Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81266 | Sorghum | nucleus | 76.24 | 70.09 |
| Zm00001d019477_P001 | Maize | nucleus | 48.8 | 46.88 |
| Zm00001d004230_P030 | Maize | nucleus | 44.13 | 38.33 |
| TraesCS5A01G330200.1 | Wheat | nucleus | 35.08 | 33.33 |
| TraesCS5B01G330300.1 | Wheat | nucleus | 35.36 | 33.29 |
| HORVU5Hr1G083940.3 | Barley | nucleus | 36.35 | 33.12 |
| TraesCS5D01G335900.1 | Wheat | nucleus | 34.94 | 32.8 |
| TraesCS4A01G231300.2 | Wheat | nucleus | 35.64 | 32.64 |
| Zm00001d040090_P002 | Maize | nucleus | 36.92 | 32.5 |
| TraesCS4B01G084700.16 | Wheat | extracellular, golgi | 36.21 | 31.57 |
| TraesCS4D01G082600.1 | Wheat | nucleus | 35.93 | 31.55 |
| Zm00001d021236_P004 | Maize | nucleus | 40.17 | 31.45 |
| Zm00001d018225_P001 | Maize | nucleus | 30.27 | 30.92 |
| Zm00001d052133_P001 | Maize | nucleus | 30.41 | 30.8 |
| Zm00001d044973_P001 | Maize | nucleus | 29.7 | 30.48 |
| Zm00001d037140_P004 | Maize | nucleus | 29.28 | 30.13 |
| Zm00001d002234_P003 | Maize | nucleus | 33.1 | 29.47 |
| Zm00001d049443_P005 | Maize | nucleus | 33.1 | 29.4 |
| Zm00001d024701_P001 | Maize | nucleus | 32.96 | 29.23 |
| Zm00001d026088_P002 | Maize | nucleus | 33.66 | 28.54 |
| Zm00001d026351_P003 | Maize | nucleus | 33.66 | 28.2 |
| Zm00001d000247_P001 | Maize | plasma membrane | 28.57 | 28.09 |
| Os08t0292000-01 | Rice | nucleus | 30.27 | 27.05 |
| Zm00001d040091_P001 | Maize | nucleus | 8.91 | 24.14 |
| Zm00001d043231_P001 | Maize | nucleus | 25.46 | 22.73 |
| Zm00001d030069_P004 | Maize | nucleus | 26.59 | 21.27 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | ncoils:Coil | ProteinID:DAA34961.1 | UniProt:G2J5S6 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0008289 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
| ProteinID:ONM18667.1 | PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF484 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom |
| UniParc:UPI00022073CE | EnsemblPlantsGene:Zm00001d004234 | EnsemblPlants:Zm00001d004234_P001 | EnsemblPlants:Zm00001d004234_T001 | SEG:seg | : |
Description
Homeobox-transcription factor 57Homeodomain leucine zipper family IV protein
Coordinates
chr2:+:94228544..94231577
Molecular Weight (calculated)
77260.0 Da
IEP (calculated)
4.920
GRAVY (calculated)
-0.301
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEGHQNNS SSNEQDHDGF TMDEIPDLSW SSHTEYDVDA LLGAVDQVNT TQTDDDEDQS SHVSEQTPSN RTKRFTMDQI QQLEAQFRVC RHPNLDARQE
101: LAAKTGLEER QVKACGDENK GIRQELGKLK AENEELKQRM LNPICFRCRN PTLATQPTSE KRRLLNENAR LRDEYVRAKA YLDRLIREGA ERRASPSAHL
201: HLGGSATLVS HAERAMEELV MLATKGEPMW LPAMDGETLN HQEYVLQTFP GLLGLCPPGF VEEATRESDT IRGTAMYLVS VLTDANQWCE MFPGTVAYMD
301: AELWVQSPRL LNRSVKFLRF SKKLSNRRWA MADVSVVDGV CGVEPGGSST GCRLLPSGCL LEDMSGGYCK VTWVVHAEYD ETSVPSLFRP FLQSGQALGA
401: YRWLRCLQRQ CEYITVLRSS LVLPSSSSSF SAISTLGVGR RSVMELARRM TASFYAAVSG PVTVPATSSV DEWRVSSGSG AERVEAVVRL AVWNCADIMP
501: GEPAVTVLSA TTTVWLPGTP PMRVREYLFD LQRRGEWDAH ADGGEVQELG SVATSSRLHG NAVSVLQSTS SVDTDGTDSK VLILQETTTD VSCSLVVYSL
601: VEENLMRGIM DGRERSNVFV LPSGFAILPD GHGRAHAGDT AATNSSASAA IDDDHSSNAA GSLVTVAFQT PLPGNPDTGA FEDACLQLCH AIAKIKAAVG
701: ASDIIPV
101: LAAKTGLEER QVKACGDENK GIRQELGKLK AENEELKQRM LNPICFRCRN PTLATQPTSE KRRLLNENAR LRDEYVRAKA YLDRLIREGA ERRASPSAHL
201: HLGGSATLVS HAERAMEELV MLATKGEPMW LPAMDGETLN HQEYVLQTFP GLLGLCPPGF VEEATRESDT IRGTAMYLVS VLTDANQWCE MFPGTVAYMD
301: AELWVQSPRL LNRSVKFLRF SKKLSNRRWA MADVSVVDGV CGVEPGGSST GCRLLPSGCL LEDMSGGYCK VTWVVHAEYD ETSVPSLFRP FLQSGQALGA
401: YRWLRCLQRQ CEYITVLRSS LVLPSSSSSF SAISTLGVGR RSVMELARRM TASFYAAVSG PVTVPATSSV DEWRVSSGSG AERVEAVVRL AVWNCADIMP
501: GEPAVTVLSA TTTVWLPGTP PMRVREYLFD LQRRGEWDAH ADGGEVQELG SVATSSRLHG NAVSVLQSTS SVDTDGTDSK VLILQETTTD VSCSLVVYSL
601: VEENLMRGIM DGRERSNVFV LPSGFAILPD GHGRAHAGDT AATNSSASAA IDDDHSSNAA GSLVTVAFQT PLPGNPDTGA FEDACLQLCH AIAKIKAAVG
701: ASDIIPV
001: MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RSANSSQSNM LILQESCTDP TASFVIYAPV DIVAMNIVLN GGDPDYVALL PSGFAILPDG NANSGAPGGD GGSLLTVAFQ ILVDSVPTAK LSLGSVATVN
701: NLIACTVERI KASMSCETA
101: LNLEPLQVKF WFQNKRTQMK NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL REEIDRISAI AAKYVGKPVS
201: NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA
301: SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP
401: PARCRRRASG CLIQELPNGY SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG VITNQEGRRS MLKLAERMVI
501: SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL
601: RSANSSQSNM LILQESCTDP TASFVIYAPV DIVAMNIVLN GGDPDYVALL PSGFAILPDG NANSGAPGGD GGSLLTVAFQ ILVDSVPTAK LSLGSVATVN
701: NLIACTVERI KASMSCETA
Arabidopsis Description
HDG2AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.