Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98409 | Sorghum | nucleus | 71.6 | 72.19 |
| Zm00001d004234_P001 | Maize | nucleus | 46.88 | 48.8 |
| TraesCS5B01G330300.1 | Wheat | nucleus | 38.18 | 37.42 |
| TraesCS5A01G330200.1 | Wheat | nucleus | 37.5 | 37.1 |
| HORVU5Hr1G083940.3 | Barley | nucleus | 38.86 | 36.86 |
| TraesCS5D01G335900.1 | Wheat | nucleus | 37.64 | 36.79 |
| Zm00001d004230_P030 | Maize | nucleus | 40.35 | 36.49 |
| TraesCS4A01G231300.2 | Wheat | nucleus | 36.55 | 34.84 |
| Zm00001d040090_P002 | Maize | nucleus | 37.5 | 34.37 |
| Zm00001d018225_P001 | Maize | nucleus | 31.66 | 33.67 |
| Zm00001d052133_P001 | Maize | nucleus | 31.93 | 33.67 |
| TraesCS4B01G084700.16 | Wheat | extracellular, golgi | 36.68 | 33.29 |
| Zm00001d044973_P001 | Maize | nucleus | 30.84 | 32.95 |
| TraesCS4D01G082600.1 | Wheat | nucleus | 35.87 | 32.8 |
| Zm00001d021236_P004 | Maize | nucleus | 39.81 | 32.45 |
| Zm00001d037140_P004 | Maize | nucleus | 30.16 | 32.31 |
| Zm00001d026088_P002 | Maize | nucleus | 36.14 | 31.89 |
| Zm00001d049443_P005 | Maize | nucleus | 34.1 | 31.53 |
| Zm00001d024701_P001 | Maize | nucleus | 34.1 | 31.49 |
| Zm00001d002234_P003 | Maize | nucleus | 33.56 | 31.11 |
| Zm00001d000247_P001 | Maize | plasma membrane | 30.03 | 30.74 |
| Zm00001d026351_P003 | Maize | nucleus | 33.7 | 29.38 |
| Os08t0292000-01 | Rice | nucleus | 30.98 | 28.82 |
| Zm00001d040091_P001 | Maize | nucleus | 8.83 | 24.9 |
| Zm00001d030069_P004 | Maize | nucleus | 27.99 | 23.3 |
| Zm00001d043231_P001 | Maize | nucleus | 23.91 | 22.22 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | UniProt:A0A1D6HXN6 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008289 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | ProteinID:ONM52981.1 |
| PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF484 |
| SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | UniParc:UPI0004DE96D8 |
| EnsemblPlantsGene:Zm00001d019477 | EnsemblPlants:Zm00001d019477_P001 | EnsemblPlants:Zm00001d019477_T001 | SEG:seg | : | : |
Description
Homeobox-leucine zipper protein HDG7
Coordinates
chr7:+:35911836..35914971
Molecular Weight (calculated)
79016.2 Da
IEP (calculated)
6.610
GRAVY (calculated)
-0.242
Length
736 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEEQQAND YTDEDTDYTD DEEEDYNDDE DYTPEPETAS KRQKRHTLEQ IRELRAAYQR CDHPDAPTRR ALGAKIGLEG RQVQYWFQNQ RSQTQAKALA
101: QNNRVVQQEN AALMAENASL RHAILTGSCL ACGGATTAAA PAELPPESRR LVAENARLRG EYARATALLN QILLSAPAPP GPAAAAVVVS SSSVARPVAD
201: RAARLRGHAE AAMDQFLLLA TKGEPLWLPT TPDGEALNYQ LGYKHKKALP VHHGLCPDEF VMEASRATGV VRASATYLVA TLTDARRWSE MFPSVVASVT
301: ARRDAAISGG VFGSHIQLMN AELQVHSPRL LNRSINFLRY TKRVAEGRWA VMDVSVDGIL GPPGSRVADA AAAAAAANGV TLVPAWYTGC RLLPSGCLVE
401: DMRNGYCKVT WVVHAEYDET TVPTMFRPLF RSGKALGAHR WLASLQRQCE FLAVLHSSQV SRGGDNTAAA ISSMGKRGVL ELAQRMVADF YSAVSGPVTQ
501: PSSSIDEWYG SAGAGARRTD TAVRMVTSKK AGTVADLVLS ASTTVWLPNT PPQLVFRYLR DDQRRGEWDA FFASSAAVTE LCSVPTGHLN GNAVSVLYSN
601: VTDGTDRKKT LILQEACTDA SCSMVVYAPV EEDSMRAVMN GGDHASVFLL PSGFAVLPDG HGRARHAPSS SSSTPVGCDD TTAGSLLTVA CQALVPGSSP
701: SDNRAAPGAF DDVGKLLCRA LEKIKAAVKT DIVTPA
101: QNNRVVQQEN AALMAENASL RHAILTGSCL ACGGATTAAA PAELPPESRR LVAENARLRG EYARATALLN QILLSAPAPP GPAAAAVVVS SSSVARPVAD
201: RAARLRGHAE AAMDQFLLLA TKGEPLWLPT TPDGEALNYQ LGYKHKKALP VHHGLCPDEF VMEASRATGV VRASATYLVA TLTDARRWSE MFPSVVASVT
301: ARRDAAISGG VFGSHIQLMN AELQVHSPRL LNRSINFLRY TKRVAEGRWA VMDVSVDGIL GPPGSRVADA AAAAAAANGV TLVPAWYTGC RLLPSGCLVE
401: DMRNGYCKVT WVVHAEYDET TVPTMFRPLF RSGKALGAHR WLASLQRQCE FLAVLHSSQV SRGGDNTAAA ISSMGKRGVL ELAQRMVADF YSAVSGPVTQ
501: PSSSIDEWYG SAGAGARRTD TAVRMVTSKK AGTVADLVLS ASTTVWLPNT PPQLVFRYLR DDQRRGEWDA FFASSAAVTE LCSVPTGHLN GNAVSVLYSN
601: VTDGTDRKKT LILQEACTDA SCSMVVYAPV EEDSMRAVMN GGDHASVFLL PSGFAVLPDG HGRARHAPSS SSSTPVGCDD TTAGSLLTVA CQALVPGSSP
701: SDNRAAPGAF DDVGKLLCRA LEKIKAAVKT DIVTPA
001: MNFNGFLDDG AGASKLLSDA PYNNHFSFSA VDTMLGSAAI APSQSLPFSS SGLSLGLQTN GEMSRNGEIM ESNVSRKSSR GEDVESRSES DNAEAVSGDD
101: LDTSDRPLKK KKRYHRHTPK QIQDLESVFK ECAHPDEKQR LDLSRRLNLD PRQVKFWFQN RRTQMKTQIE RHENALLRQE NDKLRAENMS VREAMRNPMC
201: GNCGGPAVIG EISMEEQHLR IENSRLKDEL DRVCALTGKF LGRSNGSHHI PDSALVLGVG VGSGGCNVGG GFTLSSPLLP QASPRFEISN GTGSGLVATV
301: NRQQPVSVSD FDQRSRYLDL ALAAMDELVK MAQTREPLWV RSSDSGFEVL NQEEYDTSFS RCVGPKQDGF VSEASKEAGT VIINSLALVE TLMDSERWAE
401: MFPSMVSRTS TTEIISSGMG GRNGALHLMH AELQLLSPLV PVRQVSFLRF CKQHAEGVWA VVDVSIDSIR EGSSSSCRRL PSGCLVQDMA NGYSKVTWIE
501: HTEYDENHIH RLYRPLLRCG LAFGAHRWMA ALQRQCECLT ILMSSTVSTS TNPSPINCNG RKSMLKLAKR MTDNFCGGVC ASSLQKWSKL NVGNVDEDVR
601: IMTRKSVNNP GEPPGIILNA ATSVWMPVSP RRLFDFLGNE RLRSEWDILS NGGPMKEMAH IAKGHDRSNS VSLLRASAIN ANQSSMLILQ ETSIDAAGAV
701: VVYAPVDIPA MQAVMNGGDS AYVALLPSGF AILPNGQAGT QRCAAEERNS IGNGGCMEEG GSLLTVAFQI LVNSLPTAKL TVESVETVNN LISCTVQKIK
801: AALHCDST
101: LDTSDRPLKK KKRYHRHTPK QIQDLESVFK ECAHPDEKQR LDLSRRLNLD PRQVKFWFQN RRTQMKTQIE RHENALLRQE NDKLRAENMS VREAMRNPMC
201: GNCGGPAVIG EISMEEQHLR IENSRLKDEL DRVCALTGKF LGRSNGSHHI PDSALVLGVG VGSGGCNVGG GFTLSSPLLP QASPRFEISN GTGSGLVATV
301: NRQQPVSVSD FDQRSRYLDL ALAAMDELVK MAQTREPLWV RSSDSGFEVL NQEEYDTSFS RCVGPKQDGF VSEASKEAGT VIINSLALVE TLMDSERWAE
401: MFPSMVSRTS TTEIISSGMG GRNGALHLMH AELQLLSPLV PVRQVSFLRF CKQHAEGVWA VVDVSIDSIR EGSSSSCRRL PSGCLVQDMA NGYSKVTWIE
501: HTEYDENHIH RLYRPLLRCG LAFGAHRWMA ALQRQCECLT ILMSSTVSTS TNPSPINCNG RKSMLKLAKR MTDNFCGGVC ASSLQKWSKL NVGNVDEDVR
601: IMTRKSVNNP GEPPGIILNA ATSVWMPVSP RRLFDFLGNE RLRSEWDILS NGGPMKEMAH IAKGHDRSNS VSLLRASAIN ANQSSMLILQ ETSIDAAGAV
701: VVYAPVDIPA MQAVMNGGDS AYVALLPSGF AILPNGQAGT QRCAAEERNS IGNGGCMEEG GSLLTVAFQI LVNSLPTAKL TVESVETVNN LISCTVQKIK
801: AALHCDST
Arabidopsis Description
HDG1HDG1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Q4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.