Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os10t0512800-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G71020.1 | Os10t0512800-01 | AT4G39050.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07310 | Sorghum | cytosol | 83.83 | 83.7 |
| TraesCS6D01G274500.1 | Wheat | cytosol | 82.26 | 81.75 |
| TraesCS6B01G324000.1 | Wheat | cytosol | 82.42 | 81.65 |
| TraesCS6A01G293600.1 | Wheat | cytosol | 81.95 | 81.44 |
| Zm00001d000381_P001 | Maize | cytosol | 81.48 | 81.35 |
| HORVU6Hr1G073280.1 | Barley | cytosol | 81.16 | 64.38 |
| KRG89279 | Soybean | cytosol | 53.06 | 51.92 |
| VIT_01s0011g04770.t01 | Wine grape | cytosol | 51.65 | 51.49 |
| KRH50347 | Soybean | nucleus | 52.75 | 51.38 |
| Bra012355.1-P | Field mustard | plasma membrane | 47.25 | 51.19 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 47.1 | 51.02 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 48.35 | 50.57 |
| CDY21412 | Canola | cytosol, endoplasmic reticulum | 48.19 | 50.49 |
| CDY12497 | Canola | cytosol | 47.25 | 50.42 |
| Bra024559.1-P | Field mustard | cytosol, plasma membrane | 48.19 | 50.41 |
| GSMUA_Achr9P15600_001 | Banana | cytosol | 53.06 | 50.0 |
| AT1G71020.1 | Thale cress | cytosol | 49.14 | 49.84 |
| AT1G23030.1 | Thale cress | cytosol | 47.72 | 49.67 |
| PGSC0003DMT400015349 | Potato | cytosol | 50.39 | 49.61 |
| CDX96295 | Canola | cytosol, plasma membrane | 47.88 | 49.51 |
| Bra016165.1-P | Field mustard | cytosol, plasma membrane | 47.72 | 49.35 |
| Solyc04g007640.2.1 | Tomato | cytosol | 49.92 | 49.15 |
| CDX72769 | Canola | cytosol | 46.62 | 48.53 |
| PGSC0003DMT400078473 | Potato | cytosol | 49.14 | 48.15 |
| Solyc05g008230.2.1 | Tomato | cytosol | 48.51 | 47.54 |
| CDY04747 | Canola | cytosol, golgi | 31.24 | 45.12 |
| Os06t0102700-01 | Rice | plasma membrane | 39.87 | 42.05 |
| Os12t0570000-01 | Rice | cytosol | 33.91 | 41.78 |
| Os06t0726900-00 | Rice | cytosol | 21.98 | 36.84 |
| Os02t0488600-01 | Rice | cytosol, nucleus | 24.18 | 36.41 |
| Os08t0481200-01 | Rice | cytosol | 35.79 | 35.51 |
| Os03t0275900-01 | Rice | cytosol | 39.72 | 34.85 |
| Os07t0587500-01 | Rice | cytosol | 19.47 | 34.25 |
| Os04t0348400-01 | Rice | cytosol | 22.92 | 31.81 |
| Os07t0584900-01 | Rice | plastid | 20.88 | 28.48 |
| Os02t0234300-01 | Rice | cytosol | 25.59 | 28.06 |
| Os03t0435300-00 | Rice | cytosol | 16.33 | 26.0 |
| Os05t0476700-01 | Rice | plastid | 26.69 | 25.11 |
| Os01t0823900-01 | Rice | plastid | 25.75 | 24.12 |
| Os08t0110500-01 | Rice | plasma membrane | 30.93 | 23.91 |
| Os09t0378700-00 | Rice | plasma membrane, plastid | 25.27 | 22.61 |
| Os08t0415600-00 | Rice | cytosol | 25.43 | 22.59 |
| Os01t0884400-01 | Rice | plasma membrane | 29.36 | 22.32 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.2.1.5.2.1 | Gene3D:3.30.40.10 | EntrezGene:4330628 | EMBL:AK102091 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Armadillo | ProteinID:BAD16137.1 | ProteinID:BAF09938.1 | ProteinID:BAS80762.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000225 |
| InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | EnsemblPlantsGene:Os02g0732200 | EnsemblPlants:Os02t0732200-01 | PFAM:PF00514 |
| PFAM:PF04564 | PFscan:PS50176 | PFscan:PS51698 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF52 | UniProt:Q6Z2K3 |
| SMART:SM00185 | SMART:SM00504 | SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniParc:UPI0000358C91 | InterPro:Ubox_domain |
| RefSeq:XP_015623258.1 | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
plant U-box-containing protein 9, U-box protein 9Armadillo-like helical domain containing protein. (Os02t0732200-01)
Coordinates
chr2:+:30518062..30522415
Molecular Weight (calculated)
68971.1 Da
IEP (calculated)
6.732
GRAVY (calculated)
-0.074
Length
637 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEAAAEIV REIAAVGAAD LAAAAEPLRA DCLRLARKVS LLSHLVAEVA EAGAGGGDAD AADSWLGDLV RALQAARRFV ELGRAPARPS RASDQDAVCN
101: NVAVQFKFVT WQLQTVLARL PQSCFQISDE VQEEVDLVRA QLRREMEKKG DIDVNIFSKF HDILALHVST VGSQSEQSHG QPDTPQMENL CNGHLELQNI
201: IMLVSEISGV PKSDAERITS QLIEGLENMR VTDSKKPVSV SQSSDETKAS PETHKKSDAV AIPEDFRCPI SLELMRDPVI VSTGQTYERA FIQRWIDCGN
301: RTCPKTQLKL QNITLTPNYV LRSLILQWCE EKGIEPPTRS KNDGAYLEVG GERVAIETLV RNLSSSSLDE RKSAAAEIRS LAKKSTDNRI LLAESGAISA
401: LVKLLSSKDL KTQEHAVTAL LNLSIYDQNK ELIVVAGAIV PIIQVLRKGG MEARENAAAA IFSLSLIDDN KITIGSTPGA IEALVELLQS GSPRGRKDAA
501: TALFNLCIYQ ANKVRAVRAG ILAPLIQMLQ DSSRNGAIDE ALTILSVLVS HHECKIAIAK AHAIPFLIDL LRSSQARNKE NAAAILLALC KKDAENLACI
601: GRLGAQIPLT ELSKTGTDRA KRKATSLLEH LSKLQVL
101: NVAVQFKFVT WQLQTVLARL PQSCFQISDE VQEEVDLVRA QLRREMEKKG DIDVNIFSKF HDILALHVST VGSQSEQSHG QPDTPQMENL CNGHLELQNI
201: IMLVSEISGV PKSDAERITS QLIEGLENMR VTDSKKPVSV SQSSDETKAS PETHKKSDAV AIPEDFRCPI SLELMRDPVI VSTGQTYERA FIQRWIDCGN
301: RTCPKTQLKL QNITLTPNYV LRSLILQWCE EKGIEPPTRS KNDGAYLEVG GERVAIETLV RNLSSSSLDE RKSAAAEIRS LAKKSTDNRI LLAESGAISA
401: LVKLLSSKDL KTQEHAVTAL LNLSIYDQNK ELIVVAGAIV PIIQVLRKGG MEARENAAAA IFSLSLIDDN KITIGSTPGA IEALVELLQS GSPRGRKDAA
501: TALFNLCIYQ ANKVRAVRAG ILAPLIQMLQ DSSRNGAIDE ALTILSVLVS HHECKIAIAK AHAIPFLIDL LRSSQARNKE NAAAILLALC KKDAENLACI
601: GRLGAQIPLT ELSKTGTDRA KRKATSLLEH LSKLQVL
001: MAGGIVSPAS LLDLIADIVE IPLNTGMFKK DCADLTRRVC LLTHLLEEIR DSTPIDSAAS SSSENDWWSD LVVGLQAAKR LLSTARFQAR DSSDGAAKRI
101: SFQFQCVTWK LEKALSNLPY DLYDISDEVG EQVELARSQL RRAMQRYGSL NSNKFSSALS EPMERDGFSN VIKIKAEEKL ESVSETLHFG EEEEKQSSPP
201: LRRSSSISLA YYLSKDADTD RLDKMVNKNT DESKKSDKLT IPVDFLCPVS LELMKDPVIV ATGQTYERAY IQRWIDCGNL TCPKTQQKLE NFTLTPNYVL
301: RSLISRWCAE HNIEQPAGYI NGRTKNSGDM SVIRALVQRL SSRSTEDRRN AVSEIRSLSK RSTDNRILIA EAGAIPVLVN LLTSEDVATQ ENAITCVLNL
401: SIYENNKELI MFAGAVTSIV QVLRAGTMEA RENAAATLFS LSLADENKII IGGSGAIPAL VDLLENGTPR GKKDAATALF NLCIYHGNKG RAVRAGIVTA
501: LVKMLSDSTR HRMVDEALTI LSVLANNQDA KSAIVKANTL PALIGILQTD QTRNRENAAA ILLSLCKRDT EKLITIGRLG AVVPLMDLSK NGTERGKRKA
601: ISLLELLRKA CQ
101: SFQFQCVTWK LEKALSNLPY DLYDISDEVG EQVELARSQL RRAMQRYGSL NSNKFSSALS EPMERDGFSN VIKIKAEEKL ESVSETLHFG EEEEKQSSPP
201: LRRSSSISLA YYLSKDADTD RLDKMVNKNT DESKKSDKLT IPVDFLCPVS LELMKDPVIV ATGQTYERAY IQRWIDCGNL TCPKTQQKLE NFTLTPNYVL
301: RSLISRWCAE HNIEQPAGYI NGRTKNSGDM SVIRALVQRL SSRSTEDRRN AVSEIRSLSK RSTDNRILIA EAGAIPVLVN LLTSEDVATQ ENAITCVLNL
401: SIYENNKELI MFAGAVTSIV QVLRAGTMEA RENAAATLFS LSLADENKII IGGSGAIPAL VDLLENGTPR GKKDAATALF NLCIYHGNKG RAVRAGIVTA
501: LVKMLSDSTR HRMVDEALTI LSVLANNQDA KSAIVKANTL PALIGILQTD QTRNRENAAA ILLSLCKRDT EKLITIGRLG AVVPLMDLSK NGTERGKRKA
601: ISLLELLRKA CQ
Arabidopsis Description
PUB11RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178WCR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.