Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13460 | Sorghum | mitochondrion, nucleus | 94.1 | 95.9 |
| Zm00001d000247_P001 | Maize | plasma membrane | 81.41 | 90.13 |
| GSMUA_Achr3P23090_001 | Banana | endoplasmic reticulum, plasma membrane | 65.2 | 78.64 |
| Zm00001d002234_P003 | Maize | nucleus | 76.63 | 76.83 |
| VIT_10s0116g00680.t01 | Wine grape | nucleus | 69.97 | 76.72 |
| GSMUA_Achr8P07310_001 | Banana | mitochondrion, nucleus | 69.6 | 76.31 |
| PGSC0003DMT400061859 | Potato | nucleus | 65.95 | 76.2 |
| Solyc03g031760.2.1 | Tomato | cytosol | 58.79 | 74.4 |
| VIT_12s0059g02310.t01 | Wine grape | nucleus | 70.48 | 74.11 |
| Zm00001d026351_P003 | Maize | nucleus | 78.27 | 73.82 |
| KRH13175 | Soybean | cytosol | 16.33 | 73.45 |
| KRH56105 | Soybean | nucleus | 67.09 | 73.25 |
| PGSC0003DMT400029291 | Potato | nucleus | 63.82 | 72.88 |
| CDX90879 | Canola | nucleus | 65.33 | 72.63 |
| CDX94054 | Canola | nucleus | 63.32 | 72.52 |
| CDX98703 | Canola | nucleus | 63.32 | 72.52 |
| CDY21319 | Canola | nucleus | 65.2 | 72.49 |
| Solyc10g005330.2.1 | Tomato | nucleus | 64.82 | 72.47 |
| KRH27601 | Soybean | nucleus | 66.58 | 72.4 |
| Bra000807.1-P | Field mustard | nucleus | 54.15 | 72.19 |
| KRH25398 | Soybean | plastid | 68.84 | 72.01 |
| KRH77881 | Soybean | nucleus | 66.08 | 71.96 |
| CDY16639 | Canola | nucleus | 66.21 | 71.9 |
| CDX94586 | Canola | nucleus | 66.08 | 71.86 |
| CDY27417 | Canola | nucleus | 64.32 | 71.71 |
| CDX76399 | Canola | nucleus | 64.07 | 71.33 |
| KRH22554 | Soybean | nucleus | 69.97 | 71.32 |
| AT4G04890.1 | Thale cress | nucleus | 66.46 | 71.2 |
| Bra029527.1-P | Field mustard | nucleus | 66.58 | 71.14 |
| KRH26803 | Soybean | nucleus | 69.72 | 71.06 |
| AT1G05230.5 | Thale cress | nucleus | 64.32 | 71.01 |
| GSMUA_Achr11P... | Banana | plastid | 70.23 | 70.85 |
| Bra015401.1-P | Field mustard | nucleus | 63.69 | 70.42 |
| CDY06167 | Canola | nucleus | 63.57 | 70.28 |
| AT4G21750.3 | Thale cress | nucleus | 67.21 | 70.21 |
| Bra032478.1-P | Field mustard | nucleus | 63.32 | 70.1 |
| GSMUA_Achr10P... | Banana | nucleus | 62.94 | 70.07 |
| Bra038757.1-P | Field mustard | nucleus | 63.82 | 70.07 |
| CDY66622 | Canola | nucleus | 64.2 | 69.9 |
| PGSC0003DMT400005277 | Potato | nucleus | 63.94 | 69.44 |
| Bra020872.1-P | Field mustard | nucleus | 64.45 | 68.58 |
| CDX79091 | Canola | nucleus | 64.2 | 68.5 |
| CDY10041 | Canola | nucleus | 63.82 | 68.01 |
| Solyc02g080260.2.1 | Tomato | nucleus | 64.07 | 67.91 |
| Bra013556.1-P | Field mustard | nucleus | 57.66 | 66.52 |
| Zm00001d024701_P001 | Maize | nucleus | 65.58 | 65.5 |
| CDY49515 | Canola | plasma membrane | 64.57 | 63.38 |
| CDY23096 | Canola | nucleus | 10.43 | 62.88 |
| CDY46842 | Canola | nucleus | 64.57 | 61.93 |
| CDY71572 | Canola | nucleus | 30.15 | 61.07 |
| KRG91238 | Soybean | nucleus | 54.02 | 58.82 |
| KRH35579 | Soybean | nucleus | 53.64 | 54.88 |
| Zm00001d018225_P001 | Maize | nucleus | 42.71 | 49.13 |
| Zm00001d044973_P001 | Maize | nucleus | 42.21 | 48.77 |
| Zm00001d037140_P004 | Maize | nucleus | 42.09 | 48.76 |
| Zm00001d052133_P001 | Maize | nucleus | 42.71 | 48.71 |
| Zm00001d040090_P002 | Maize | nucleus | 48.99 | 48.57 |
| VIT_19s0177g00240.t01 | Wine grape | cytosol, mitochondrion | 13.94 | 46.84 |
| Zm00001d026088_P002 | Maize | nucleus | 44.6 | 42.57 |
| Zm00001d021236_P004 | Maize | nucleus | 47.24 | 41.64 |
| Zm00001d040091_P001 | Maize | nucleus | 13.44 | 41.0 |
| KRH22254 | Soybean | cytosol | 25.88 | 38.5 |
| PGSC0003DMT400037397 | Potato | cytosol | 23.62 | 38.29 |
| Zm00001d030069_P004 | Maize | nucleus | 41.21 | 37.1 |
| Solyc10g006420.2.1 | Tomato | cytosol | 24.37 | 36.81 |
| KRH27078 | Soybean | extracellular, golgi, peroxisome | 14.45 | 34.85 |
| Zm00001d019477_P001 | Maize | nucleus | 31.53 | 34.1 |
| Zm00001d004234_P001 | Maize | nucleus | 29.4 | 33.1 |
| Zm00001d043231_P001 | Maize | nucleus | 29.65 | 29.8 |
| Zm00001d004230_P030 | Maize | nucleus | 27.76 | 27.15 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | Gene3D:3.30.530.20 | EntrezGene:542010 | ProteinID:AQK50360.1 | ProteinID:AQK50364.1 |
| EMBL:BT066376 | UniProt:C0PDK7 | ncoils:Coil | ProteinID:DAA34954.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | InterPro:IPR023393 | EMBL:KJ727597 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 |
| PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF513 | SMART:SM00234 | SMART:SM00389 |
| SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI000195C8D5 | EnsemblPlantsGene:Zm00001d049443 |
| EnsemblPlants:Zm00001d049443_P005 | EnsemblPlants:Zm00001d049443_T005 | SEG:seg | : | : | : |
Description
outer cell layer5aHomeobox-leucine zipper protein MERISTEM L1
Coordinates
chr4:-:30518867..30525031
Molecular Weight (calculated)
85613.3 Da
IEP (calculated)
5.620
GRAVY (calculated)
-0.259
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPARRVPPA AMIGRNGFAF GSSSALSLSQ ADLLDSHQLQ QAFQQQLFDQ IPTTTTVDDS SDNLIHGRSD TLVDEFESKS CSENPDGTSG DDGLEEDPNQ
101: RPNKKKRYHR HTQHQIQEME AFFKECPHPD DKQRKELSRE LGLEPLQVKF WFQNKRTQMK NQHERHENAQ LRAENDKLRA ENMRYKEALG TASCPSCGGP
201: AALGEMSFDE HHLRLENARL RDEIDRISGI AAKHVGKPMV SFPVLSSPLA AAAAAARSPL DLAGAYGVQS AAAGLGADHV LFGAGAGDLL RSVSAGQLDA
301: DKPMIVELAV AAMDELLRMA RPDALLWGGG ASAGAQQQQL DEEEYVRTFP AGLGPRQYGL RPEASRDSAV VIMTCDSLIE ILMDANRFAA VFSSIVSRAS
401: THEVLSTGVA GSYNGALQVM SMEFQVPSPL VPTRESYFVR YCKNNPDGTW AVVDVSLDSL RPSPVIKCRR RPSGCLIQEM PNGYSKVTWV EHVEVDDRSV
501: HNLYRPLVNS GLAFGAKRWV GTLDRQCERL ASAMASNIPN GDLGVITSIE GRKSMLKLAE RMVASFCGGV TASAAHQWTT LSGSGAEDVR VMTRKSVDDP
601: GRPPGIVLNA ATSFWLPVPP KRVFDFLRDE TSRSEWDILS NGGAVQEMAH IANGRDHGNC VSLLRVNSAN SNQSNMLILQ ESCTDASGSY VVYAPVDVVA
701: MNVVLNGGDP DYVALLPSGF AILPDGPPPA GAAPSHGEGL DTGGGGSLLT VAFQILVDSV PTAKLSLGSV ATVNSLIACT VERIKAAVCA EAGNPQ
101: RPNKKKRYHR HTQHQIQEME AFFKECPHPD DKQRKELSRE LGLEPLQVKF WFQNKRTQMK NQHERHENAQ LRAENDKLRA ENMRYKEALG TASCPSCGGP
201: AALGEMSFDE HHLRLENARL RDEIDRISGI AAKHVGKPMV SFPVLSSPLA AAAAAARSPL DLAGAYGVQS AAAGLGADHV LFGAGAGDLL RSVSAGQLDA
301: DKPMIVELAV AAMDELLRMA RPDALLWGGG ASAGAQQQQL DEEEYVRTFP AGLGPRQYGL RPEASRDSAV VIMTCDSLIE ILMDANRFAA VFSSIVSRAS
401: THEVLSTGVA GSYNGALQVM SMEFQVPSPL VPTRESYFVR YCKNNPDGTW AVVDVSLDSL RPSPVIKCRR RPSGCLIQEM PNGYSKVTWV EHVEVDDRSV
501: HNLYRPLVNS GLAFGAKRWV GTLDRQCERL ASAMASNIPN GDLGVITSIE GRKSMLKLAE RMVASFCGGV TASAAHQWTT LSGSGAEDVR VMTRKSVDDP
601: GRPPGIVLNA ATSFWLPVPP KRVFDFLRDE TSRSEWDILS NGGAVQEMAH IANGRDHGNC VSLLRVNSAN SNQSNMLILQ ESCTDASGSY VVYAPVDVVA
701: MNVVLNGGDP DYVALLPSGF AILPDGPPPA GAAPSHGEGL DTGGGGSLLT VAFQILVDSV PTAKLSLGSV ATVNSLIACT VERIKAAVCA EAGNPQ
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.