Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003846.1-P | Field mustard | nucleus | 98.72 | 98.44 |
| CDY11109 | Canola | nucleus | 96.87 | 95.92 |
| CDX96471 | Canola | nucleus | 90.9 | 89.0 |
| CDX72984 | Canola | nucleus | 90.04 | 88.53 |
| AT1G73360.1 | Thale cress | nucleus | 86.06 | 83.8 |
| Os06t0208100-00 | Rice | nucleus | 13.51 | 73.64 |
| CDX96744 | Canola | nucleus | 67.57 | 70.58 |
| CDY19185 | Canola | nucleus | 68.42 | 70.53 |
| CDY26205 | Canola | nucleus | 68.42 | 69.71 |
| CDY26204 | Canola | nucleus | 62.87 | 69.39 |
| CDX83884 | Canola | nucleus | 67.28 | 69.05 |
| CDY42097 | Canola | nucleus | 50.36 | 68.47 |
| VIT_17s0053g00780.t01 | Wine grape | nucleus | 65.72 | 65.07 |
| KRH09477 | Soybean | nucleus | 65.86 | 64.48 |
| KRH38939 | Soybean | nucleus | 65.58 | 63.85 |
| Solyc03g098200.2.1 | Tomato | nucleus | 62.73 | 61.16 |
| PGSC0003DMT400069312 | Potato | nucleus | 61.74 | 60.7 |
| Solyc06g072310.2.1 | Tomato | nucleus | 61.45 | 60.25 |
| KRH41898 | Soybean | nucleus | 61.59 | 60.06 |
| KRH60596 | Soybean | nucleus | 60.88 | 60.03 |
| GSMUA_Achr10P... | Banana | nucleus | 55.9 | 55.27 |
| Zm00001d018225_P001 | Maize | nucleus | 53.77 | 54.62 |
| TraesCS6D01G304300.1 | Wheat | nucleus | 53.2 | 54.6 |
| Zm00001d052133_P001 | Maize | nucleus | 54.05 | 54.44 |
| TraesCS6A01G324500.1 | Wheat | nucleus | 52.92 | 54.31 |
| EES05874 | Sorghum | nucleus | 54.2 | 53.89 |
| GSMUA_Achr6P05990_001 | Banana | nucleus | 45.95 | 53.57 |
| TraesCS6B01G354900.3 | Wheat | nucleus | 53.06 | 53.52 |
| Zm00001d044973_P001 | Maize | nucleus | 52.06 | 53.12 |
| GSMUA_Achr2P15140_001 | Banana | nucleus | 55.76 | 53.04 |
| Zm00001d037140_P004 | Maize | nucleus | 51.64 | 52.84 |
| GSMUA_Achr7P11310_001 | Banana | nucleus | 54.91 | 52.45 |
| EER89393 | Sorghum | nucleus | 51.78 | 52.0 |
| Os06t0207966-00 | Rice | plastid | 19.35 | 51.71 |
| GSMUA_Achr10P... | Banana | nucleus | 49.79 | 51.32 |
| TraesCS7A01G167900.1 | Wheat | nucleus | 47.37 | 45.93 |
| TraesCS7D01G168700.1 | Wheat | nucleus | 47.37 | 45.49 |
| TraesCS7B01G072700.1 | Wheat | nucleus | 47.08 | 45.34 |
| CDY21319 | Canola | nucleus | 46.09 | 45.25 |
| CDX90879 | Canola | nucleus | 46.09 | 45.25 |
| CDX76399 | Canola | nucleus | 45.8 | 45.03 |
| CDY06167 | Canola | nucleus | 46.09 | 45.0 |
| CDY27417 | Canola | nucleus | 45.66 | 44.96 |
| CDX98703 | Canola | nucleus | 43.81 | 44.32 |
| CDY16639 | Canola | nucleus | 46.09 | 44.2 |
| CDX94054 | Canola | nucleus | 43.67 | 44.17 |
| CDY66622 | Canola | nucleus | 45.8 | 44.05 |
| CDX94586 | Canola | nucleus | 45.66 | 43.85 |
| CDY10041 | Canola | nucleus | 46.23 | 43.51 |
| CDX79091 | Canola | nucleus | 45.38 | 42.76 |
| CDY18903 | Canola | nucleus | 42.53 | 42.41 |
| CDX74762 | Canola | nucleus | 42.25 | 41.95 |
| CDY71572 | Canola | nucleus | 23.33 | 41.73 |
| CDY07201 | Canola | nucleus | 45.8 | 40.86 |
| CDY31916 | Canola | nucleus | 38.98 | 40.71 |
| CDY51143 | Canola | nucleus | 45.52 | 40.51 |
| CDX74347 | Canola | nucleus | 45.66 | 40.48 |
| CDY00515 | Canola | nucleus | 38.69 | 40.42 |
| CDX91894 | Canola | nucleus | 45.52 | 40.3 |
| CDY23096 | Canola | nucleus | 7.54 | 40.15 |
| CDY49515 | Canola | plasma membrane | 45.95 | 39.83 |
| CDX67855 | Canola | nucleus | 43.95 | 39.62 |
| CDY45684 | Canola | nucleus | 43.95 | 39.41 |
| CDY46842 | Canola | nucleus | 46.09 | 39.04 |
| CDX85461 | Canola | cytosol | 37.84 | 37.73 |
| CDX76559 | Canola | nucleus | 39.12 | 37.47 |
| CDY08866 | Canola | nucleus | 39.12 | 37.36 |
| CDY48272 | Canola | nucleus | 36.98 | 36.93 |
| CDY33492 | Canola | nucleus | 41.68 | 36.81 |
| CDY12213 | Canola | nucleus | 37.27 | 36.8 |
| CDY43458 | Canola | nucleus | 42.39 | 36.7 |
| CDX77711 | Canola | nucleus | 42.67 | 36.45 |
| CDY03177 | Canola | nucleus | 42.53 | 36.2 |
| CDY19129 | Canola | nucleus | 37.27 | 36.04 |
| CDY02713 | Canola | nucleus | 37.7 | 35.86 |
| CDY67945 | Canola | nucleus | 34.99 | 35.7 |
| CDY62389 | Canola | cytosol | 24.75 | 35.58 |
| CDY15339 | Canola | nucleus | 36.98 | 35.57 |
| CDY53691 | Canola | nucleus | 35.85 | 35.49 |
| CDY42301 | Canola | nucleus | 34.71 | 35.36 |
| CDY43137 | Canola | nucleus | 34.57 | 35.27 |
| CDY44946 | Canola | nucleus | 32.01 | 34.72 |
| CDY30748 | Canola | endoplasmic reticulum | 28.88 | 34.58 |
| CDY49937 | Canola | nucleus | 34.14 | 34.58 |
| CDY21211 | Canola | nucleus | 33.85 | 34.29 |
| CDY16938 | Canola | nucleus | 32.15 | 34.24 |
| CDY69499 | Canola | cytosol | 14.37 | 33.22 |
| CDX79408 | Canola | nucleus | 36.27 | 32.69 |
| CDX89415 | Canola | cytosol, mitochondrion | 8.25 | 32.58 |
| CDX67929 | Canola | nucleus | 35.99 | 32.31 |
| CDY39874 | Canola | plasma membrane | 8.11 | 29.69 |
| CDX89416 | Canola | nucleus | 25.6 | 27.73 |
| CDX94443 | Canola | cytosol | 23.9 | 26.75 |
| TraesCSU01G150000.1 | Wheat | nucleus | 8.25 | 26.61 |
| TraesCSU01G244000.1 | Wheat | nucleus | 6.83 | 23.3 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | GO:A0A078BWQ6 | EnsemblPlants:CDX68229 | ProteinID:CDX68229 |
| ProteinID:CDX68229.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00099502001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 |
| PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF490 | SMART:SM00234 | SMART:SM00389 |
| SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0004EE8A6A | SEG:seg |
Description
BnaA07g22690D
Coordinates
chrLK031787:+:4538411..4541195
Molecular Weight (calculated)
76902.1 Da
IEP (calculated)
6.815
GRAVY (calculated)
-0.344
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFVVGGSGS GGGDGGGGSS QRHDASETDR KKKRYHRHTA QQIQRLESSF RECPHPDDKQ RNLLSKELGL APRQIKFWFQ NRRTQLKAQH ERADNSALKA
101: ENDKIRCENI AIREAIKHAI CPNCGGPPVS EDPYLDEQKL RMENAHLRQE LERMSTVASK YMGRPISSHI STLHPMHISP LDLSMTGPSL DFDLLPGSSM
201: SSNFAVSDMD KPIMNDIALT AMDELLRLVH TNEPLWSSAD GSREVLNLGS YENVFPRSSN RGKNHNVRIE ASRSSGIVFM NAMSLVDMFM DSAKWAELFP
301: SIVAASKTLA VVSSGMGGGT HEGALHLMYE EMEVLSPLVA TREFCELRYC QQIEQGSWIV VNVSYHLPQF VSHSHSYRFP SGCLIQDMPN GYSKVTWVEH
401: TETEEKEPVH ELYREMIHKG IAFGAERWVT TLQRMCERFA SLLAPAVSSL GGVIPSPEGK RSMMRLAHRM VSNYCISVSR SNNTRSTVVA ELNDVGVRVT
501: AHKSPEPNGT ILSAATTFWL PNSPQNVFNF LKDERTRPQW DVLSNSNAVQ EVAHIANGSH PGCCISVLRA SSASQSNNML ILQETSIDSS GALVVYSPVD
601: LSALNIAMNG DDTSYIPLLS SGFAISPDGN RNSPSAEQGG ASSSSGYGGG GSLITVGFQI MVSNLPSAKL NMESVETVNN LIGTTVHQIK TGLNNCPSAS
701: TTA
101: ENDKIRCENI AIREAIKHAI CPNCGGPPVS EDPYLDEQKL RMENAHLRQE LERMSTVASK YMGRPISSHI STLHPMHISP LDLSMTGPSL DFDLLPGSSM
201: SSNFAVSDMD KPIMNDIALT AMDELLRLVH TNEPLWSSAD GSREVLNLGS YENVFPRSSN RGKNHNVRIE ASRSSGIVFM NAMSLVDMFM DSAKWAELFP
301: SIVAASKTLA VVSSGMGGGT HEGALHLMYE EMEVLSPLVA TREFCELRYC QQIEQGSWIV VNVSYHLPQF VSHSHSYRFP SGCLIQDMPN GYSKVTWVEH
401: TETEEKEPVH ELYREMIHKG IAFGAERWVT TLQRMCERFA SLLAPAVSSL GGVIPSPEGK RSMMRLAHRM VSNYCISVSR SNNTRSTVVA ELNDVGVRVT
501: AHKSPEPNGT ILSAATTFWL PNSPQNVFNF LKDERTRPQW DVLSNSNAVQ EVAHIANGSH PGCCISVLRA SSASQSNNML ILQETSIDSS GALVVYSPVD
601: LSALNIAMNG DDTSYIPLLS SGFAISPDGN RNSPSAEQGG ASSSSGYGGG GSLITVGFQI MVSNLPSAKL NMESVETVNN LIGTTVHQIK TGLNNCPSAS
701: TTA
001: MSFVVGVGGS GSGSGGDGGG SHHHDGSETD RKKKRYHRHT AQQIQRLESS FKECPHPDEK QRNQLSRELG LAPRQIKFWF QNRRTQLKAQ HERADNSALK
101: AENDKIRCEN IAIREALKHA ICPNCGGPPV SEDPYFDEQK LRIENAHLRE ELERMSTIAS KYMGRPISQL STLHPMHISP LDLSMTSLTG CGPFGHGPSL
201: DFDLLPGSSM AVGPNNNLQS QPNLAISDMD KPIMTGIALT AMEELLRLLQ TNEPLWTRTD GCRDILNLGS YENVFPRSSN RGKNQNFRVE ASRSSGIVFM
301: NAMALVDMFM DCVKWTELFP SIIAASKTLA VISSGMGGTH EGALHLLYEE MEVLSPLVAT REFCELRYCQ QTEQGSWIVV NVSYDLPQFV SHSQSYRFPS
401: GCLIQDMPNG YSKVTWVEHI ETEEKELVHE LYREIIHRGI AFGADRWVTT LQRMCERFAS LSVPASSSRD LGGVILSPEG KRSMMRLAQR MISNYCLSVS
501: RSNNTRSTVV SELNEVGIRV TAHKSPEPNG TVLCAATTFW LPNSPQNVFN FLKDERTRPQ WDVLSNGNAV QEVAHISNGS HPGNCISVLR GSNATHSNNM
601: LILQESSTDS SGAFVVYSPV DLAALNIAMS GEDPSYIPLL SSGFTISPDG NGSNSEQGGA STSSGRASAS GSLITVGFQI MVSNLPTAKL NMESVETVNN
701: LIGTTVHQIK TALSGPTAST TA
101: AENDKIRCEN IAIREALKHA ICPNCGGPPV SEDPYFDEQK LRIENAHLRE ELERMSTIAS KYMGRPISQL STLHPMHISP LDLSMTSLTG CGPFGHGPSL
201: DFDLLPGSSM AVGPNNNLQS QPNLAISDMD KPIMTGIALT AMEELLRLLQ TNEPLWTRTD GCRDILNLGS YENVFPRSSN RGKNQNFRVE ASRSSGIVFM
301: NAMALVDMFM DCVKWTELFP SIIAASKTLA VISSGMGGTH EGALHLLYEE MEVLSPLVAT REFCELRYCQ QTEQGSWIVV NVSYDLPQFV SHSQSYRFPS
401: GCLIQDMPNG YSKVTWVEHI ETEEKELVHE LYREIIHRGI AFGADRWVTT LQRMCERFAS LSVPASSSRD LGGVILSPEG KRSMMRLAQR MISNYCLSVS
501: RSNNTRSTVV SELNEVGIRV TAHKSPEPNG TVLCAATTFW LPNSPQNVFN FLKDERTRPQ WDVLSNGNAV QEVAHISNGS HPGNCISVLR GSNATHSNNM
601: LILQESSTDS SGAFVVYSPV DLAALNIAMS GEDPSYIPLL SSGFTISPDG NGSNSEQGGA STSSGRASAS GSLITVGFQI MVSNLPTAKL NMESVETVNN
701: LIGTTVHQIK TALSGPTAST TA
Arabidopsis Description
HDG11Homeobox-leucine zipper protein HDG11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.