Factsheet for HORVU7Hr1G103020.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G103010.2	Barley	cytosol, mitochondrion, nucleus	64.18	100.0
HORVU7Hr1G035250.1	Barley	nucleus	33.33	44.97
HORVU0Hr1G006920.1	Barley	nucleus	16.92	34.34
HORVU3Hr1G022070.1	Barley	nucleus	23.38	24.87
HORVU1Hr1G005430.1	Barley	nucleus	24.88	22.94
HORVU7Hr1G035230.2	Barley	nucleus	61.19	16.53
HORVU6Hr1G079410.6	Barley	nucleus	57.21	15.86
HORVU3Hr1G022160.1	Barley	cytosol	7.96	14.55
HORVU3Hr1G022170.1	Barley	cytosol	8.46	14.29
HORVU2Hr1G106970.2	Barley	nucleus, plastid	44.78	11.58
HORVU7Hr1G073440.1	Barley	nucleus	45.77	11.56
HORVU7Hr1G073450.1	Barley	mitochondrion, nucleus	44.78	11.31
HORVU6Hr1G065300.3	Barley	nucleus	43.78	11.0
HORVU2Hr1G095210.1	Barley	nucleus	41.79	10.77
HORVU5Hr1G080700.2	Barley	nucleus	43.78	10.32
HORVU3Hr1G073290.1	Barley	nucleus	33.33	10.21
HORVU1Hr1G050620.2	Barley	nucleus	42.29	9.6
HORVU3Hr1G077690.1	Barley	nucleus	29.85	8.94
HORVU5Hr1G083940.3	Barley	nucleus	29.35	7.6
HORVU3Hr1G108430.1	Barley	cytosol	10.45	6.31
HORVU7Hr1G036950.2	Barley	cytosol	4.98	5.46
HORVU0Hr1G013510.1	Barley	cytosol	2.99	4.32
HORVU4Hr1G062510.2	Barley	cytosol	3.48	2.53

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.3	UniProt:A0A287XMJ6	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
EnsemblPlantsGene:HORVU7Hr1G103020	EnsemblPlants:HORVU7Hr1G103020.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF490	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000B488646

Description

No Description!

Coordinates

chrchr7H:+:612916031..612918480

Molecular Weight (calculated)

22727.6 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.964

Length

201 amino acids

Sequence
(BLAST)

001: MDSGDDQQLQ EQGQKNYHRH TPSQIQALEA AFMQCSHPDE TQRAMLGRDL GLEPRKVKYW FQNRRTQKKV QQERQGNDFL RAENDRIRCE NIALRDALQN
101: AVCPSCGPPV AEDYYDEQQL RVENARLKEE LAGLTYKPLG RPFTQMPQGT PQMSMATVQM GGHHQPFGRA GLSLDLYLSG AGMSEGCGQE DSGAHFSTNR
201: Q

Best Arabidopsis Sequence Match ( AT1G17920.1 )
(BLAST)

001: MEFLGDSQNH DSSETEKKNK KKKRFHRHTP HQIQRLESTF NECQHPDEKQ RNQLSRELGL APRQIKFWFQ NRRTQKKAQH ERADNCALKE ENDKIRCENI
101: AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ
201: PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP
301: SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG
401: EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV
501: TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY
601: TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA

Arabidopsis Description

HDG12Uncharacterized protein At1g17920 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.