Factsheet for GSMUA_Achr6P20850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr5P25020_001	plasma membrane
GSMUA_Achr6P20850_001	plasma membrane
GSMUA_Achr9P01200_001	plasma membrane
GSMUA_Achr9P15600_001
GSMUA_Achr9P29230_001	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13160.1	GSMUA_Achr9P15600_001	AT1G71020.1	21798944
AT5G13160.1	GSMUA_Achr5P25020_001	AT5G13160.1	24225654
AT5G13160.1	GSMUA_Achr6P20850_001	AT5G13160.1	24225654
AT5G13160.1	GSMUA_Achr9P01200_001	AT5G13160.1	24225654
AT5G13160.1	GSMUA_Achr9P29230_001	AT5G13160.1	24225654

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P01200_001	Banana	cytosol	53.88	88.03
GSMUA_Achr9P29230_001	Banana	cytosol	77.37	82.91
GSMUA_Achr5P25020_001	Banana	cytosol	65.73	71.6
GSMUA_Achr6P15480_001	Banana	cytosol	57.11	68.65
GSMUA_Achr8P00160_001	Banana	cytosol	61.64	68.42
VIT_01s0146g00250.t01	Wine grape	cytosol	67.67	67.67
GSMUA_Achr10P...	Banana	cytosol	56.25	67.44
CDX85669	Canola	cytosol	61.85	66.44
GSMUA_Achr3P08930_001	Banana	cytosol	61.42	66.43
CDX91145	Canola	cytosol	61.85	66.28
KRH36361	Soybean	cytosol	65.52	66.09
KRG93133	Soybean	cytosol	65.95	65.67
Solyc05g024290.2.1	Tomato	cytosol	65.3	65.16
Bra023393.1-P	Field mustard	cytosol	62.93	64.75
Bra006184.1-P	Field mustard	cytosol	61.64	64.71
KRH46858	Soybean	cytosol	65.3	64.61
CDX78510	Canola	cytosol	61.42	64.33
PGSC0003DMT400021929	Potato	cytosol	64.87	64.32
AT5G13160.1	Thale cress	cytosol	63.15	64.25
Bra008851.1-P	Field mustard	cytosol	62.93	64.18
CDX69664	Canola	cytosol	62.93	64.18
CDX97232	Canola	cytosol	62.93	64.18
GSMUA_Achr2P06850_001	Banana	cytosol	60.99	63.88
GSMUA_Achr10P...	Banana	cytosol	58.62	63.85
GSMUA_Achr9P17690_001	Banana	cytosol, nucleus, plastid	37.5	62.14
GSMUA_Achr5P29320_001	Banana	cytosol	48.49	61.64
GSMUA_Achr8P21930_001	Banana	cytosol, nucleus, plastid	61.85	60.93
GSMUA_Achr4P25510_001	Banana	cytosol	33.62	60.23
GSMUA_AchrUn_...	Banana	cytosol	45.69	59.22
CDY53627	Canola	cytosol	62.28	58.74
GSMUA_Achr6P15570_001	Banana	cytosol	47.84	58.12
GSMUA_Achr10P...	Banana	cytosol, plastid	53.23	57.98
GSMUA_Achr5P14180_001	Banana	cytosol, mitochondrion, plastid	42.67	57.39
GSMUA_Achr8P02730_001	Banana	cytosol	45.69	56.84
GSMUA_Achr9P23970_001	Banana	cytosol	45.91	56.65
GSMUA_Achr10P...	Banana	cytosol	55.39	56.48
GSMUA_Achr1P02780_001	Banana	cytosol	45.26	55.7
GSMUA_Achr3P23170_001	Banana	cytosol	48.06	54.66
GSMUA_Achr11P...	Banana	cytosol	49.57	54.5
GSMUA_AchrUn_...	Banana	plasma membrane	55.39	54.33
GSMUA_Achr4P18960_001	Banana	plasma membrane, plastid	48.49	51.96
GSMUA_Achr9P24960_001	Banana	cytosol	50.22	50.98
GSMUA_Achr8P03680_001	Banana	cytosol	47.41	44.0
GSMUA_Achr11P...	Banana	plastid	36.85	40.05
GSMUA_Achr5P26460_001	Banana	cytosol	50.22	29.64
GSMUA_Achr11P...	Banana	nucleus	46.12	15.47

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G20850_001	EnsemblPlants:GSMUA_Achr6P20850_001	EnsemblPlants:GSMUA_Achr6T20850_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0T8T3	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF100	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295BAEF	:	:	:	:

Description

Serine/threonine-protein kinase PBS1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G20850_001]

Coordinates

chr6:+:15929948..15936835

Molecular Weight (calculated)

51264.5 Da

IEP (calculated)

6.651

GRAVY (calculated)

-0.553

Length

464 amino acids

Sequence
(BLAST)

001: MGCFPCFESE EAAQLSHVND CDRKREEQPM VAPPVEKLSS GDDRIRTRND VNEKKESLGP KEGSDFAISA HTFTFRELSY ATGNFRAESL LGEGGFGRVY
101: RGRLETTGQV VAVKQLDRNG LQGNREFLVE VLMLSMLHHP NLVNLIGYCA DGDQRLLVYE YMSMGSLEDH LHDLPPDKEP LDWNTRMKIA AGAAKGLEYL
201: HNKASPPVIY RDLKSSNILL DKGFHPKLSD FGLAKLGPVG DKSHVSTRVM GTYGYCAPEY AMTGQLTVKS DIYSFGVVLL ELITGRKAVE TTKSHAEQNL
301: VSWARPMFND RRKLPSLADP KLQGRYPMRG VYQALAVASM CIQEEAASRP AIADVVTALS YLASQAYDPG TCPTSNNRPG GERRNRSADE GGGRTPALNS
401: DAETAHNWQM NGENTSKETS ANVRQGFDRE RALAEAKIWG ENWREKTQAK ANAEENFHVA SAIG

Best Arabidopsis Sequence Match ( AT5G13160.1 )
(BLAST)

001: MGCFSCFDSS DDEKLNPVDE SNHGQKKQSQ PTVSNNISGL PSGGEKLSSK TNGGSKRELL LPRDGLGQIA AHTFAFRELA AATMNFHPDT FLGEGGFGRV
101: YKGRLDSTGQ VVAVKQLDRN GLQGNREFLV EVLMLSLLHH PNLVNLIGYC ADGDQRLLVY EFMPLGSLED HLHDLPPDKE ALDWNMRMKI AAGAAKGLEF
201: LHDKANPPVI YRDFKSSNIL LDEGFHPKLS DFGLAKLGPT GDKSHVSTRV MGTYGYCAPE YAMTGQLTVK SDVYSFGVVF LELITGRKAI DSEMPHGEQN
301: LVAWARPLFN DRRKFIKLAD PRLKGRFPTR ALYQALAVAS MCIQEQAATR PLIADVVTAL SYLANQAYDP SKDDSRRNRD ERGARLITRN DDGGGSGSKF
401: DLEGSEKEDS PRETARILNR DINRERAVAE AKMWGESLRE KRRQSEQGTS ESNSTG

Arabidopsis Description

PBS1AvrPphB susceptible 1 [Source:UniProtKB/TrEMBL;Acc:B2BDM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.