Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400062470 | Potato | cytosol, nucleus, plastid | 28.01 | 60.53 |
| PGSC0003DMT400062468 | Potato | cytosol | 31.35 | 57.7 |
| PGSC0003DMT400028197 | Potato | cytosol | 28.31 | 55.86 |
| PGSC0003DMT400076898 | Potato | cytosol | 41.25 | 54.75 |
| PGSC0003DMT400095329 | Potato | cytosol | 22.83 | 54.35 |
| PGSC0003DMT400042908 | Potato | nucleus | 40.64 | 53.61 |
| PGSC0003DMT400080861 | Potato | nucleus | 35.31 | 50.54 |
| PGSC0003DMT400076902 | Potato | nucleus | 50.23 | 49.25 |
| PGSC0003DMT400095083 | Potato | cytosol | 8.98 | 48.76 |
| PGSC0003DMT400028195 | Potato | nucleus | 27.85 | 48.03 |
| PGSC0003DMT400092271 | Potato | nucleus | 19.33 | 47.92 |
| PGSC0003DMT400037055 | Potato | nucleus | 45.36 | 36.7 |
| KRH35356 | Soybean | nucleus | 42.01 | 36.08 |
| PGSC0003DMT400071377 | Potato | nucleus | 44.9 | 35.93 |
| KRG91457 | Soybean | nucleus | 42.01 | 35.52 |
| Bra028295.1-P | Field mustard | nucleus | 36.83 | 35.48 |
| CDY31916 | Canola | nucleus | 35.92 | 35.07 |
| CDY00515 | Canola | nucleus | 35.92 | 35.07 |
| PGSC0003DMT400029291 | Potato | nucleus | 36.99 | 34.86 |
| PGSC0003DMT400019986 | Potato | nucleus | 42.92 | 34.86 |
| PGSC0003DMT400048971 | Potato | nucleus | 29.83 | 34.51 |
| PGSC0003DMT400061859 | Potato | nucleus | 35.92 | 34.25 |
| KRH38560 | Soybean | nucleus | 39.42 | 33.38 |
| PGSC0003DMT400005277 | Potato | nucleus | 37.14 | 33.29 |
| KRH09109 | Soybean | plastid | 38.97 | 33.03 |
| CDX89415 | Canola | cytosol, mitochondrion | 8.68 | 32.02 |
| PGSC0003DMT400069312 | Potato | nucleus | 34.4 | 31.61 |
| PGSC0003DMT400094124 | Potato | nucleus | 33.33 | 28.97 |
| CDY39874 | Canola | plasma membrane | 8.37 | 28.65 |
| PGSC0003DMT400085057 | Potato | cytosol | 20.09 | 27.62 |
| PGSC0003DMT400006770 | Potato | nucleus | 32.42 | 27.59 |
| Bra013898.1-P | Field mustard | nucleus | 25.72 | 27.13 |
| CDX89416 | Canola | nucleus | 26.79 | 27.12 |
| PGSC0003DMT400033830 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 14.46 | 26.99 |
| PGSC0003DMT400006155 | Potato | nucleus | 31.2 | 26.83 |
| PGSC0003DMT400038820 | Potato | extracellular | 14.61 | 26.37 |
| CDX94443 | Canola | cytosol | 24.96 | 26.11 |
| PGSC0003DMT400051268 | Potato | cytosol | 19.48 | 25.65 |
| PGSC0003DMT400051266 | Potato | cytosol | 14.76 | 24.94 |
| PGSC0003DMT400034503 | Potato | cytosol, nucleus | 24.35 | 23.49 |
| PGSC0003DMT400037397 | Potato | cytosol | 17.2 | 23.01 |
| PGSC0003DMT400036411 | Potato | nucleus | 18.26 | 22.86 |
| AT5G07260.1 | Thale cress | cytosol | 17.66 | 21.44 |
| AT4G26920.1 | Thale cress | cytosol, plasma membrane, plastid | 13.55 | 19.31 |
| VIT_13s0067g01580.t01 | Wine grape | nucleus | 3.2 | 18.75 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | UniProt:M1DAV1 | PFAM:PF00046 |
| PFAM:PF01852 | EnsemblPlantsGene:PGSC0003DMG400035606 | PGSC:PGSC0003DMG400035606 | EnsemblPlants:PGSC0003DMT400086035 | PFscan:PS50071 | PFscan:PS50848 |
| PANTHER:PTHR24326 | PANTHER:PTHR24326:SF320 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 |
| InterPro:START_lipid-bd_dom | UniParc:UPI000296427F | : | : | : | : |
Description
Homeobox protein [Source:PGSC_GENE;Acc:PGSC0003DMG400035606]
Coordinates
chr10:+:40558048..40561685
Molecular Weight (calculated)
74436.5 Da
IEP (calculated)
6.081
GRAVY (calculated)
-0.390
Length
657 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDQKDMSEK ENENELVSGD ELDSQRGKSS KRMKHSDKQI QELEVAFKED RYPDATIRLE LATKLSMGSK QVNYWFQNKR SRMKSQSEQH ESKLLKQEYD
101: KLHTEYISMK EMMKSPTCGQ CHGKTISMNI NVDEHQLKNE QAQLEDEVKR LTNEVEKLYD PTTSLEGTFD KSTLLNLALD ASDELLKLAQ NGEPLWFRNL
201: DGDGETLNLK EYDSAFTPII SMKPEHFITE ATRATCKMVH NSQTLVETLM NKDQWMDMFP CIVGKTNTIE VISRGISGNK SGALLLIVSE LQIISDMIPS
301: CEIKCLRFCQ KHAEGLWVVV DVSIDTIQKG SQQCEIQSCR RLPSGCIIQD MVDGYSKVIW IEHMQYNENH VHHLYRPLVK TGLVFGAQRC IAGLQRQSEF
401: LRVMKSFVDP TIVSKDHIGI RMLAQSMTRK FCAAVCATTH KWEIVQLENG VDAKLMMRTS IGDHTEPIGI VLCAIKTIRL PVKQQHLFEF FINNKTRSQW
501: DVLSCNGPIQ ELVRVSKDQN LESSIYLLRA DGDSTSAKQN NMLIFQDTCT DTTGSLLVYA TVGSQDINMV MKEGDSSFVG LLPNGISIVQ DYSAVDNDND
601: IFEKNDNGVY GGSLVTIGFQ MLLENLATTS LPKQSIKEAN DLICHTIRKI KMALKCK
101: KLHTEYISMK EMMKSPTCGQ CHGKTISMNI NVDEHQLKNE QAQLEDEVKR LTNEVEKLYD PTTSLEGTFD KSTLLNLALD ASDELLKLAQ NGEPLWFRNL
201: DGDGETLNLK EYDSAFTPII SMKPEHFITE ATRATCKMVH NSQTLVETLM NKDQWMDMFP CIVGKTNTIE VISRGISGNK SGALLLIVSE LQIISDMIPS
301: CEIKCLRFCQ KHAEGLWVVV DVSIDTIQKG SQQCEIQSCR RLPSGCIIQD MVDGYSKVIW IEHMQYNENH VHHLYRPLVK TGLVFGAQRC IAGLQRQSEF
401: LRVMKSFVDP TIVSKDHIGI RMLAQSMTRK FCAAVCATTH KWEIVQLENG VDAKLMMRTS IGDHTEPIGI VLCAIKTIRL PVKQQHLFEF FINNKTRSQW
501: DVLSCNGPIQ ELVRVSKDQN LESSIYLLRA DGDSTSAKQN NMLIFQDTCT DTTGSLLVYA TVGSQDINMV MKEGDSSFVG LLPNGISIVQ DYSAVDNDND
601: IFEKNDNGVY GGSLVTIGFQ MLLENLATTS LPKQSIKEAN DLICHTIRKI KMALKCK
001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTSI TPGGRKSMLK LAQRMTFNFC SGISAPSVHN WSKLTVGNVD
601: PDVRVMTRKS VDDPGEPPGI VLSAATSVWL PAAPQRLYDF LRNERMRCEW DILSNGGPMQ EMAHITKGQD QGVSLLRSNA MNANQSSMLI LQETCIDASG
701: ALVVYAPVDI PAMHVVMNGG DSSYVALLPS GFAVLPDGGI DGGGSGDGDQ RPVGGGSLLT VAFQILVNNL PTAKLTVESV ETVNNLISCT VQKIRAALQC
801: ES
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTSI TPGGRKSMLK LAQRMTFNFC SGISAPSVHN WSKLTVGNVD
601: PDVRVMTRKS VDDPGEPPGI VLSAATSVWL PAAPQRLYDF LRNERMRCEW DILSNGGPMQ EMAHITKGQD QGVSLLRSNA MNANQSSMLI LQETCIDASG
701: ALVVYAPVDI PAMHVVMNGG DSSYVALLPS GFAVLPDGGI DGGGSGDGDQ RPVGGGSLLT VAFQILVNNL PTAKLTVESV ETVNNLISCT VQKIRAALQC
801: ES
Arabidopsis Description
ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.