Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0349000-01 | Rice | cytosol | 76.61 | 73.79 |
| EER92274 | Sorghum | cytosol | 76.61 | 73.46 |
| Zm00001d029142_P007 | Maize | cytosol | 76.01 | 73.05 |
| HORVU5Hr1G021240.1 | Barley | cytosol | 75.66 | 73.04 |
| TraesCS4B01G153500.3 | Wheat | cytosol | 75.18 | 72.58 |
| TraesCS4A01G141000.3 | Wheat | cytosol | 75.18 | 72.58 |
| TraesCS4D01G154300.3 | Wheat | cytosol | 75.06 | 72.55 |
| VIT_08s0007g08940.t01 | Wine grape | cytosol | 71.72 | 69.64 |
| PGSC0003DMT400077823 | Potato | cytosol | 10.26 | 69.35 |
| Zm00001d034299_P001 | Maize | cytosol | 13.01 | 68.99 |
| KRH09759 | Soybean | cytosol, endoplasmic reticulum, nucleus | 69.45 | 67.6 |
| KRH23559 | Soybean | nucleus | 69.45 | 67.6 |
| Zm00001d046306_P001 | Maize | extracellular | 11.81 | 66.0 |
| Solyc04g016240.2.1 | Tomato | cytosol, nucleus, plastid | 67.66 | 65.78 |
| PGSC0003DMT400033102 | Potato | cytosol | 64.08 | 63.18 |
| PGSC0003DMT400077824 | Potato | cytosol | 13.37 | 62.22 |
| AT2G41620.1 | Thale cress | nucleus | 63.72 | 62.02 |
| CDY14781 | Canola | cytosol | 63.84 | 61.99 |
| CDY06913 | Canola | cytosol | 63.84 | 61.99 |
| Bra016924.1-P | Field mustard | cytosol | 63.72 | 61.88 |
| AT3G57350.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 62.05 | 60.47 |
| CDY06112 | Canola | cytosol | 61.81 | 60.02 |
| CDX72047 | Canola | cytosol | 61.46 | 59.74 |
| Bra007321.1-P | Field mustard | cytosol | 61.46 | 59.74 |
Protein Annotations
| MapMan:23.5.1.1.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 | GO:GO:0006810 | GO:GO:0006913 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0017056 | GO:GO:0051028 | EnsemblPlantsGene:GSMUA_Achr2G04240_001 |
| EnsemblPlants:GSMUA_Achr2P04240_001 | EnsemblPlants:GSMUA_Achr2T04240_001 | UniProt:M0S515 | InterPro:Nucleoporin_int_Nup93/Nic96 | PFAM:PF04097 | PANTHER:PTHR11225 |
| UniParc:UPI000296519E | SEG:seg | : | : | : | : |
Description
Uncharacterized protein At2g41620 [Source:GMGC_GENE;Acc:GSMUA_Achr2G04240_001]
Coordinates
chr2:-:9687409..9702268
Molecular Weight (calculated)
93911.7 Da
IEP (calculated)
7.302
GRAVY (calculated)
-0.305
Length
838 amino acids
Sequence
(BLAST)
(BLAST)
001: MANDQEMSGW TDLLHSSTKL LEHAGPSAHF PSLQRNLDQL ESLSKKLKSK TIRAEAPSQS ISATSRLLAR EGINAERLAR DLKSFELKTT FEDVFPSEAT
101: TVEEYLQQIH EMAMVSSIQE AQKDNLRSFN DHMMQVLEED WQKEKRDFLQ SLSRLSTLPR GNSSILSIMP MANKSIIEKK ASVYAEILRN LNDARGRGLH
201: FKPATAFRDA YESMGLDFSG MRSVTMQKIW HLIQALVGEY SNNRQKFSRK MSLVIGARRH LEWGHEKYIL DMIKTHPSQA ALGGAVGNLE KIQAFLRVRL
301: RDHGMLDFDT TDIRRQPPID TTWQQIYYCL RTGYYDEAKK VAESSRAAHQ FAPQLAEWIA SGGSVSPETA AVASEECEKL LRMGDRAGRP GYDRKKLLLY
401: AIISGSRRQV ERLLRDVPSL FGTIEDFLWF KLSAIRDCPG GSSSIVLSEG LVPYNLDDLQ GYLNKFEPSY YTKNGKDPLV YPYVLLLSIQ FLPAVLYLFK
501: EVGEEGYNVD AVHISIALAD NGVLSDGIGT DRKIGVMDAC AEVASIIRQY GSVYLRQGNL ELALEYYAQA AAAMGGGEVS WIGRGSSDQQ RQRNMMLRQL
601: LTEVLLQDGG ISLLLGPRGT GEEGALSKYI MDWNSRQQFL LEAARQCQEA GLYDKSVEIH KRVGAFSVAL ETVNKCLSDV ICAMSRGRLD GESRAASLIQ
701: SGNDILENFK YSSGVSLQEK EPVSEQQTVL RQLEAILHIS KLARAGQHVD ALREIIKIPF LPLNPRVPDV HYDVFQKLSP HVQACVPHLL KITLNCLDNV
801: KDTDGTLRAL KSKIANLVAN NMNRNWPQDL IEKVAQSI
101: TVEEYLQQIH EMAMVSSIQE AQKDNLRSFN DHMMQVLEED WQKEKRDFLQ SLSRLSTLPR GNSSILSIMP MANKSIIEKK ASVYAEILRN LNDARGRGLH
201: FKPATAFRDA YESMGLDFSG MRSVTMQKIW HLIQALVGEY SNNRQKFSRK MSLVIGARRH LEWGHEKYIL DMIKTHPSQA ALGGAVGNLE KIQAFLRVRL
301: RDHGMLDFDT TDIRRQPPID TTWQQIYYCL RTGYYDEAKK VAESSRAAHQ FAPQLAEWIA SGGSVSPETA AVASEECEKL LRMGDRAGRP GYDRKKLLLY
401: AIISGSRRQV ERLLRDVPSL FGTIEDFLWF KLSAIRDCPG GSSSIVLSEG LVPYNLDDLQ GYLNKFEPSY YTKNGKDPLV YPYVLLLSIQ FLPAVLYLFK
501: EVGEEGYNVD AVHISIALAD NGVLSDGIGT DRKIGVMDAC AEVASIIRQY GSVYLRQGNL ELALEYYAQA AAAMGGGEVS WIGRGSSDQQ RQRNMMLRQL
601: LTEVLLQDGG ISLLLGPRGT GEEGALSKYI MDWNSRQQFL LEAARQCQEA GLYDKSVEIH KRVGAFSVAL ETVNKCLSDV ICAMSRGRLD GESRAASLIQ
701: SGNDILENFK YSSGVSLQEK EPVSEQQTVL RQLEAILHIS KLARAGQHVD ALREIIKIPF LPLNPRVPDV HYDVFQKLSP HVQACVPHLL KITLNCLDNV
801: KDTDGTLRAL KSKIANLVAN NMNRNWPQDL IEKVAQSI
001: MANDQEMSGW TDLLHSSSKL LEQAAPSSQF PPLQRNLDQL EALSKKLKAK TLRNEAPSQS IAATRLLARE GINAEQLARD LKSFELKTTF EDVFPAEATS
101: VEEYLQQVHE MAMVSAIQEA QKDNVRSFND YMMKVLEEDW RKEKRDFLQS LSRISMLPKT NMIDTSREAH AGQLVPVGSS PRVSSTPGKE LVALANIPIH
201: EKKAYVYGEV VKKLNTSRER GMPFRPAMCF KDAYDTLGAE VTRGKSVNMQ KIWQLVQAIT GEDSAVRQGV SKRMALAIGA RHHLQHGHEK FIMDTIQTHP
301: TQAALGGSVG NLQRIRAFLR IRLRDYGVLD FDSTDARRQP PVDTTWQQIY FCLRTGYYEE AREIARSTRS SQQFAPLLTE WITTDGMVAA ESAAIASEEC
401: EKMLRMGDRL GRTAYDKKKL LLYTIISGSR RQIERILRDL STLFNTIEDF LWFKLSCIRD VTGGSSSVVL NDGLAPYSLD DLQAYLNKFE PSYYTKNGKD
501: PLVYPYVLLL SVQLLPAIMH LSKEAGDGGY NIDAVHIAIS LVDHSVLSEG SGTGHKLSVM DSNAEASSMI RQYGSMFLHH GDLQMTVEYY AQAAATVGGG
601: QLAWSGRSNV DQQRQRNLML KQLLTEILLR ERGIYFLLGA RGSGEEGQLG RFFPDSRLRQ QFLVEAAHQC QEAGLYDKSI ELQKRVGAFS AALETINKCL
701: SEAICSLARG RLDGESRTSG LILAGNDILE TYKYYPEVSL QERERVMEQE TILRELEAIL SIHKLGRLGN HLDALREIAK LPFLHLDPRM PDATADVFQS
801: ASPYFQTCVP DLLKVALTCL DNVPDTDGSI RAMRSKIAGF LASNTHRNWP RDLYEKVARS F
101: VEEYLQQVHE MAMVSAIQEA QKDNVRSFND YMMKVLEEDW RKEKRDFLQS LSRISMLPKT NMIDTSREAH AGQLVPVGSS PRVSSTPGKE LVALANIPIH
201: EKKAYVYGEV VKKLNTSRER GMPFRPAMCF KDAYDTLGAE VTRGKSVNMQ KIWQLVQAIT GEDSAVRQGV SKRMALAIGA RHHLQHGHEK FIMDTIQTHP
301: TQAALGGSVG NLQRIRAFLR IRLRDYGVLD FDSTDARRQP PVDTTWQQIY FCLRTGYYEE AREIARSTRS SQQFAPLLTE WITTDGMVAA ESAAIASEEC
401: EKMLRMGDRL GRTAYDKKKL LLYTIISGSR RQIERILRDL STLFNTIEDF LWFKLSCIRD VTGGSSSVVL NDGLAPYSLD DLQAYLNKFE PSYYTKNGKD
501: PLVYPYVLLL SVQLLPAIMH LSKEAGDGGY NIDAVHIAIS LVDHSVLSEG SGTGHKLSVM DSNAEASSMI RQYGSMFLHH GDLQMTVEYY AQAAATVGGG
601: QLAWSGRSNV DQQRQRNLML KQLLTEILLR ERGIYFLLGA RGSGEEGQLG RFFPDSRLRQ QFLVEAAHQC QEAGLYDKSI ELQKRVGAFS AALETINKCL
701: SEAICSLARG RLDGESRTSG LILAGNDILE TYKYYPEVSL QERERVMEQE TILRELEAIL SIHKLGRLGN HLDALREIAK LPFLHLDPRM PDATADVFQS
801: ASPYFQTCVP DLLKVALTCL DNVPDTDGSI RAMRSKIAGF LASNTHRNWP RDLYEKVARS F
Arabidopsis Description
NUP93ANuclear pore complex protein NUP93A [Source:UniProtKB/Swiss-Prot;Acc:O22224]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.