Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01587 | Sorghum | nucleus | 74.75 | 77.89 |
| TraesCS3A01G325800.1 | Wheat | nucleus | 44.32 | 51.39 |
| TraesCS3B01G354900.1 | Wheat | nucleus | 44.19 | 51.24 |
| TraesCS3D01G319200.1 | Wheat | nucleus | 43.69 | 50.66 |
| HORVU3Hr1G077690.1 | Barley | nucleus | 42.8 | 50.52 |
| Os01t0788800-01 | Rice | nucleus | 40.03 | 50.4 |
| GSMUA_Achr7P00210_001 | Banana | nucleus | 26.39 | 30.78 |
| Zm00001d002234_P003 | Maize | nucleus | 30.81 | 30.73 |
| Zm00001d049443_P005 | Maize | nucleus | 29.8 | 29.65 |
| Zm00001d026351_P003 | Maize | nucleus | 30.81 | 28.91 |
| Zm00001d018225_P001 | Maize | nucleus | 25.25 | 28.9 |
| Zm00001d037140_P004 | Maize | nucleus | 25.0 | 28.82 |
| Zm00001d044973_P001 | Maize | nucleus | 25.0 | 28.74 |
| Zm00001d024701_P001 | Maize | nucleus | 28.91 | 28.73 |
| Zm00001d040090_P002 | Maize | nucleus | 28.28 | 27.9 |
| Zm00001d052133_P001 | Maize | nucleus | 24.49 | 27.79 |
| Zm00001d000247_P001 | Maize | plasma membrane | 23.99 | 26.43 |
| Zm00001d004234_P001 | Maize | nucleus | 22.73 | 25.46 |
| Zm00001d040091_P001 | Maize | nucleus | 8.33 | 25.29 |
| Zm00001d026088_P002 | Maize | nucleus | 26.01 | 24.7 |
| Zm00001d021236_P004 | Maize | nucleus | 28.03 | 24.58 |
| Zm00001d019477_P001 | Maize | nucleus | 22.22 | 23.91 |
| Zm00001d030069_P004 | Maize | nucleus | 24.49 | 21.95 |
| Zm00001d004230_P030 | Maize | nucleus | 21.84 | 21.25 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | UniProt:A0A1D6N9M4 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | ProteinID:ONM37245.1 | PFAM:PF00046 | PFAM:PF01852 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF343 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
| SUPFAM:SSF55961 | InterPro:START_lipid-bd_dom | UniParc:UPI000842BB60 | EnsemblPlantsGene:Zm00001d043231 | EnsemblPlants:Zm00001d043231_P001 | EnsemblPlants:Zm00001d043231_T001 |
| SEG:seg | : | : | : | : | : |
Description
Homeobox-transcription factor 118Homeodomain leucine zipper family IV protein
Coordinates
chr3:-:192587492..192592698
Molecular Weight (calculated)
86235.9 Da
IEP (calculated)
6.883
GRAVY (calculated)
-0.289
Length
792 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRDESSGGE PSFIEPTSGM DDPTLMGSLG GIDGPSLMEP FGRVGGGTSS QTSDIPENGS SNQSVEAHAN NGKRESPGDG AARINEVNSS TAVKKKKKRS
101: DRQQQDGPQP KKLLHRVTSQ QLEILEGFFS ICAHPDDSQR KQLSESTGLS VHQVKFWFQN KRTHVKHLSG REENYRLKVE NEMLKEENNR LIRQAQSNAP
201: APAPAPCPRC INDAGHLLLE KEVERLKALN QMLQQELQLQ GTEGETPVAV DPASGAFHPD PEPSLENVFA AQHDGQMLAK LAENAAQELL VLADPESPLW
301: LPVPGGSFET LNMIAYAQTF PGQMSVDAIA LKTEATRASG VVMLDPKSLV EFLMDAESYG TMFPGLVSGA ATDKVYNWPT SREESYDGAV QMMTVELAFP
401: SPLVAARKCT FVRCCKKLEQ GAFAVVDVSL DDGARCRKMP SGMLIQPIRY NSCKVSAIDH VRVDDTSIHD IFHPCLSGVL FGARRWVTSM ARQCARIRDV
501: FHVTNSCLTY YLMRMRLSLF TFTSSHRIVV SVTSRGRKTI MKLADNLLAD YTSSVAAFPD DAWTVQCGVG TEQDIKIMYK RQSEGSSSSS NTAVVCACAS
601: FLLPLRMRKA FDLLKNNLLR AKWDVLVNGG SVKEEVRVAN GVGSDDAVSI LHVKHGHGAN RDTMMILQNS SYDASGSFMV YSSLDKQLVE TITNPGDSQA
701: MSSINLFPAG FSLVPLTNPD PAPQEGSGSI AQPGATVMTA GFQILMKMAR GTGLCPRSVS SAVKIMSDNI TNIKDALLKS HPVFYKSIQS VD
101: DRQQQDGPQP KKLLHRVTSQ QLEILEGFFS ICAHPDDSQR KQLSESTGLS VHQVKFWFQN KRTHVKHLSG REENYRLKVE NEMLKEENNR LIRQAQSNAP
201: APAPAPCPRC INDAGHLLLE KEVERLKALN QMLQQELQLQ GTEGETPVAV DPASGAFHPD PEPSLENVFA AQHDGQMLAK LAENAAQELL VLADPESPLW
301: LPVPGGSFET LNMIAYAQTF PGQMSVDAIA LKTEATRASG VVMLDPKSLV EFLMDAESYG TMFPGLVSGA ATDKVYNWPT SREESYDGAV QMMTVELAFP
401: SPLVAARKCT FVRCCKKLEQ GAFAVVDVSL DDGARCRKMP SGMLIQPIRY NSCKVSAIDH VRVDDTSIHD IFHPCLSGVL FGARRWVTSM ARQCARIRDV
501: FHVTNSCLTY YLMRMRLSLF TFTSSHRIVV SVTSRGRKTI MKLADNLLAD YTSSVAAFPD DAWTVQCGVG TEQDIKIMYK RQSEGSSSSS NTAVVCACAS
601: FLLPLRMRKA FDLLKNNLLR AKWDVLVNGG SVKEEVRVAN GVGSDDAVSI LHVKHGHGAN RDTMMILQNS SYDASGSFMV YSSLDKQLVE TITNPGDSQA
701: MSSINLFPAG FSLVPLTNPD PAPQEGSGSI AQPGATVMTA GFQILMKMAR GTGLCPRSVS SAVKIMSDNI TNIKDALLKS HPVFYKSIQS VD
001: MYHPNMFESH HMFDMTPKST SDNDLGITGS REDDFETKSG TEVTTENPSG EELQDPSQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRDLN
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
101: LEPLQVKFWF QNKRTQMKAQ SERHENQILK SDNDKLRAEN NRYKEALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLGSS
201: FAPLAIHAPS RSLDLEVGNF GNQTGFVGEM YGTGDILRSV SIPSETDKPI IVELAVAAME ELVRMAQTGD PLWLSTDNSV EILNEEEYFR TFPRGIGPKP
301: LGLRSEASRQ SAVVIMNHIN LVEILMDVNQ WSCVFSGIVS RALTLEVLST GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GSWAVVDVSL
401: DSLRPSTPIL RTRRRPSGCL IQELPNGYSK VTWIEHMEVD DRSVHNMYKP LVQSGLAFGA KRWVATLERQ CERLASSMAS NIPGDLSVIT SPEGRKSMLK
501: LAERMVMSFC SGVGASTAHA WTTMSTTGSD DVRVMTRKSM DDPGRPPGIV LSAATSFWIP VAPKRVFDFL RDENSRKEWD ILSNGGMVQE MAHIANGHEP
601: GNCVSLLRVN SGNSSQSNML ILQESCTDAS GSYVIYAPVD IVAMNVVLSG GDPDYVALLP SGFAILPDGS VGGGDGNQHQ EMVSTTSSGS CGGSLLTVAF
701: QILVDSVPTA KLSLGSVATV NSLIKCTVER IKAAVSCDVG GGA
Arabidopsis Description
PDF2Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.