25.99 | 10.73 |
| CDX77711 | Canola | nucleus | 28.95 | 10.69 |
| CDY43458 | Canola | nucleus | 27.63 | 10.34 |
| CDY03177 | Canola | nucleus | 27.63 | 10.17 |
| CDY33492 | Canola | nucleus | 25.66 | 9.8 |
| CDY42097 | Canola | nucleus | 15.13 | 8.9 |
| Solyc09g057530.1.1 | Tomato | cytosol | 2.63 | 5.84 |
| CDY39874 | Canola | plasma membrane | 1.32 | 2.08 |
| TraesCSU01G150000.1 | Wheat | nucleus | 1.32 | 1.83 |
| HORVU3Hr1G022170.1 | Barley | cytosol | 0.66 | 1.68 |
| CDY23096 | Canola | nucleus | 0.66 | 1.52 |
| TraesCSU01G244000.1 | Wheat | nucleus | 0.99 | 1.46 |
| Solyc07g037910.1.1 | Tomato | cytosol | 0.33 | 0.47 |
| CDY71572 | Canola | nucleus | 0.0 | 0.0 |
| Os06t0208100-00 | Rice | nucleus | 0.0 | 0.0 |
| Solyc07g026570.1.1 | Tomato | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY69499 | EnsemblPlantsGene:GSBRNA2T00088180001 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF504 | ProteinID:CDY69499 | ProteinID:CDY69499.1 |
| SUPFAM:SSF55961 | UniParc:UPI0004EECF69 | UniProt:A0A078JRP7 | MapMan:15.5.3.3 | : | : |
Description
BnaCnng63880DBnaCnng63880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRP7]
Coordinates
chrLK039569:-:1859..3758
Molecular Weight (calculated)
33314.2 Da
IEP (calculated)
6.354
GRAVY (calculated)
-0.057
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHVEVNDKV RSHRIYRDLL CGGFGYGARR WTATLERMCE RLSLYSVSGL PTTDFPGVVD TMDGRKRVMD LGERMSKNFA WILKMPEKSG FSQQTATNSS
101: GVRISVRVNE EVGQPAGLIV CAGLSLCLPL APLQVYNFLK NLEVRHQWDV LCQASPVTEV ARFVTGADNK NCVNILKPSS ATENGALMII QDSFIDALGG
201: MVVYAPVDLR TAHAAFLGNV DPSSIPILPS GFVISRDGRP PSAAELDGGL DNCKTLLTVA FQILVTGPTM FEEDQMNEWT TKVHTLLSST IRRVKGMLNC
301: DDGQ
101: GVRISVRVNE EVGQPAGLIV CAGLSLCLPL APLQVYNFLK NLEVRHQWDV LCQASPVTEV ARFVTGADNK NCVNILKPSS ATENGALMII QDSFIDALGG
201: MVVYAPVDLR TAHAAFLGNV DPSSIPILPS GFVISRDGRP PSAAELDGGL DNCKTLLTVA FQILVTGPTM FEEDQMNEWT TKVHTLLSST IRRVKGMLNC
301: DDGQ
001: MEFLGDSQNH DSSETEKKNK KKKRFHRHTP HQIQRLESTF NECQHPDEKQ RNQLSRELGL APRQIKFWFQ NRRTQKKAQH ERADNCALKE ENDKIRCENI
101: AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ
201: PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP
301: SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG
401: EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV
501: TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY
601: TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA
101: AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ
201: PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP
301: SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG
401: EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV
501: TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY
601: TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA
Arabidopsis Description
HDG12Uncharacterized protein At1g17920 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.