Factsheet for Os02t0488600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06804	Sorghum	cytosol	82.27	75.0
Zm00001d016501_P001	Maize	cytosol	77.31	70.32
GSMUA_Achr6P06560_001	Banana	cytosol	58.16	65.95
GSMUA_Achr10P...	Banana	cytosol	55.56	62.83
Os04t0348400-01	Rice	cytosol	66.19	61.0
GSMUA_Achr9P01670_001	Banana	cytosol	65.01	59.01
VIT_04s0043g00840.t01	Wine grape	cytosol	51.3	47.69
KRH68828	Soybean	cytosol	47.99	47.21
VIT_00s0524g00030.t01	Wine grape	cytosol	48.94	46.1
KRG97080	Soybean	cytosol, nucleus	47.04	45.23
PGSC0003DMT400016998	Potato	cytosol	47.99	45.21
Solyc09g056450.2.1	Tomato	cytosol	47.28	44.54
AT3G07360.1	Thale cress	cytosol	48.23	44.35
Bra001247.1-P	Field mustard	cytosol	47.75	44.3
CDX74050	Canola	cytosol	47.75	44.3
CDY08002	Canola	cytosol	47.28	43.96
CDY71737	Canola	cytosol	47.99	43.94
Bra029642.1-P	Field mustard	cytosol	47.99	43.94
CDY28059	Canola	cytosol	47.52	43.51
KRG99581	Soybean	cytosol	47.04	43.17
KRG92593	Soybean	cytosol	44.68	42.66
Bra040374.1-P	Field mustard	cytosol	45.39	42.57
KRH46608	Soybean	cytosol	46.34	42.52
Solyc04g050780.1.1	Tomato	cytosol	39.24	38.52
Solyc04g050770.1.1	Tomato	cytosol	39.95	38.15
PGSC0003DMT400039084	Potato	cytosol	39.24	37.47
PGSC0003DMT400011486	Potato	cytosol	30.97	36.69
AT5G18320.1	Thale cress	cytosol	36.41	33.62
CDY68352	Canola	cytosol	34.75	32.24
CDY38506	Canola	cytosol	33.57	31.14
Os06t0726900-00	Rice	cytosol	27.42	30.53
AT5G18330.1	Thale cress	cytosol	30.26	28.76
Os12t0570000-01	Rice	cytosol	34.52	28.24
AT5G18340.1	Thale cress	nucleus	30.26	28.07
Os07t0587500-01	Rice	cytosol	23.4	27.35
CDX70810	Canola	cytosol	30.02	26.91
Bra006451.1-P	Field mustard	cytosol	28.84	26.12
Os06t0102700-01	Rice	plasma membrane	36.64	25.66
Os02t0732200-01	Rice	cytosol	36.41	24.18
Os08t0481200-01	Rice	cytosol	35.93	23.68
CDY51235	Canola	extracellular, golgi	28.61	23.31
Os07t0584900-01	Rice	plastid	24.82	22.48
Os03t0275900-01	Rice	cytosol	36.64	21.35
Os03t0435300-00	Rice	cytosol	19.86	21.0
Os02t0234300-01	Rice	cytosol	28.84	21.0
Os01t0823900-01	Rice	plastid	31.44	19.56
Os05t0476700-01	Rice	plastid	30.26	18.91
Os08t0110500-01	Rice	plasma membrane	33.81	17.35
Os01t0884400-01	Rice	plasma membrane	33.33	16.83
Os09t0378700-00	Rice	plasma membrane, plastid	24.59	14.61
Os08t0415600-00	Rice	cytosol	21.99	12.97
Bra002153.1-P	Field mustard	cytosol	35.22	10.91
CDX70805	Canola	cytosol	29.31	8.05
CDY51234	Canola	cytosol	30.73	7.85
Bra006452.1-P	Field mustard	cytosol	30.73	7.83

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
ProteinID:BAH91695.1	ProteinID:BAS78728.1	UniProt:C7IYS0	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083
EnsemblPlantsGene:Os02g0488600	EnsemblPlants:Os02t0488600-01	PFAM:PF00514	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR23315
PANTHER:PTHR23315:SF75	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI0001B6659F	InterPro:Ubox_domain
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

plant U-box-containing protein 8, U-box protein 8Armadillo-like helical domain containing protein. (Os02t0488600-01)

Coordinates

chr2:-:16981502..16985338

Molecular Weight (calculated)

46183.9 Da

IEP (calculated)

6.079

GRAVY (calculated)

-0.301

Length

423 amino acids

Sequence
(BLAST)

001: EAASALAALR DAELGPPPKD RPGAGAERRR SGHAEAAAVP EQFLCPISSE IMRDPVVLAS GQTYDRRFIQ EWLSAGNRTC PQTQQVLSNT ILIPNHLVRS
101: MIAQWCTENG IALSPLENQE EDLVTNNERK SFSELFDRIS SSSNISEKRQ AIKDLRLLTK RNSSFRAVIG ENPDSISQMI SAVSNPELES NSEVLEDTVT
201: TILNLSIHES NKKIIGDDTK AITFLISALQ SGTMEARSNA AAAIFSLSAL DSNKAKIGES GAMRPLVDLL EHGSMTAKKD AASAIFSLCK LHENKSRATK
301: SGVIDVVLKA ISDESLTDES LTILALLSSD HETVEEIGET GGVPCMLHII KDDQCKRNKE NAVAVLFSIC MYDRTKLREV VEDENLNGSL AWLAQNGTSR
401: ARRKAAGILD KLKRTIHKTH YSC

Best Arabidopsis Sequence Match ( AT3G07360.1 )
(BLAST)

001: MAKTGVFDSD PTAIAKAKEL KREMKKLLIK IDDEDDLGVQ TIDQLQDALS ALREATMRKM AKSSSLEMLE TVSCPEEFRC PLSNELMRDP VVLASGQTYD
101: KLFIQKWLSS GNRTCPKTQQ VLPHTALTPN LLIREMISKW CKKNGLETKS QYHPNLVNED ETVTRSDREI FNSLLCKVSS SNLQDQKSAA KELRLLTRKG
201: TEFRALFGES PDEITRLVNP LLHGSNPDEK LQEDVVTTLL NISIHDDSNK KLVCENPNVI PLLIDALRRG TVATRSNAAA AIFTLSALDS NKVLIGKSGI
301: LKPLIDLLEE GNPLAIKDVA AAIFTLCIAH ENRSRAVRDG AVRVLGKKIS NGLYVDELLA ILAMLVTHWK AVEELGELGG VSWLLKITRE SECKRNKENA
401: IVILHTICFS DRTKWKEIKE EENAHGTITK LSREGTSRAQ RKANGILDRL RKAMNLTHTA

Arabidopsis Description

PUB9RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VJC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.