Factsheet for VIT_13s0067g01580.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0018g02100.t01	Wine grape	nucleus	41.96	61.04
PGSC0003DMT400092271	Potato	nucleus	20.54	8.68
PGSC0003DMT400028195	Potato	nucleus	21.43	6.3
VIT_15s0048g02000.t01	Wine grape	nucleus	42.86	5.92
Solyc03g026070.2.1	Tomato	nucleus	40.18	5.58
PGSC0003DMT400037055	Potato	nucleus	40.18	5.54
PGSC0003DMT400080861	Potato	nucleus	22.32	5.45
VIT_10s0116g00680.t01	Wine grape	nucleus	33.04	5.1
VIT_09s0002g04340.t01	Wine grape	nucleus	32.14	4.8
VIT_16s0100g00670.t01	Wine grape	nucleus	33.04	4.73
PGSC0003DMT400042908	Potato	nucleus	20.54	4.62
VIT_02s0012g02030.t01	Wine grape	nucleus	32.14	4.51
VIT_12s0059g02310.t01	Wine grape	nucleus	28.57	4.23
VIT_17s0053g00780.t01	Wine grape	nucleus	25.89	4.08
VIT_04s0079g00480.t01	Wine grape	nucleus	25.0	3.92
PGSC0003DMT400076902	Potato	nucleus	21.43	3.58
Solyc06g050160.2.1	Tomato	nucleus	18.75	3.22
PGSC0003DMT400086035	Potato	nucleus	18.75	3.2
Solyc06g035940.2.1	Tomato	nucleus	17.86	2.96
AT5G07260.1	Thale cress	cytosol	2.68	0.55
PGSC0003DMT400076898	Potato	cytosol	0.0	0.0
PGSC0003DMT400062470	Potato	cytosol, nucleus, plastid	0.0	0.0
PGSC0003DMT400062468	Potato	cytosol	0.0	0.0
PGSC0003DMT400028197	Potato	cytosol	0.0	0.0
AT4G26920.1	Thale cress	cytosol, plasma membrane, plastid	0.0	0.0
VIT_19s0177g00240.t01	Wine grape	cytosol, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	ProteinID:CCB49842	ProteinID:CCB49842.1	UniProt:F6HC88	EMBL:FN595514
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF00046
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF487	SUPFAM:SSF46689	UniParc:UPI0002107F06	ArrayExpress:VIT_13s0067g01580
EnsemblPlantsGene:VIT_13s0067g01580	EnsemblPlants:VIT_13s0067g01580.t01	:	:	:	:

Description

No Description!

Coordinates

chr13:+:892004..892520

Molecular Weight (calculated)

13305.7 Da

IEP (calculated)

8.774

GRAVY (calculated)

-1.113

Length

112 amino acids

Sequence
(BLAST)

001: MRNFFSFFLW DWSRLGGMWG GFKREGVVGR ASHKLEREDE HESRSGTNNM DGASGDDQDA INNPPRKKRY HRHTPRQIQE LEALFKECLH PDEKQMLELN
101: KRLCLETRQV KF

Best Arabidopsis Sequence Match ( AT4G00730.2 )
(BLAST)

001: MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV
101: NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL
201: LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG
301: GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW
401: TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK
501: VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS SVTSHDNTCP FLTHLSLCLT

Arabidopsis Description

ANL2Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.